RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ZC3H12CQ9C0D7 883 aaKnown RBP32.1■■■□□ 2.73
VEGFA-230ENST00000640482 GREM2Q9H772 168 aa32.1■■■□□ 2.73
VEGFA-230ENST00000640482 DBNDD1Q9H9R9 158 aa32.1■■■□□ 2.73
VEGFA-230ENST00000640482 PLA2G12BQ9BX93 195 aa32.09■■■□□ 2.73
VEGFA-230ENST00000640482 MYH3P11055 1940 aa32.08■■■□□ 2.73
VEGFA-230ENST00000640482 XDHP47989 1333 aa32.07■■■□□ 2.72
VEGFA-230ENST00000640482 E9PSI1 815 aa32.07■■■□□ 2.72
VEGFA-230ENST00000640482 F6X3S4 739 aa32.07■■■□□ 2.72
VEGFA-230ENST00000640482 ECE2O60344 883 aa32.07■■■□□ 2.72
VEGFA-230ENST00000640482 GPR101Q96P66 508 aaPredicted RBP32.07■■■□□ 2.72
VEGFA-230ENST00000640482 CCER2I3L3R5 266 aa32.06■■■□□ 2.72
VEGFA-230ENST00000640482 CASP7P55210 303 aa32.06■■■□□ 2.72
VEGFA-230ENST00000640482 DOK7Q18PE1 504 aa32.06■■■□□ 2.72
VEGFA-230ENST00000640482 BSDC1Q9NW68 430 aaPredicted RBP32.06■■■□□ 2.72
VEGFA-230ENST00000640482 G3V3G9 751 aa32.05■■■□□ 2.72
VEGFA-230ENST00000640482 BEND3Q5T5X7 828 aa32.05■■■□□ 2.72
VEGFA-230ENST00000640482 DCAF8Q5TAQ9 597 aa32.05■■■□□ 2.72
VEGFA-230ENST00000640482 TMEM88BA6NKF7 163 aa32.04■■■□□ 2.72
VEGFA-230ENST00000640482 ATP2B4P23634 1241 aa32.04■■■□□ 2.72
VEGFA-230ENST00000640482 PSMD14O00487 310 aa32.03■■■□□ 2.72
VEGFA-230ENST00000640482 IGHMBP2P38935 993 aaKnown RBP32.03■■■□□ 2.72
VEGFA-230ENST00000640482 CNOT7Q9UIV1 285 aaKnown RBP32.02■■■□□ 2.72
VEGFA-230ENST00000640482 H7C1D1 291 aa32.01■■■□□ 2.71
VEGFA-230ENST00000640482 CSF1RP07333 972 aa32.01■■■□□ 2.71
VEGFA-230ENST00000640482 ITGA6P23229 1130 aa32.01■■■□□ 2.71
VEGFA-230ENST00000640482 DPF2Q92785 391 aa32.01■■■□□ 2.71
VEGFA-230ENST00000640482 MINPP1Q9UNW1 487 aa32.01■■■□□ 2.71
VEGFA-230ENST00000640482 RPS12P25398 132 aaKnown RBP32■■■□□ 2.71
VEGFA-230ENST00000640482 FAM161AQ3B820 660 aa32■■■□□ 2.71
VEGFA-230ENST00000640482 ZBTB12Q9Y330 459 aaPredicted RBP32■■■□□ 2.71
VEGFA-230ENST00000640482 SLFN5Q08AF3 891 aa31.99■■■□□ 2.71
VEGFA-230ENST00000640482 MICALL2Q8IY33 904 aa31.99■■■□□ 2.71
VEGFA-230ENST00000640482 MKRN1Q9UHC7 482 aaKnown RBP31.99■■■□□ 2.71
VEGFA-230ENST00000640482 SLC4A10Q6U841 1118 aa31.98■■■□□ 2.71
VEGFA-230ENST00000640482 MPHOSPH8Q99549 860 aa31.98■■■□□ 2.71
VEGFA-230ENST00000640482 ALDH1L1O75891 902 aa31.97■■■□□ 2.71
VEGFA-230ENST00000640482 KCNQ5Q9NR82 932 aa31.97■■■□□ 2.71
VEGFA-230ENST00000640482 CNTNAP1P78357 1384 aa31.96■■■□□ 2.71
VEGFA-230ENST00000640482 GRM8O00222 908 aa31.96■■■□□ 2.71
VEGFA-230ENST00000640482 ZC3H15Q8WU90 426 aaKnown RBP31.96■■■□□ 2.71
VEGFA-230ENST00000640482 SRCIN1Q9C0H9 1055 aa31.96■■■□□ 2.71
VEGFA-230ENST00000640482 SPEF2Q9C093 1822 aa31.96■■■□□ 2.71
VEGFA-230ENST00000640482 ANKRD18BA2A2Z9 1011 aa31.95■■■□□ 2.71
VEGFA-230ENST00000640482 CCT4P50991 539 aaKnown RBP31.95■■■□□ 2.71
VEGFA-230ENST00000640482 MRPL50Q8N5N7 158 aaKnown RBP31.95■■■□□ 2.71
VEGFA-230ENST00000640482 TRPM4Q8TD43 1214 aa31.95■■■□□ 2.71
VEGFA-230ENST00000640482 C9orf78Q9NZ63 289 aaPredicted RBP31.95■■■□□ 2.71
VEGFA-230ENST00000640482 MED23Q9ULK4 1368 aa31.94■■■□□ 2.7
VEGFA-230ENST00000640482 VIL1P09327 827 aaKnown RBP31.94■■■□□ 2.7
VEGFA-230ENST00000640482 FOXO4P98177 505 aa31.94■■■□□ 2.7
VEGFA-230ENST00000640482 PGAP2Q9UHJ9 254 aa31.94■■■□□ 2.7
VEGFA-230ENST00000640482 SHTN1A0MZ66 631 aa31.93■■■□□ 2.7
VEGFA-230ENST00000640482 HIRAP54198 1017 aaPredicted RBP31.93■■■□□ 2.7
VEGFA-230ENST00000640482 ANKRD2Q9GZV1 360 aa31.93■■■□□ 2.7
VEGFA-230ENST00000640482 LEMD3Q9Y2U8 911 aa31.93■■■□□ 2.7
VEGFA-230ENST00000640482 CHMP3Q9Y3E7 222 aa31.93■■■□□ 2.7
VEGFA-230ENST00000640482 IFIT5Q13325 482 aaKnown RBP31.92■■■□□ 2.7
VEGFA-230ENST00000640482 PODNQ7Z5L7 613 aa31.92■■■□□ 2.7
VEGFA-230ENST00000640482 PTPRCP08575 1304 aa31.92■■■□□ 2.7
VEGFA-230ENST00000640482 CDCA7LQ96GN5 454 aa31.9■■■□□ 2.7
VEGFA-230ENST00000640482 ABT1Q9ULW3 272 aaKnown RBP31.9■■■□□ 2.7
VEGFA-230ENST00000640482 TRAF5O00463 557 aa31.89■■■□□ 2.7
VEGFA-230ENST00000640482 LMBR1LQ6UX01 489 aa31.89■■■□□ 2.7
VEGFA-230ENST00000640482 SAMD7Q7Z3H4 446 aa31.89■■■□□ 2.7
VEGFA-230ENST00000640482 SSH1Q8WYL5 1049 aa31.89■■■□□ 2.7
VEGFA-230ENST00000640482 SCN9AQ15858 1988 aa31.88■■■□□ 2.69
VEGFA-230ENST00000640482 WTIPA6NIX2 430 aaPredicted RBP31.88■■■□□ 2.69
VEGFA-230ENST00000640482 RASSF10A6NK89 507 aa31.88■■■□□ 2.69
VEGFA-230ENST00000640482 FMR1Q06787 632 aaKnown RBP eCLIP31.88■■■□□ 2.69
VEGFA-230ENST00000640482 RSBN1LQ6PCB5 846 aaPredicted RBP31.88■■■□□ 2.69
VEGFA-230ENST00000640482 AGBL3Q8NEM8 1001 aa31.88■■■□□ 2.69
VEGFA-230ENST00000640482 ZNF609O15014 1411 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 ZNF804BA4D1E1 1349 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 USP17L3A6NCW0 530 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 USP17L4A6NCW7 530 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 CHRNDQ07001 517 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 CCDC57Q2TAC2 916 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 DEFB115Q30KQ5 88 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 ALDH1L2Q3SY69 923 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 TBC1D10BQ4KMP7 808 aaPredicted RBP31.87■■■□□ 2.69
VEGFA-230ENST00000640482 USP17L1Q7RTZ2 530 aa31.87■■■□□ 2.69
VEGFA-230ENST00000640482 GLIS2Q9BZE0 524 aaPredicted RBP31.87■■■□□ 2.69
VEGFA-230ENST00000640482 HSPA1AP0DMV8 641 aaKnown RBP31.86■■■□□ 2.69
VEGFA-230ENST00000640482 HSPA1BP0DMV9 641 aaKnown RBP31.86■■■□□ 2.69
VEGFA-230ENST00000640482 KCNJ4P48050 445 aa31.86■■■□□ 2.69
VEGFA-230ENST00000640482 CDC37L1Q7L3B6 337 aa31.86■■■□□ 2.69
VEGFA-230ENST00000640482 TRMT2AQ8IZ69 625 aaKnown RBP31.86■■■□□ 2.69
VEGFA-230ENST00000640482 COA1Q9GZY4 146 aa31.86■■■□□ 2.69
VEGFA-230ENST00000640482 VEGFBP49765 207 aa31.85■■■□□ 2.69
VEGFA-230ENST00000640482 TAF7LQ5H9L4 462 aa31.85■■■□□ 2.69
VEGFA-230ENST00000640482 EPHA10Q5JZY3 1008 aa31.85■■■□□ 2.69
VEGFA-230ENST00000640482 RBM26Q5T8P6 1007 aaKnown RBP31.84■■■□□ 2.69
VEGFA-230ENST00000640482 CST9Q5W186 159 aa31.84■■■□□ 2.69
VEGFA-230ENST00000640482 CT47B1P0C2W7 299 aaPredicted RBP31.83■■■□□ 2.69
VEGFA-230ENST00000640482 KIF4BQ2VIQ3 1234 aa31.83■■■□□ 2.69
VEGFA-230ENST00000640482 TRPM7Q96QT4 1865 aa31.82■■■□□ 2.69
VEGFA-230ENST00000640482 PSME4Q14997 1843 aa31.82■■■□□ 2.68
VEGFA-230ENST00000640482 UTYO14607 1347 aa31.82■■■□□ 2.68
VEGFA-230ENST00000640482 EGFRP00533 1210 aa31.82■■■□□ 2.68
VEGFA-230ENST00000640482 SMC4Q9NTJ3 1288 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms