RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
RFC1-217ENST00000639695 IGSF3O75054 1194 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 MAP3K6O95382 1288 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 NOS3P29474 1203 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 IREB2P48200 963 aaKnown RBP10.21□□□□□ -0.77
RFC1-217ENST00000639695 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 WFDC12Q8WWY7 111 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 PRIMPOLQ96LW4 560 aa10.21□□□□□ -0.77
RFC1-217ENST00000639695 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
RFC1-217ENST00000639695 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
RFC1-217ENST00000639695 MRRFQ96E11 262 aaKnown RBP10.2□□□□□ -0.78
RFC1-217ENST00000639695 QTRT2Q9H974 415 aaKnown RBP10.2□□□□□ -0.78
RFC1-217ENST00000639695 DEAF1O75398 565 aaPredicted RBP10.19□□□□□ -0.78
RFC1-217ENST00000639695 SASH3O75995 380 aa10.19□□□□□ -0.78
RFC1-217ENST00000639695 IGFBP4P22692 258 aa10.19□□□□□ -0.78
RFC1-217ENST00000639695 DGKZQ13574 1117 aa10.19□□□□□ -0.78
RFC1-217ENST00000639695 TRPM4Q8TD43 1214 aa10.19□□□□□ -0.78
RFC1-217ENST00000639695 MEGF10Q96KG7 1140 aa10.19□□□□□ -0.78
RFC1-217ENST00000639695 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
RFC1-217ENST00000639695 ANKRD33BA6NCL7 494 aa10.18□□□□□ -0.78
RFC1-217ENST00000639695 ZNF16P17020 682 aaPredicted RBP10.18□□□□□ -0.78
RFC1-217ENST00000639695 OCLNQ16625 522 aa10.18□□□□□ -0.78
RFC1-217ENST00000639695 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
RFC1-217ENST00000639695 GLYCTKQ8IVS8 523 aa10.18□□□□□ -0.78
RFC1-217ENST00000639695 BCL11AQ9H165 835 aa10.18□□□□□ -0.78
RFC1-217ENST00000639695 FRRS1LQ9P0K9 344 aa10.18□□□□□ -0.78
RFC1-217ENST00000639695 ICMTO60725 284 aa10.17□□□□□ -0.78
RFC1-217ENST00000639695 SCNN1AP37088 669 aa10.17□□□□□ -0.78
RFC1-217ENST00000639695 H3BRB1 525 aa10.16□□□□□ -0.78
RFC1-217ENST00000639695 ELMSAN1Q6PJG2 1045 aa10.16□□□□□ -0.78
RFC1-217ENST00000639695 WFDC8Q8IUA0 241 aa10.16□□□□□ -0.78
RFC1-217ENST00000639695 DTWD1Q8N5C7 304 aa10.16□□□□□ -0.78
RFC1-217ENST00000639695 GIPC2Q8TF65 315 aa10.16□□□□□ -0.78
RFC1-217ENST00000639695 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
RFC1-217ENST00000639695 MICAL2O94851 1124 aa10.15□□□□□ -0.78
RFC1-217ENST00000639695 RARAP10276 462 aa10.15□□□□□ -0.78
RFC1-217ENST00000639695 ARSDP51689 593 aa10.15□□□□□ -0.78
RFC1-217ENST00000639695 GPLD1P80108 840 aa10.15□□□□□ -0.78
RFC1-217ENST00000639695 SMG9Q9H0W8 520 aaKnown RBP10.15□□□□□ -0.78
RFC1-217ENST00000639695 OPLAHO14841 1288 aa10.14□□□□□ -0.79
RFC1-217ENST00000639695 EPB42P16452 691 aa10.14□□□□□ -0.79
RFC1-217ENST00000639695 FKBP4Q02790 459 aaKnown RBP eCLIP10.14□□□□□ -0.79
RFC1-217ENST00000639695 ZNF211Q13398 564 aaPredicted RBP10.14□□□□□ -0.79
RFC1-217ENST00000639695 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
RFC1-217ENST00000639695 LCE3BQ5TA77 95 aa10.14□□□□□ -0.79
RFC1-217ENST00000639695 ZSCAN29Q8IWY8 852 aaPredicted RBP10.14□□□□□ -0.79
RFC1-217ENST00000639695 GTF3C2Q8WUA4 911 aaPredicted RBP10.14□□□□□ -0.79
RFC1-217ENST00000639695 KIAA1522Q9P206 1035 aaPredicted RBP10.14□□□□□ -0.79
RFC1-217ENST00000639695 LOC105371045A0A1W2PR82 267 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 PTCD1O75127 700 aaKnown RBP10.13□□□□□ -0.79
RFC1-217ENST00000639695 WEE1P30291 646 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 PCSK7Q16549 785 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 NOM1Q5C9Z4 860 aaKnown RBP10.13□□□□□ -0.79
RFC1-217ENST00000639695 TTC9Q92623 222 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 ANO2Q9NQ90 1003 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 USP35Q9P2H5 1018 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 LRFN2Q9ULH4 789 aa10.13□□□□□ -0.79
RFC1-217ENST00000639695 DLL1O00548 723 aa10.12□□□□□ -0.79
RFC1-217ENST00000639695 ALX3O95076 343 aa10.12□□□□□ -0.79
RFC1-217ENST00000639695 MAPK1P28482 360 aa10.12□□□□□ -0.79
RFC1-217ENST00000639695 IGF2-ASQ6U949 168 aa10.12□□□□□ -0.79
RFC1-217ENST00000639695 NPAS4Q8IUM7 802 aa10.12□□□□□ -0.79
RFC1-217ENST00000639695 IGSF5Q9NSI5 407 aa10.12□□□□□ -0.79
RFC1-217ENST00000639695 DCTN4Q9UJW0 460 aa10.11□□□□□ -0.79
RFC1-217ENST00000639695 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
RFC1-217ENST00000639695 J3QW42 95 aa10.1□□□□□ -0.79
RFC1-217ENST00000639695 EIF2AK2P19525 551 aaKnown RBP10.1□□□□□ -0.79
RFC1-217ENST00000639695 PRR23CQ6ZRP0 262 aa10.1□□□□□ -0.79
RFC1-217ENST00000639695 RNF112Q9ULX5 631 aa10.1□□□□□ -0.79
RFC1-217ENST00000639695 NRLP54845 237 aa10.09□□□□□ -0.79
RFC1-217ENST00000639695 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
RFC1-217ENST00000639695 MYO19Q96H55 970 aa10.09□□□□□ -0.79
RFC1-217ENST00000639695 ASB16Q96NS5 453 aa10.09□□□□□ -0.79
RFC1-217ENST00000639695 MKNK1Q9BUB5 465 aa10.09□□□□□ -0.79
RFC1-217ENST00000639695 TLR7Q9NYK1 1049 aaKnown RBP10.09□□□□□ -0.79
RFC1-217ENST00000639695 SEPT3Q9UH03 358 aa10.09□□□□□ -0.79
RFC1-217ENST00000639695 KRTAP19-1Q8IUB9 90 aa10.08□□□□□ -0.8
RFC1-217ENST00000639695 COL26A1Q96A83 441 aa10.08□□□□□ -0.8
RFC1-217ENST00000639695 FOXO3O43524 673 aa10.07□□□□□ -0.8
RFC1-217ENST00000639695 COL19A1Q14993 1142 aa10.07□□□□□ -0.8
RFC1-217ENST00000639695 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
RFC1-217ENST00000639695 RGL4Q8IZJ4 473 aa10.07□□□□□ -0.8
RFC1-217ENST00000639695 PLD4Q96BZ4 506 aa10.07□□□□□ -0.8
RFC1-217ENST00000639695 KCNMB2Q9Y691 235 aa10.07□□□□□ -0.8
RFC1-217ENST00000639695 MMP20O60882 483 aa10.06□□□□□ -0.8
RFC1-217ENST00000639695 XYLBO75191 536 aa10.06□□□□□ -0.8
RFC1-217ENST00000639695 EGFRP00533 1210 aa10.06□□□□□ -0.8
RFC1-217ENST00000639695 TCF3P15923 654 aa10.06□□□□□ -0.8
RFC1-217ENST00000639695 GDF6Q6KF10 455 aaPredicted RBP10.06□□□□□ -0.8
RFC1-217ENST00000639695 NSUN5Q96P11 429 aaKnown RBP10.06□□□□□ -0.8
RFC1-217ENST00000639695 AKTIPQ9H8T0 292 aa10.06□□□□□ -0.8
RFC1-217ENST00000639695 C11orf16Q9NQ32 467 aa10.06□□□□□ -0.8
RFC1-217ENST00000639695 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.8
RFC1-217ENST00000639695 FAM13AO94988 1023 aa10.05□□□□□ -0.8
RFC1-217ENST00000639695 VAMP1P23763 118 aa10.05□□□□□ -0.8
RFC1-217ENST00000639695 FKBP5Q13451 457 aaPredicted RBP10.05□□□□□ -0.8
RFC1-217ENST00000639695 TREML1Q86YW5 311 aa10.05□□□□□ -0.8
RFC1-217ENST00000639695 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
RFC1-217ENST00000639695 VTI1AQ96AJ9 217 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms