RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
PHGDH-227ENST00000641811 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-227ENST00000641811 GJA3Q9Y6H8 435 aa21.85■■□□□ 1.09
PHGDH-227ENST00000641811 KIF16BQ96L93 1317 aa21.84■■□□□ 1.09
PHGDH-227ENST00000641811 ANKRD18BA2A2Z9 1011 aa21.84■■□□□ 1.09
PHGDH-227ENST00000641811 TOMM70O94826 608 aa21.84■■□□□ 1.09
PHGDH-227ENST00000641811 IFIT5Q13325 482 aaKnown RBP21.84■■□□□ 1.09
PHGDH-227ENST00000641811 FRAT1Q92837 279 aaPredicted RBP21.84■■□□□ 1.09
PHGDH-227ENST00000641811 GGA1Q9UJY5 639 aa21.84■■□□□ 1.09
PHGDH-227ENST00000641811 ZNRF3Q9ULT6 936 aa21.84■■□□□ 1.09
PHGDH-227ENST00000641811 TNNQ9UQP3 1299 aa21.84■■□□□ 1.09
PHGDH-227ENST00000641811 CCT4P50991 539 aaKnown RBP21.83■■□□□ 1.09
PHGDH-227ENST00000641811 GPC2Q8N158 579 aa21.83■■□□□ 1.09
PHGDH-227ENST00000641811 L3MBTL3Q96JM7 780 aaPredicted RBP21.83■■□□□ 1.09
PHGDH-227ENST00000641811 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.09
PHGDH-227ENST00000641811 XDHP47989 1333 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 CXCL9Q07325 125 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 DOK7Q18PE1 504 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 ZNF594Q96JF6 807 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-227ENST00000641811 EYA3Q99504 573 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 MPHOSPH8Q99549 860 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 DBNDD1Q9H9R9 158 aa21.82■■□□□ 1.08
PHGDH-227ENST00000641811 YDJCA8MPS7 323 aa21.81■■□□□ 1.08
PHGDH-227ENST00000641811 ANKRD44Q8N8A2 993 aa21.81■■□□□ 1.08
PHGDH-227ENST00000641811 RAD17O75943 681 aa21.8■■□□□ 1.08
PHGDH-227ENST00000641811 CCDC57Q2TAC2 916 aa21.8■■□□□ 1.08
PHGDH-227ENST00000641811 RBM46Q8TBY0 533 aaKnown RBP21.8■■□□□ 1.08
PHGDH-227ENST00000641811 ZC3H12CQ9C0D7 883 aaKnown RBP21.8■■□□□ 1.08
PHGDH-227ENST00000641811 IPO8O15397 1037 aaKnown RBP21.79■■□□□ 1.08
PHGDH-227ENST00000641811 TRIM27P14373 513 aa21.79■■□□□ 1.08
PHGDH-227ENST00000641811 ATP2B4P23634 1241 aa21.79■■□□□ 1.08
PHGDH-227ENST00000641811 KCNQ5Q9NR82 932 aa21.79■■□□□ 1.08
PHGDH-227ENST00000641811 ECE2O60344 883 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 POTEIP0CG38 1075 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 POTEJP0CG39 1038 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 CHRNDQ07001 517 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 RABL6Q3YEC7 729 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-227ENST00000641811 TAF7LQ5H9L4 462 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 ATF7IPQ6VMQ6 1270 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-227ENST00000641811 CLUAP1Q96AJ1 413 aa21.78■■□□□ 1.08
PHGDH-227ENST00000641811 TAF1DQ9H5J8 278 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-227ENST00000641811 IQCA1LA6NCM1 817 aa21.77■■□□□ 1.08
PHGDH-227ENST00000641811 INTS3Q68E01 1043 aaKnown RBP21.77■■□□□ 1.08
PHGDH-227ENST00000641811 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.08
PHGDH-227ENST00000641811 HACL1Q9UJ83 578 aa21.77■■□□□ 1.08
PHGDH-227ENST00000641811 SNAP23O00161 211 aa21.76■■□□□ 1.07
PHGDH-227ENST00000641811 TAF5LO75529 589 aa21.76■■□□□ 1.07
PHGDH-227ENST00000641811 SCNN1DP51172 638 aa21.76■■□□□ 1.07
PHGDH-227ENST00000641811 LDHAL6AQ6ZMR3 332 aa21.76■■□□□ 1.07
PHGDH-227ENST00000641811 PUS3Q9BZE2 481 aaKnown RBP21.76■■□□□ 1.07
PHGDH-227ENST00000641811 ANKRD2Q9GZV1 360 aa21.76■■□□□ 1.07
PHGDH-227ENST00000641811 G3V3G9 751 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 UBTFL1P0CB47 393 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-227ENST00000641811 EPHX2P34913 555 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 EPS15P42566 896 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 TNIP1Q15025 636 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 DCAF8Q5TAQ9 597 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 ZKSCAN2Q63HK3 967 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 MEIS3Q99687 375 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 SCN4AP35499 1836 aa21.75■■□□□ 1.07
PHGDH-227ENST00000641811 KLRK1P26718 216 aa21.74■■□□□ 1.07
PHGDH-227ENST00000641811 GMPSP49915 693 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-227ENST00000641811 EAPPQ56P03 285 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-227ENST00000641811 TXNRD3Q86VQ6 643 aa21.74■■□□□ 1.07
PHGDH-227ENST00000641811 CNNM1Q9NRU3 951 aa21.74■■□□□ 1.07
PHGDH-227ENST00000641811 LEMD3Q9Y2U8 911 aa21.74■■□□□ 1.07
PHGDH-227ENST00000641811 ZNF804BA4D1E1 1349 aa21.74■■□□□ 1.07
PHGDH-227ENST00000641811 PSMD14O00487 310 aa21.73■■□□□ 1.07
PHGDH-227ENST00000641811 PLIN1O60240 522 aa21.73■■□□□ 1.07
PHGDH-227ENST00000641811 LMOD1P29536 600 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-227ENST00000641811 SMC1BQ8NDV3 1235 aa21.73■■□□□ 1.07
PHGDH-227ENST00000641811 KLHDC4Q8TBB5 520 aa21.73■■□□□ 1.07
PHGDH-227ENST00000641811 ZBTB12Q9Y330 459 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-227ENST00000641811 MED23Q9ULK4 1368 aa21.73■■□□□ 1.07
PHGDH-227ENST00000641811 KCNJ4P48050 445 aa21.72■■□□□ 1.07
PHGDH-227ENST00000641811 FSTL1Q12841 308 aa21.72■■□□□ 1.07
PHGDH-227ENST00000641811 LRRFIP2Q9Y608 721 aaKnown RBP21.72■■□□□ 1.07
PHGDH-227ENST00000641811 HSPA6P17066 643 aa21.71■■□□□ 1.07
PHGDH-227ENST00000641811 TMEM57Q8N5G2 664 aa21.71■■□□□ 1.07
PHGDH-227ENST00000641811 GPRC5DQ9NZD1 345 aa21.71■■□□□ 1.07
PHGDH-227ENST00000641811 SCN9AQ15858 1988 aa21.7■■□□□ 1.07
PHGDH-227ENST00000641811 SHTN1A0MZ66 631 aa21.7■■□□□ 1.06
PHGDH-227ENST00000641811 LRRC24Q50LG9 513 aa21.7■■□□□ 1.06
PHGDH-227ENST00000641811 CHADLQ6NUI6 762 aa21.7■■□□□ 1.06
PHGDH-227ENST00000641811 RFX5P48382 616 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-227ENST00000641811 CLEC11AQ9Y240 323 aa21.69■■□□□ 1.06
PHGDH-227ENST00000641811 RIPOR2Q9Y4F9 1068 aa21.69■■□□□ 1.06
PHGDH-227ENST00000641811 A0A1B0GUL6 1792 aa21.69■■□□□ 1.06
PHGDH-227ENST00000641811 GNAI3P08754 354 aa21.68■■□□□ 1.06
PHGDH-227ENST00000641811 RLBP1P12271 317 aa21.68■■□□□ 1.06
PHGDH-227ENST00000641811 PNMA8AQ86V59 439 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-227ENST00000641811 LDHDQ86WU2 507 aa21.68■■□□□ 1.06
PHGDH-227ENST00000641811 IRS2Q9Y4H2 1338 aa21.68■■□□□ 1.06
PHGDH-227ENST00000641811 VIL1P09327 827 aaKnown RBP21.67■■□□□ 1.06
PHGDH-227ENST00000641811 PODNQ7Z5L7 613 aa21.67■■□□□ 1.06
PHGDH-227ENST00000641811 COA1Q9GZY4 146 aa21.67■■□□□ 1.06
PHGDH-227ENST00000641811 CNOT7Q9UIV1 285 aaKnown RBP21.67■■□□□ 1.06
PHGDH-227ENST00000641811 PTPN12Q05209 780 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms