RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, human

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-222	ENST00000639447	GGA1	Q9UJY5	639 aa		18.9	■□□□□ 0.62
GRN-222	ENST00000639447	FANCI	Q9NVI1	1328 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447		G3V3G9	751 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447	CAPN15	O75808	1086 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447	RPS12	P25398	132 aa	Known RBP	18.89	■□□□□ 0.61
GRN-222	ENST00000639447	CTCF	P49711	727 aa	Predicted RBP	18.89	■□□□□ 0.61
GRN-222	ENST00000639447	CTSW	P56202	376 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447	DOK7	Q18PE1	504 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447	NCBP3	Q53F19	620 aa	Known RBP	18.89	■□□□□ 0.61
GRN-222	ENST00000639447	DCAF8	Q5TAQ9	597 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447	ANKRD18A	Q8IVF6	992 aa		18.89	■□□□□ 0.61
GRN-222	ENST00000639447	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.89	■□□□□ 0.61
GRN-222	ENST00000639447	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.89	■□□□□ 0.61
GRN-222	ENST00000639447	RTL9	Q8NET4	1388 aa		18.88	■□□□□ 0.61
GRN-222	ENST00000639447	SHTN1	A0MZ66	631 aa		18.88	■□□□□ 0.61
GRN-222	ENST00000639447	CELF2	O95319	508 aa	Known RBP	18.88	■□□□□ 0.61
GRN-222	ENST00000639447	GRM1	Q13255	1194 aa		18.88	■□□□□ 0.61
GRN-222	ENST00000639447	DPF2	Q92785	391 aa		18.88	■□□□□ 0.61
GRN-222	ENST00000639447	CAPNS2	Q96L46	248 aa		18.88	■□□□□ 0.61
GRN-222	ENST00000639447	CDC5L	Q99459	802 aa	Known RBP	18.88	■□□□□ 0.61
GRN-222	ENST00000639447	TLL2	Q9Y6L7	1015 aa		18.88	■□□□□ 0.61
GRN-222	ENST00000639447	TRPM7	Q96QT4	1865 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	XDH	P47989	1333 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	IGKV5-2	P06315	115 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	CST9	Q5W186	159 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	ZNF408	Q9H9D4	720 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	WBP1L	Q9NX94	342 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	PGAP2	Q9UHJ9	254 aa		18.87	■□□□□ 0.61
GRN-222	ENST00000639447	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.86	■□□□□ 0.61
GRN-222	ENST00000639447	HIRA	P54198	1017 aa	Predicted RBP	18.86	■□□□□ 0.61
GRN-222	ENST00000639447	MAP2K1	Q02750	393 aa	Predicted RBP	18.86	■□□□□ 0.61
GRN-222	ENST00000639447	CWF19L2	Q2TBE0	894 aa	Known RBP	18.86	■□□□□ 0.61
GRN-222	ENST00000639447	CDC37L1	Q7L3B6	337 aa		18.86	■□□□□ 0.61
GRN-222	ENST00000639447	PRDM10	Q9NQV6	1147 aa		18.86	■□□□□ 0.61
GRN-222	ENST00000639447	NEURL1B	A8MQ27	555 aa		18.85	■□□□□ 0.61
GRN-222	ENST00000639447	SLC4A2	P04920	1241 aa		18.85	■□□□□ 0.61
GRN-222	ENST00000639447	CYP4F22	Q6NT55	531 aa		18.85	■□□□□ 0.61
GRN-222	ENST00000639447	G2E3	Q7L622	706 aa		18.85	■□□□□ 0.61
GRN-222	ENST00000639447	FLII	Q13045	1269 aa		18.84	■□□□□ 0.61
GRN-222	ENST00000639447	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.84	■□□□□ 0.61
GRN-222	ENST00000639447	SAMD7	Q7Z3H4	446 aa		18.84	■□□□□ 0.61
GRN-222	ENST00000639447	PCNT	O95613	3336 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	ATP2B4	P23634	1241 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	FKBP5	Q13451	457 aa	Predicted RBP	18.83	■□□□□ 0.61
GRN-222	ENST00000639447	KIF4B	Q2VIQ3	1234 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	UBE3B	Q7Z3V4	1068 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	BEGAIN	Q9BUH8	593 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	MYH16	Q9H6N6	1097 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	GREM2	Q9H772	168 aa		18.83	■□□□□ 0.61
GRN-222	ENST00000639447	SALL2	Q9Y467	1007 aa	Predicted RBP	18.83	■□□□□ 0.61
GRN-222	ENST00000639447	ZNF609	O15014	1411 aa		18.83	■□□□□ 0.6
GRN-222	ENST00000639447	SAPCD2	Q86UD0	394 aa		18.82	■□□□□ 0.6
GRN-222	ENST00000639447	WDR63	Q8IWG1	891 aa		18.82	■□□□□ 0.6
GRN-222	ENST00000639447	TTLL11	Q8NHH1	800 aa		18.82	■□□□□ 0.6
GRN-222	ENST00000639447	KCNQ5	Q9NR82	932 aa		18.82	■□□□□ 0.6
GRN-222	ENST00000639447	HSPA8	P11142	646 aa	Known RBP	18.81	■□□□□ 0.6
GRN-222	ENST00000639447	LBX1	P52954	281 aa		18.81	■□□□□ 0.6
GRN-222	ENST00000639447	RBM26	Q5T8P6	1007 aa	Known RBP	18.81	■□□□□ 0.6
GRN-222	ENST00000639447	USP48	Q86UV5	1035 aa		18.81	■□□□□ 0.6
GRN-222	ENST00000639447	MED23	Q9ULK4	1368 aa		18.81	■□□□□ 0.6
GRN-222	ENST00000639447	SPEF2	Q9C093	1822 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447	EGFR	P00533	1210 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447	VIL1	P09327	827 aa	Known RBP	18.8	■□□□□ 0.6
GRN-222	ENST00000639447	IGHMBP2	P38935	993 aa	Known RBP	18.8	■□□□□ 0.6
GRN-222	ENST00000639447	GCKR	Q14397	625 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447	KRT26	Q7Z3Y9	468 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447	DNAAF4	Q8WXU2	420 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447	DCPS	Q96C86	337 aa	Known RBP	18.8	■□□□□ 0.6
GRN-222	ENST00000639447	HHIPL1	Q96JK4	782 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447	MYH3	P11055	1940 aa		18.8	■□□□□ 0.6
GRN-222	ENST00000639447		H7C1W4	665 aa		18.79	■□□□□ 0.6
GRN-222	ENST00000639447	EXOSC9	Q06265	439 aa	Known RBP	18.79	■□□□□ 0.6
GRN-222	ENST00000639447	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.79	■□□□□ 0.6
GRN-222	ENST00000639447	BSDC1	Q9NW68	430 aa	Predicted RBP	18.79	■□□□□ 0.6
GRN-222	ENST00000639447	GGA3	Q9NZ52	723 aa		18.79	■□□□□ 0.6
GRN-222	ENST00000639447	SCN9A	Q15858	1988 aa		18.79	■□□□□ 0.6
GRN-222	ENST00000639447	ADM5	C9JUS6	153 aa		18.78	■□□□□ 0.6
GRN-222	ENST00000639447	AOC2	O75106	756 aa		18.78	■□□□□ 0.6
GRN-222	ENST00000639447	FAM161A	Q3B820	660 aa		18.78	■□□□□ 0.6
GRN-222	ENST00000639447	AGBL3	Q8NEM8	1001 aa		18.78	■□□□□ 0.6
GRN-222	ENST00000639447	LINS1	Q8NG48	757 aa		18.78	■□□□□ 0.6
GRN-222	ENST00000639447	MINPP1	Q9UNW1	487 aa		18.78	■□□□□ 0.6
GRN-222	ENST00000639447	VAMP4	O75379	141 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	MAP2K2	P36507	400 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	HUNK	P57058	714 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	PODN	Q7Z5L7	613 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	SULF1	Q8IWU6	871 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	PLA2G12B	Q9BX93	195 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	PSME4	Q14997	1843 aa		18.77	■□□□□ 0.6
GRN-222	ENST00000639447	USP17L3	A6NCW0	530 aa		18.76	■□□□□ 0.59
GRN-222	ENST00000639447	USP17L4	A6NCW7	530 aa		18.76	■□□□□ 0.59
GRN-222	ENST00000639447	ITGA6	P23229	1130 aa		18.76	■□□□□ 0.59
GRN-222	ENST00000639447	CCT4	P50991	539 aa	Known RBP	18.76	■□□□□ 0.59
GRN-222	ENST00000639447	USP17L1	Q7RTZ2	530 aa		18.76	■□□□□ 0.59
GRN-222	ENST00000639447	ZNF280A	P59817	542 aa	Predicted RBP	18.75	■□□□□ 0.59
GRN-222	ENST00000639447	DLK2	Q6UY11	383 aa		18.75	■□□□□ 0.59
GRN-222	ENST00000639447	FAM9B	Q8IZU0	186 aa		18.75	■□□□□ 0.59
GRN-222	ENST00000639447	FBXW7	Q969H0	707 aa		18.75	■□□□□ 0.59
GRN-222	ENST00000639447	MPHOSPH8	Q99549	860 aa		18.75	■□□□□ 0.59
GRN-222	ENST00000639447	GBA2	Q9HCG7	927 aa	Predicted RBP	18.75	■□□□□ 0.59

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