RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 EFCAB13Q8IY85 973 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 SYKP43405 635 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 EXOC6BQ9Y2D4 811 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 STK38LQ9Y2H1 464 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 F13A1P00488 732 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 TNNC1P63316 161 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 RUFY3Q7L099 469 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 GSDMBQ8TAX9 411 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 ABTB1Q969K4 478 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 ZNF131P52739 623 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 CCDC63Q8NA47 563 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 N4BP2L2Q92802 583 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 ZKSCAN8Q15776 578 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 FYB2Q5VWT5 728 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 VSIG1Q86XK7 387 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 POLR3DP05423 398 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 CCT2P78371 535 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 PPFIA1Q13136 1202 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 BAG1Q99933 345 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 RPGRIP1LQ68CZ1 1315 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 ATP5DP30049 168 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 FKBP4Q02790 459 aaKnown RBP eCLIP12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 FLIIQ13045 1269 aa12.36□□□□□ -0.43
KCNMA1-259ENST00000639406 DNM1Q05193 864 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 ICE2Q659A1 982 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 TRIM47Q96LD4 638 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 OPHN1O60890 802 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 GNGT1P63211 74 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 MCTP2Q6DN12 878 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 STAG1Q8WVM7 1258 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 MRPS27Q92552 414 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 RAB3IPQ96QF0 476 aaPredicted RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 UBA5Q9GZZ9 404 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 HIP1RO75146 1068 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 STMN1P16949 149 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 FHOD3Q2V2M9 1422 aa12.35□□□□□ -0.43
KCNMA1-259ENST00000639406 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 ARHGAP24Q8N264 748 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 TTC36A6NLP5 189 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 KIF1CO43896 1103 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 SPAG1Q07617 926 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 PPP1R7Q15435 360 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 LMBR1Q8WVP7 490 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 PRPHP41219 470 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 PYM1Q9BRP8 204 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 HGSO14964 777 aaPredicted RBP12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 ZNF445P59923 1031 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 GPR161Q8N6U8 529 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 VCX3AQ9NNX9 186 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 RMND1Q9NWS8 449 aa12.34□□□□□ -0.43
KCNMA1-259ENST00000639406 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 NUF2Q9BZD4 464 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 TSGA10Q9BZW7 698 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 CFTRP13569 1480 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 LOC102724159A0A0B4J2E5 919 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 PWP2Q15269 919 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 PRR16Q569H4 304 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC25Q86WR0 208 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 KIF1BPQ96EK5 621 aa12.33□□□□□ -0.44
KCNMA1-259ENST00000639406 AMPD3Q01432 767 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 BRD3Q15059 726 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 LARSQ9P2J5 1176 aaKnown RBP12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 IDEP14735 1019 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 TMED1Q13445 227 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 IRAK4Q9NWZ3 460 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 ACTN2P35609 894 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC62Q6P9F0 684 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 A0A087WUV0 522 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms