RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	TBC1D16	Q8TBP0	767 aa		18.87	■□□□□ 0.61
TARDBP-231	ENST00000639599	DCPS	Q96C86	337 aa	Known RBP	18.87	■□□□□ 0.61
TARDBP-231	ENST00000639599	METTL22	Q9BUU2	404 aa	Predicted RBP	18.87	■□□□□ 0.61
TARDBP-231	ENST00000639599	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.86	■□□□□ 0.61
TARDBP-231	ENST00000639599	CDC5L	Q99459	802 aa	Known RBP	18.86	■□□□□ 0.61
TARDBP-231	ENST00000639599	SEC31B	Q9NQW1	1179 aa		18.86	■□□□□ 0.61
TARDBP-231	ENST00000639599	MAP3K2	Q9Y2U5	619 aa		18.86	■□□□□ 0.61
TARDBP-231	ENST00000639599	MAP2K2	P36507	400 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	SAMD7	Q7Z3H4	446 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	KRT26	Q7Z3Y9	468 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	SAPCD2	Q86UD0	394 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	USP48	Q86UV5	1035 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	PGAP2	Q9UHJ9	254 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	LAMB2	P55268	1798 aa		18.85	■□□□□ 0.61
TARDBP-231	ENST00000639599	HIRA	P54198	1017 aa	Predicted RBP	18.84	■□□□□ 0.61
TARDBP-231	ENST00000639599	KIF4B	Q2VIQ3	1234 aa		18.84	■□□□□ 0.61
TARDBP-231	ENST00000639599	JARID2	Q92833	1246 aa	Predicted RBP	18.84	■□□□□ 0.61
TARDBP-231	ENST00000639599	PODXL2	Q9NZ53	605 aa		18.84	■□□□□ 0.61
TARDBP-231	ENST00000639599	SHTN1	A0MZ66	631 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	CA12	O43570	354 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	AOC2	O75106	756 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	KSR2	Q6VAB6	950 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	SULF1	Q8IWU6	871 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	TSR2	Q969E8	191 aa	Known RBP	18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	HHIPL1	Q96JK4	782 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	DUOX1	Q9NRD9	1551 aa		18.83	■□□□□ 0.6
TARDBP-231	ENST00000639599	XDH	P47989	1333 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	PI4KAP2	A4QPH2	592 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	ATP2B4	P23634	1241 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	CTSW	P56202	376 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	HUNK	P57058	714 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	PI4KAP1	Q8N8J0	262 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	C2orf69	Q8N8R5	385 aa		18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	DDX60	Q8IY21	1712 aa	Known RBP	18.82	■□□□□ 0.6
TARDBP-231	ENST00000639599	LRRC37A	A6NMS7	1700 aa		18.81	■□□□□ 0.6
TARDBP-231	ENST00000639599	TWISTNB	Q3B726	338 aa	Predicted RBP	18.81	■□□□□ 0.6
TARDBP-231	ENST00000639599	NOG	Q13253	232 aa		18.8	■□□□□ 0.6
TARDBP-231	ENST00000639599	TSPYL6	Q8N831	410 aa		18.8	■□□□□ 0.6
TARDBP-231	ENST00000639599	FBXW7	Q969H0	707 aa		18.8	■□□□□ 0.6
TARDBP-231	ENST00000639599	GBA2	Q9HCG7	927 aa	Predicted RBP	18.8	■□□□□ 0.6
TARDBP-231	ENST00000639599	RTL9	Q8NET4	1388 aa		18.8	■□□□□ 0.6
TARDBP-231	ENST00000639599	VIL1	P09327	827 aa	Known RBP	18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	IGHMBP2	P38935	993 aa	Known RBP	18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	BRPF1	P55201	1214 aa	Predicted RBP	18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	CCDC27	Q2M243	656 aa		18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	MRS2	Q9HD23	443 aa		18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	KCNQ5	Q9NR82	932 aa		18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	GGA3	Q9NZ52	723 aa		18.79	■□□□□ 0.6
TARDBP-231	ENST00000639599	ADM5	C9JUS6	153 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	ANP32C	O43423	234 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	SLC4A2	P04920	1241 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	WWC1	Q8IX03	1113 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	AGBL3	Q8NEM8	1001 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	MYH16	Q9H6N6	1097 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	TSKS	Q9UJT2	592 aa		18.78	■□□□□ 0.6
TARDBP-231	ENST00000639599	FKBP5	Q13451	457 aa	Predicted RBP	18.77	■□□□□ 0.6
TARDBP-231	ENST00000639599	UBE3B	Q7Z3V4	1068 aa		18.77	■□□□□ 0.6
TARDBP-231	ENST00000639599	PODN	Q7Z5L7	613 aa		18.77	■□□□□ 0.6
TARDBP-231	ENST00000639599	PCNT	O95613	3336 aa		18.77	■□□□□ 0.59
TARDBP-231	ENST00000639599	USP17L3	A6NCW0	530 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	USP17L4	A6NCW7	530 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	IGKV5-2	P06315	115 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	CWF19L2	Q2TBE0	894 aa	Known RBP	18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	RGMB	Q6NW40	437 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	USP17L1	Q7RTZ2	530 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	CCDC102A	Q96A19	550 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	ABHD8	Q96I13	439 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	MPHOSPH8	Q99549	860 aa		18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	BSDC1	Q9NW68	430 aa	Predicted RBP	18.76	■□□□□ 0.59
TARDBP-231	ENST00000639599	IL16	Q14005	1332 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	TRPM7	Q96QT4	1865 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	NEURL1B	A8MQ27	555 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	EGFR	P00533	1210 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	USP17L8	P0C7I0	530 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	KCNJ4	P48050	445 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	ZNF157	P51786	506 aa	Predicted RBP	18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	OGFOD1	Q8N543	542 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	TTLL11	Q8NHH1	800 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	GREM2	Q9H772	168 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	SALL2	Q9Y467	1007 aa	Predicted RBP	18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	TAF1	P21675	1872 aa		18.75	■□□□□ 0.59
TARDBP-231	ENST00000639599	THSD7B	Q9C0I4	1608 aa		18.74	■□□□□ 0.59
TARDBP-231	ENST00000639599	ZEB1	P37275	1124 aa	Predicted RBP	18.74	■□□□□ 0.59
TARDBP-231	ENST00000639599	FLII	Q13045	1269 aa		18.74	■□□□□ 0.59
TARDBP-231	ENST00000639599	ANGEL2	Q5VTE6	544 aa	Known RBP	18.74	■□□□□ 0.59
TARDBP-231	ENST00000639599	MED23	Q9ULK4	1368 aa		18.73	■□□□□ 0.59
TARDBP-231	ENST00000639599	CCDC85C	A6NKD9	419 aa		18.73	■□□□□ 0.59
TARDBP-231	ENST00000639599	CCT4	P50991	539 aa	Known RBP	18.73	■□□□□ 0.59
TARDBP-231	ENST00000639599	SCARF1	Q14162	830 aa		18.73	■□□□□ 0.59
TARDBP-231	ENST00000639599	MYOZ2	Q9NPC6	264 aa		18.73	■□□□□ 0.59
TARDBP-231	ENST00000639599	MINPP1	Q9UNW1	487 aa		18.73	■□□□□ 0.59
TARDBP-231	ENST00000639599	CCDC184	Q52MB2	194 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	DLK2	Q6UY11	383 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	DNAAF4	Q8WXU2	420 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	CDCA5	Q96FF9	252 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	ANKRD2	Q9GZV1	360 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	COL4A1	P02462	1669 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	MYO3B	Q8WXR4	1341 aa		18.72	■□□□□ 0.59
TARDBP-231	ENST00000639599	FANCI	Q9NVI1	1328 aa		18.72	■□□□□ 0.59

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