RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
PMS1-222ENST00000639501 E4F1Q66K89 784 aaPredicted RBP24.03■■□□□ 1.44
PMS1-222ENST00000639501 MAP3K2Q9Y2U5 619 aa24.03■■□□□ 1.44
PMS1-222ENST00000639501 CEMIPQ8WUJ3 1361 aa24.02■■□□□ 1.44
PMS1-222ENST00000639501 RGPD8O14715 1765 aaPredicted RBP24.02■■□□□ 1.44
PMS1-222ENST00000639501 TAF5LO75529 589 aa24.02■■□□□ 1.44
PMS1-222ENST00000639501 PROSER3Q2NL68 480 aa24.02■■□□□ 1.44
PMS1-222ENST00000639501 KAZALD1Q96I82 304 aa24.02■■□□□ 1.44
PMS1-222ENST00000639501 CCDC66A2RUB6 948 aa24.01■■□□□ 1.43
PMS1-222ENST00000639501 H2AFXP16104 143 aaPredicted RBP24.01■■□□□ 1.43
PMS1-222ENST00000639501 SCRN1Q12765 414 aa24.01■■□□□ 1.43
PMS1-222ENST00000639501 Q6ZUG5 572 aa24.01■■□□□ 1.43
PMS1-222ENST00000639501 SIL1Q9H173 461 aa24.01■■□□□ 1.43
PMS1-222ENST00000639501 CFAP45Q9UL16 551 aa24.01■■□□□ 1.43
PMS1-222ENST00000639501 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
PMS1-222ENST00000639501 HSP90B1P14625 803 aaKnown RBP24■■□□□ 1.43
PMS1-222ENST00000639501 SUCLG2Q96I99 432 aa24■■□□□ 1.43
PMS1-222ENST00000639501 USP28Q96RU2 1077 aa24■■□□□ 1.43
PMS1-222ENST00000639501 KCND1Q9NSA2 647 aa24■■□□□ 1.43
PMS1-222ENST00000639501 MED1Q15648 1581 aaPredicted RBP24■■□□□ 1.43
PMS1-222ENST00000639501 VGLL3A8MV65 326 aa24■■□□□ 1.43
PMS1-222ENST00000639501 PPFIA3O75145 1194 aa24■■□□□ 1.43
PMS1-222ENST00000639501 NLRP6P59044 892 aa24■■□□□ 1.43
PMS1-222ENST00000639501 TSGA10IPQ3SY00 556 aa24■■□□□ 1.43
PMS1-222ENST00000639501 C14orf37Q86TY3 774 aa24■■□□□ 1.43
PMS1-222ENST00000639501 NGDNQ8NEJ9 315 aaKnown RBP24■■□□□ 1.43
PMS1-222ENST00000639501 ENGASEQ8NFI3 743 aa24■■□□□ 1.43
PMS1-222ENST00000639501 KLHDC4Q8TBB5 520 aa24■■□□□ 1.43
PMS1-222ENST00000639501 ZSCAN16Q9H4T2 348 aaPredicted RBP24■■□□□ 1.43
PMS1-222ENST00000639501 FHOD1Q9Y613 1164 aa24■■□□□ 1.43
PMS1-222ENST00000639501 SYT10Q6XYQ8 523 aa23.99■■□□□ 1.43
PMS1-222ENST00000639501 PPP1R13BQ96KQ4 1090 aa23.99■■□□□ 1.43
PMS1-222ENST00000639501 L2HGDHQ9H9P8 463 aa23.99■■□□□ 1.43
PMS1-222ENST00000639501 HMG20BQ9P0W2 317 aa23.99■■□□□ 1.43
PMS1-222ENST00000639501 BICC1Q9H694 974 aaKnown RBP23.99■■□□□ 1.43
PMS1-222ENST00000639501 RCOR1Q9UKL0 485 aa23.99■■□□□ 1.43
PMS1-222ENST00000639501 NDUFB9Q9Y6M9 179 aa23.99■■□□□ 1.43
PMS1-222ENST00000639501 CTAGE5O15320 804 aa23.98■■□□□ 1.43
PMS1-222ENST00000639501 CLCN6P51797 869 aa23.98■■□□□ 1.43
PMS1-222ENST00000639501 CCDC129Q6ZRS4 1044 aa23.98■■□□□ 1.43
PMS1-222ENST00000639501 NEK1Q96PY6 1258 aa23.98■■□□□ 1.43
PMS1-222ENST00000639501 MARF1Q9Y4F3 1742 aaKnown RBP23.98■■□□□ 1.43
PMS1-222ENST00000639501 ARMCX5Q6P1M9 558 aa23.98■■□□□ 1.43
PMS1-222ENST00000639501 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
PMS1-222ENST00000639501 ANO10Q9NW15 660 aa23.98■■□□□ 1.43
PMS1-222ENST00000639501 USPL1Q5W0Q7 1092 aa23.97■■□□□ 1.43
PMS1-222ENST00000639501 TIGD1Q96MW7 591 aa23.97■■□□□ 1.43
PMS1-222ENST00000639501 KINO60870 393 aaKnown RBP23.97■■□□□ 1.43
PMS1-222ENST00000639501 CCDC93Q567U6 631 aa23.97■■□□□ 1.43
PMS1-222ENST00000639501 CCDC73Q6ZRK6 1079 aa23.97■■□□□ 1.43
PMS1-222ENST00000639501 OSBPL5Q9H0X9 879 aaPredicted RBP23.97■■□□□ 1.43
PMS1-222ENST00000639501 CEP57L1Q8IYX8 460 aa23.96■■□□□ 1.43
PMS1-222ENST00000639501 SMARCC2Q8TAQ2 1214 aa23.96■■□□□ 1.43
PMS1-222ENST00000639501 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
PMS1-222ENST00000639501 CTDNEP1O95476 244 aa23.95■■□□□ 1.43
PMS1-222ENST00000639501 FSIP1Q8NA03 581 aa23.95■■□□□ 1.43
PMS1-222ENST00000639501 SEC62Q99442 399 aaKnown RBP23.95■■□□□ 1.43
PMS1-222ENST00000639501 NOL10Q9BSC4 688 aaKnown RBP23.95■■□□□ 1.43
PMS1-222ENST00000639501 HOXB7P09629 217 aa23.95■■□□□ 1.42
PMS1-222ENST00000639501 FAM160A1Q05DH4 1040 aa23.95■■□□□ 1.42
PMS1-222ENST00000639501 G3BP1Q13283 466 aaKnown RBP eCLIP23.95■■□□□ 1.42
PMS1-222ENST00000639501 NSUN7Q8NE18 718 aaKnown RBP23.95■■□□□ 1.42
PMS1-222ENST00000639501 PRAMEF22A3QJZ6 481 aa23.94■■□□□ 1.42
PMS1-222ENST00000639501 ALDH1L1O75891 902 aa23.94■■□□□ 1.42
PMS1-222ENST00000639501 CYP21A2P08686 494 aa23.94■■□□□ 1.42
PMS1-222ENST00000639501 GSDMDP57764 484 aa23.94■■□□□ 1.42
PMS1-222ENST00000639501 GUCY1B3Q02153 619 aa23.94■■□□□ 1.42
PMS1-222ENST00000639501 ILDR1Q86SU0 546 aaPredicted RBP23.94■■□□□ 1.42
PMS1-222ENST00000639501 XPO4Q9C0E2 1151 aaKnown RBP23.94■■□□□ 1.42
PMS1-222ENST00000639501 PNMA6AP0CW24 399 aaPredicted RBP23.93■■□□□ 1.42
PMS1-222ENST00000639501 CYP2C19P33261 490 aa23.93■■□□□ 1.42
PMS1-222ENST00000639501 PLA2G4AP47712 749 aa23.93■■□□□ 1.42
PMS1-222ENST00000639501 DPCR1Q3MIW9 517 aa23.93■■□□□ 1.42
PMS1-222ENST00000639501 STOX1Q6ZVD7 989 aa23.93■■□□□ 1.42
PMS1-222ENST00000639501 BMS1Q14692 1282 aaKnown RBP23.93■■□□□ 1.42
PMS1-222ENST00000639501 TMC6Q7Z403 805 aa23.93■■□□□ 1.42
PMS1-222ENST00000639501 KIF2AO00139 706 aaPredicted RBP23.92■■□□□ 1.42
PMS1-222ENST00000639501 CAPN2P17655 700 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 ARHGAP29Q52LW3 1261 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 ZNF609O15014 1411 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 PTPDC1A2A3K4 754 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 ME1P48163 572 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 GORABQ5T7V8 394 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 IFNKQ9P0W0 207 aa23.92■■□□□ 1.42
PMS1-222ENST00000639501 DBF4Q9UBU7 674 aaPredicted RBP23.92■■□□□ 1.42
PMS1-222ENST00000639501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.92■■□□□ 1.426e-6■■□□□ 13.3
PMS1-222ENST00000639501 LAMA4Q16363 1823 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 GRM8O00222 908 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 SMC2O95347 1197 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 KRT32Q14532 448 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 KSR2Q6VAB6 950 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 NAA16Q6N069 864 aaPredicted RBP23.91■■□□□ 1.42
PMS1-222ENST00000639501 TRERF1Q96PN7 1200 aa23.91■■□□□ 1.42
PMS1-222ENST00000639501 FANCGO15287 622 aa23.9■■□□□ 1.42
PMS1-222ENST00000639501 FMR1NBQ8N0W7 255 aaPredicted RBP23.9■■□□□ 1.42
PMS1-222ENST00000639501 NCOA5Q9HCD5 579 aaKnown RBP23.9■■□□□ 1.42
PMS1-222ENST00000639501 ABCC6O95255 1503 aa23.9■■□□□ 1.42
PMS1-222ENST00000639501 NEDD4P46934 1319 aa23.9■■□□□ 1.42
PMS1-222ENST00000639501 ANKARQ7Z5J8 1434 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms