RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 INHBEP58166 350 aa14.64□□□□□ -0.07
PTP4A1-207ENST00000639568 TAF7Q15545 349 aaPredicted RBP14.64□□□□□ -0.07
PTP4A1-207ENST00000639568 PRAMEF18Q5VWM3 479 aa14.64□□□□□ -0.07
PTP4A1-207ENST00000639568 NBPF11Q86T75 865 aa14.64□□□□□ -0.07
PTP4A1-207ENST00000639568 PAPPA2Q9BXP8 1791 aa14.64□□□□□ -0.07
PTP4A1-207ENST00000639568 ZNF280AP59817 542 aaPredicted RBP14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 ARMC9Q7Z3E5 817 aa14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 NECTIN2Q92692 538 aa14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 ZC3H12CQ9C0D7 883 aaKnown RBP14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 MYOZ2Q9NPC6 264 aa14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 MIS18AQ9NYP9 233 aa14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 RBM27Q9P2N5 1060 aaKnown RBP14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 SCAF8Q9UPN6 1271 aaKnown RBP14.63□□□□□ -0.07
PTP4A1-207ENST00000639568 BRCA2P51587 3418 aa14.62□□□□□ -0.07
PTP4A1-207ENST00000639568 USP17L8P0C7I0 530 aa14.62□□□□□ -0.07
PTP4A1-207ENST00000639568 DCTN1Q14203 1278 aa14.62□□□□□ -0.07
PTP4A1-207ENST00000639568 AGBL3Q8NEM8 1001 aa14.62□□□□□ -0.07
PTP4A1-207ENST00000639568 POLLQ9UGP5 575 aa14.62□□□□□ -0.07
PTP4A1-207ENST00000639568 COL6A3P12111 3177 aa14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 RANBP2P49792 3224 aaKnown RBP14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 MANSC4A6NHS7 340 aaPredicted RBP14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 EIF4G2P78344 907 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 SPRYD7Q5W111 196 aa14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 RSBN1LQ6PCB5 846 aaPredicted RBP14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 IFNL1Q8IU54 200 aa14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 DPF3Q92784 378 aa14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 TRMT112Q9UI30 125 aaKnown RBP14.61□□□□□ -0.07
PTP4A1-207ENST00000639568 CEP290O15078 2479 aa14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 HTATSF1O43719 755 aaKnown RBP14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 GPSM2P81274 684 aa14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 PTPN12Q05209 780 aaKnown RBP14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 PRKG1Q13976 671 aa14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 SLC9C1Q4G0N8 1177 aa14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 PNISRQ8TF01 805 aaKnown RBP14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 ZNF333Q96JL9 665 aa14.6□□□□□ -0.07
PTP4A1-207ENST00000639568 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
PTP4A1-207ENST00000639568 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
PTP4A1-207ENST00000639568 OTUD7BQ6GQQ9 843 aa14.59□□□□□ -0.07
PTP4A1-207ENST00000639568 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
PTP4A1-207ENST00000639568 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
PTP4A1-207ENST00000639568 SH3TC1Q8TE82 1336 aa14.59□□□□□ -0.07
PTP4A1-207ENST00000639568 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.08
PTP4A1-207ENST00000639568 SP3Q02447 781 aa14.58□□□□□ -0.08
PTP4A1-207ENST00000639568 TBC1D16Q8TBP0 767 aa14.58□□□□□ -0.08
PTP4A1-207ENST00000639568 SLC10A4Q96EP9 437 aa14.58□□□□□ -0.08
PTP4A1-207ENST00000639568 KIAA0100Q14667 2235 aaKnown RBP14.58□□□□□ -0.08
PTP4A1-207ENST00000639568 POLR2AP24928 1970 aaKnown RBP14.58□□□□□ -0.08
PTP4A1-207ENST00000639568 DUOX1Q9NRD9 1551 aa14.57□□□□□ -0.08
PTP4A1-207ENST00000639568 MYCP01106 439 aaPredicted RBP14.57□□□□□ -0.08
PTP4A1-207ENST00000639568 NLRP10Q86W26 655 aa14.57□□□□□ -0.08
PTP4A1-207ENST00000639568 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 NBPF9Q3BBW0 867 aa14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 OGFOD1Q8N543 542 aa14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 ANKIB1Q9P2G1 1089 aa14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 ANGEL1Q9UNK9 670 aaKnown RBP14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 NUDCQ9Y266 331 aa14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 NUP98P52948 1817 aa14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 ERBB4Q15303 1308 aa14.56□□□□□ -0.08
PTP4A1-207ENST00000639568 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 CRHR2Q13324 411 aa14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 LDLRAD1Q5T700 205 aa14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 CFAP53Q96M91 514 aa14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 THUMPD2Q9BTF0 503 aaKnown RBP14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 ZNF609O15014 1411 aa14.55□□□□□ -0.08
PTP4A1-207ENST00000639568 USP17L3A6NCW0 530 aa14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 USP17L4A6NCW7 530 aa14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 IGF2BP3O00425 579 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 UFL1O94874 794 aa14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 U2AF1L5P0DN76 240 aaPredicted RBP14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 U2AF1Q01081 240 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 USP17L1Q7RTZ2 530 aa14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
PTP4A1-207ENST00000639568 COL3A1P02461 1466 aaPredicted RBP14.53□□□□□ -0.08
PTP4A1-207ENST00000639568 GMLQ99445 158 aa14.53□□□□□ -0.08
PTP4A1-207ENST00000639568 GGA1Q9UJY5 639 aa14.53□□□□□ -0.08
PTP4A1-207ENST00000639568 NR2E3Q9Y5X4 410 aa14.53□□□□□ -0.08
PTP4A1-207ENST00000639568 PTCH2Q9Y6C5 1203 aa14.53□□□□□ -0.08
PTP4A1-207ENST00000639568 RBBP6Q7Z6E9 1792 aaKnown RBP14.52□□□□□ -0.08
PTP4A1-207ENST00000639568 WTIPA6NIX2 430 aaPredicted RBP14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 EIF2S2P20042 333 aaKnown RBP14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 RPS8P62241 208 aaKnown RBP14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 AIMP1Q12904 312 aaKnown RBP14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 ZNF428Q96B54 188 aa14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 HTATIP2Q9BUP3 242 aa14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 PODXL2Q9NZ53 605 aa14.52□□□□□ -0.09
PTP4A1-207ENST00000639568 WNT10BO00744 389 aa14.51□□□□□ -0.09
PTP4A1-207ENST00000639568 SF3B3Q15393 1217 aaKnown RBP14.51□□□□□ -0.09
PTP4A1-207ENST00000639568 ANKRD13DQ6ZTN6 518 aa14.51□□□□□ -0.09
PTP4A1-207ENST00000639568 APOBEC3FQ8IUX4 373 aaKnown RBP14.51□□□□□ -0.09
PTP4A1-207ENST00000639568 WNK4Q96J92 1243 aa14.51□□□□□ -0.09
PTP4A1-207ENST00000639568 A0A1W2PPC1 479 aa14.5□□□□□ -0.09
PTP4A1-207ENST00000639568 PPP1R12BO60237 982 aaPredicted RBP14.5□□□□□ -0.09
PTP4A1-207ENST00000639568 NEFMP07197 916 aa14.5□□□□□ -0.09
PTP4A1-207ENST00000639568 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms