RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 CXCL9Q07325 125 aa28.46■■■□□ 2.15
GRAMD1B-217ENST00000640939 EYA3Q99504 573 aa28.46■■■□□ 2.15
GRAMD1B-217ENST00000640939 BSDC1Q9NW68 430 aaPredicted RBP28.46■■■□□ 2.15
GRAMD1B-217ENST00000640939 GGA1Q9UJY5 639 aa28.46■■■□□ 2.15
GRAMD1B-217ENST00000640939 CHMP3Q9Y3E7 222 aa28.46■■■□□ 2.15
GRAMD1B-217ENST00000640939 IGHMBP2P38935 993 aaKnown RBP28.45■■■□□ 2.14
GRAMD1B-217ENST00000640939 DBNDD1Q9H9R9 158 aa28.45■■■□□ 2.14
GRAMD1B-217ENST00000640939 XDHP47989 1333 aa28.44■■■□□ 2.14
GRAMD1B-217ENST00000640939 YDJCA8MPS7 323 aa28.44■■■□□ 2.14
GRAMD1B-217ENST00000640939 RAD17O75943 681 aa28.44■■■□□ 2.14
GRAMD1B-217ENST00000640939 NOB1Q9ULX3 412 aaKnown RBP28.44■■■□□ 2.14
GRAMD1B-217ENST00000640939 MINPP1Q9UNW1 487 aa28.44■■■□□ 2.14
GRAMD1B-217ENST00000640939 NBPF7P0C2Y1 421 aaPredicted RBP28.43■■■□□ 2.14
GRAMD1B-217ENST00000640939 EPHX2P34913 555 aa28.43■■■□□ 2.14
GRAMD1B-217ENST00000640939 RARSP54136 660 aaKnown RBP28.43■■■□□ 2.14
GRAMD1B-217ENST00000640939 DOK7Q18PE1 504 aa28.43■■■□□ 2.14
GRAMD1B-217ENST00000640939 LMBR1LQ6UX01 489 aa28.43■■■□□ 2.14
GRAMD1B-217ENST00000640939 ANKRD18BA2A2Z9 1011 aa28.42■■■□□ 2.14
GRAMD1B-217ENST00000640939 SCNN1DP51172 638 aa28.42■■■□□ 2.14
GRAMD1B-217ENST00000640939 EAPPQ56P03 285 aaPredicted RBP28.42■■■□□ 2.14
GRAMD1B-217ENST00000640939 CIAPIN1Q6FI81 312 aa28.42■■■□□ 2.14
GRAMD1B-217ENST00000640939 SUCLG2Q96I99 432 aa28.42■■■□□ 2.14
GRAMD1B-217ENST00000640939 WTIPA6NIX2 430 aaPredicted RBP28.41■■■□□ 2.14
GRAMD1B-217ENST00000640939 MPHOSPH8Q99549 860 aa28.41■■■□□ 2.14
GRAMD1B-217ENST00000640939 ZC3H12CQ9C0D7 883 aaKnown RBP28.41■■■□□ 2.14
GRAMD1B-217ENST00000640939 ECE2O60344 883 aa28.4■■■□□ 2.14
GRAMD1B-217ENST00000640939 LMOD1P29536 600 aaPredicted RBP28.4■■■□□ 2.14
GRAMD1B-217ENST00000640939 IFIT5Q13325 482 aaKnown RBP28.4■■■□□ 2.14
GRAMD1B-217ENST00000640939 UTYO14607 1347 aa28.4■■■□□ 2.14
GRAMD1B-217ENST00000640939 ATP2B4P23634 1241 aa28.39■■■□□ 2.14
GRAMD1B-217ENST00000640939 EPS15P42566 896 aa28.39■■■□□ 2.14
GRAMD1B-217ENST00000640939 CHADLQ6NUI6 762 aa28.39■■■□□ 2.14
GRAMD1B-217ENST00000640939 KAZALD1Q96I82 304 aa28.39■■■□□ 2.14
GRAMD1B-217ENST00000640939 GMPSP49915 693 aaPredicted RBP28.38■■■□□ 2.13
GRAMD1B-217ENST00000640939 BRPF1P55201 1214 aaPredicted RBP28.38■■■□□ 2.13
GRAMD1B-217ENST00000640939 TNIP1Q15025 636 aa28.38■■■□□ 2.13
GRAMD1B-217ENST00000640939 KCNQ5Q9NR82 932 aa28.38■■■□□ 2.13
GRAMD1B-217ENST00000640939 APLP1P51693 650 aa28.37■■■□□ 2.13
GRAMD1B-217ENST00000640939 LDHDQ86WU2 507 aa28.37■■■□□ 2.13
GRAMD1B-217ENST00000640939 CLEC11AQ9Y240 323 aa28.37■■■□□ 2.13
GRAMD1B-217ENST00000640939 G3V3G9 751 aa28.36■■■□□ 2.13
GRAMD1B-217ENST00000640939 CCT4P50991 539 aaKnown RBP28.36■■■□□ 2.13
GRAMD1B-217ENST00000640939 CCDC57Q2TAC2 916 aa28.36■■■□□ 2.13
GRAMD1B-217ENST00000640939 DCAF8Q5TAQ9 597 aa28.36■■■□□ 2.13
GRAMD1B-217ENST00000640939 ZNF594Q96JF6 807 aaPredicted RBP28.36■■■□□ 2.13
GRAMD1B-217ENST00000640939 PSMD14O00487 310 aa28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 PNMA8AQ86V59 439 aaPredicted RBP28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 API5Q9BZZ5 524 aaKnown RBP28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 USP44Q9H0E7 712 aa28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 BICC1Q9H694 974 aaKnown RBP28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 GPRC5DQ9NZD1 345 aa28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 ZBED9Q6R2W3 1325 aa28.35■■■□□ 2.13
GRAMD1B-217ENST00000640939 CHRNDQ07001 517 aa28.34■■■□□ 2.13
GRAMD1B-217ENST00000640939 TAF7LQ5H9L4 462 aa28.34■■■□□ 2.13
GRAMD1B-217ENST00000640939 ANKRD2Q9GZV1 360 aa28.34■■■□□ 2.13
GRAMD1B-217ENST00000640939 ADAMTSL1Q8N6G6 1762 aa28.34■■■□□ 2.13
GRAMD1B-217ENST00000640939 CEP350Q5VT06 3117 aa28.34■■■□□ 2.13
GRAMD1B-217ENST00000640939 SCN9AQ15858 1988 aa28.33■■■□□ 2.13
GRAMD1B-217ENST00000640939 BCAR3O75815 825 aa28.33■■■□□ 2.13
GRAMD1B-217ENST00000640939 HTRA3P83110 453 aa28.33■■■□□ 2.13
GRAMD1B-217ENST00000640939 ZBTB12Q9Y330 459 aaPredicted RBP28.33■■■□□ 2.13
GRAMD1B-217ENST00000640939 ANKRD44Q8N8A2 993 aa28.32■■■□□ 2.12
GRAMD1B-217ENST00000640939 LEMD3Q9Y2U8 911 aa28.32■■■□□ 2.12
GRAMD1B-217ENST00000640939 KIF16BQ96L93 1317 aa28.32■■■□□ 2.12
GRAMD1B-217ENST00000640939 MED23Q9ULK4 1368 aa28.32■■■□□ 2.12
GRAMD1B-217ENST00000640939 HELBQ8NG08 1087 aaPredicted RBP28.31■■■□□ 2.12
GRAMD1B-217ENST00000640939 ZNF804BA4D1E1 1349 aa28.31■■■□□ 2.12
GRAMD1B-217ENST00000640939 SHTN1A0MZ66 631 aa28.3■■■□□ 2.12
GRAMD1B-217ENST00000640939 TAF5LO75529 589 aa28.3■■■□□ 2.12
GRAMD1B-217ENST00000640939 A0A1B0GUL6 1792 aa28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 KLRK1P26718 216 aa28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 KCNJ4P48050 445 aa28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 RABL6Q3YEC7 729 aaPredicted RBP28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 MAP1SQ66K74 1059 aaPredicted RBP28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 LDHAL6AQ6ZMR3 332 aa28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 TXNRD3Q86VQ6 643 aa28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 CNNM1Q9NRU3 951 aa28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 ADARB2Q9NS39 739 aaKnown RBP28.29■■■□□ 2.12
GRAMD1B-217ENST00000640939 SNAP23O00161 211 aa28.28■■■□□ 2.12
GRAMD1B-217ENST00000640939 USP50Q70EL3 339 aaPredicted RBP28.28■■■□□ 2.12
GRAMD1B-217ENST00000640939 ARHGAP45Q92619 1136 aa28.28■■■□□ 2.12
GRAMD1B-217ENST00000640939 FRAT1Q92837 279 aaPredicted RBP28.28■■■□□ 2.12
GRAMD1B-217ENST00000640939 CNOT7Q9UIV1 285 aaKnown RBP28.28■■■□□ 2.12
GRAMD1B-217ENST00000640939 MICALL2Q8IY33 904 aa28.27■■■□□ 2.12
GRAMD1B-217ENST00000640939 TNNQ9UQP3 1299 aa28.27■■■□□ 2.12
GRAMD1B-217ENST00000640939 PLIN1O60240 522 aa28.26■■■□□ 2.11
GRAMD1B-217ENST00000640939 PUS3Q9BZE2 481 aaKnown RBP28.26■■■□□ 2.11
GRAMD1B-217ENST00000640939 VIL1P09327 827 aaKnown RBP28.25■■■□□ 2.11
GRAMD1B-217ENST00000640939 PODNQ7Z5L7 613 aa28.25■■■□□ 2.11
GRAMD1B-217ENST00000640939 CNTROBQ8N137 903 aa28.25■■■□□ 2.11
GRAMD1B-217ENST00000640939 DPF2Q92785 391 aa28.25■■■□□ 2.11
GRAMD1B-217ENST00000640939 PSME4Q14997 1843 aa28.25■■■□□ 2.11
GRAMD1B-217ENST00000640939 IPO8O15397 1037 aaKnown RBP28.24■■■□□ 2.11
GRAMD1B-217ENST00000640939 ITGBL1O95965 494 aaPredicted RBP28.24■■■□□ 2.11
GRAMD1B-217ENST00000640939 UBTFL1P0CB47 393 aaPredicted RBP28.24■■■□□ 2.11
GRAMD1B-217ENST00000640939 TRIM27P14373 513 aa28.24■■■□□ 2.11
GRAMD1B-217ENST00000640939 TRPM4Q8TD43 1214 aa28.24■■■□□ 2.11
GRAMD1B-217ENST00000640939 H7C1D1 291 aa28.23■■■□□ 2.11
GRAMD1B-217ENST00000640939 RPS12P25398 132 aaKnown RBP28.23■■■□□ 2.11
GRAMD1B-217ENST00000640939 COA1Q9GZY4 146 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms