RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
LINC02001-202ENST00000638682 A0A087WZG4 1122 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 EIF5P55010 431 aaKnown RBP13.84□□□□□ -0.19
LINC02001-202ENST00000638682 TCIRG1Q13488 830 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 USPL1Q5W0Q7 1092 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 CCDC191Q8NCU4 936 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 KAZALD1Q96I82 304 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
LINC02001-202ENST00000638682 MYH3P11055 1940 aa13.83□□□□□ -0.2
LINC02001-202ENST00000638682 SMARCA5O60264 1052 aaPredicted RBP13.83□□□□□ -0.2
LINC02001-202ENST00000638682 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
LINC02001-202ENST00000638682 JARID2Q92833 1246 aaPredicted RBP13.83□□□□□ -0.2
LINC02001-202ENST00000638682 ISCA1Q9BUE6 129 aa13.83□□□□□ -0.2
LINC02001-202ENST00000638682 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
LINC02001-202ENST00000638682 NARFQ9UHQ1 456 aa13.83□□□□□ -0.2
LINC02001-202ENST00000638682 CASP7P55210 303 aa13.82□□□□□ -0.2
LINC02001-202ENST00000638682 GPR153Q6NV75 609 aa13.82□□□□□ -0.2
LINC02001-202ENST00000638682 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
LINC02001-202ENST00000638682 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
LINC02001-202ENST00000638682 ZNF687Q8N1G0 1237 aa13.82□□□□□ -0.2
LINC02001-202ENST00000638682 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
LINC02001-202ENST00000638682 H7C1W4 665 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 SURF6O75683 361 aaKnown RBP13.81□□□□□ -0.2
LINC02001-202ENST00000638682 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 NLGN2Q8NFZ4 835 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 BCL11AQ9H165 835 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
LINC02001-202ENST00000638682 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
LINC02001-202ENST00000638682 RAB11FIP3O75154 756 aa13.8□□□□□ -0.2
LINC02001-202ENST00000638682 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
LINC02001-202ENST00000638682 HLFQ16534 295 aa13.8□□□□□ -0.2
LINC02001-202ENST00000638682 C16orf71Q8IYS4 520 aaPredicted RBP13.8□□□□□ -0.2
LINC02001-202ENST00000638682 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
LINC02001-202ENST00000638682 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
LINC02001-202ENST00000638682 PLEKHM2Q8IWE5 1019 aa13.8□□□□□ -0.2
LINC02001-202ENST00000638682 RNF166Q96A37 237 aaPredicted RBP13.8□□□□□ -0.2
LINC02001-202ENST00000638682 NOP58Q9Y2X3 529 aaKnown RBP13.8□□□□□ -0.2
LINC02001-202ENST00000638682 DDR1Q08345 913 aa13.79□□□□□ -0.2
LINC02001-202ENST00000638682 OTUD7AQ8TE49 926 aaPredicted RBP13.79□□□□□ -0.2
LINC02001-202ENST00000638682 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
LINC02001-202ENST00000638682 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
LINC02001-202ENST00000638682 GPTP24298 496 aa13.78□□□□□ -0.2
LINC02001-202ENST00000638682 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
LINC02001-202ENST00000638682 NFIXQ14938 502 aa13.78□□□□□ -0.2
LINC02001-202ENST00000638682 RABL6Q3YEC7 729 aaPredicted RBP13.78□□□□□ -0.2
LINC02001-202ENST00000638682 RTL5Q5HYW3 569 aaPredicted RBP13.78□□□□□ -0.2
LINC02001-202ENST00000638682 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
LINC02001-202ENST00000638682 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
LINC02001-202ENST00000638682 POLRMTO00411 1230 aaKnown RBP13.77□□□□□ -0.21
LINC02001-202ENST00000638682 BMP2KLQ5H9B9 411 aa13.77□□□□□ -0.21
LINC02001-202ENST00000638682 NLRP10Q86W26 655 aa13.77□□□□□ -0.21
LINC02001-202ENST00000638682 KIF1BPQ96EK5 621 aa13.77□□□□□ -0.21
LINC02001-202ENST00000638682 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
LINC02001-202ENST00000638682 ZNF652Q9Y2D9 606 aa13.77□□□□□ -0.21
LINC02001-202ENST00000638682 CARMIL3Q8ND23 1372 aa13.77□□□□□ -0.21
LINC02001-202ENST00000638682 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
LINC02001-202ENST00000638682 FOXO4P98177 505 aa13.76□□□□□ -0.21
LINC02001-202ENST00000638682 RHPN1Q8TCX5 695 aa13.76□□□□□ -0.21
LINC02001-202ENST00000638682 KIF13BQ9NQT8 1826 aa13.76□□□□□ -0.21
LINC02001-202ENST00000638682 LAMB2P55268 1798 aa13.76□□□□□ -0.21
LINC02001-202ENST00000638682 TM4SF1P30408 202 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 TTC22Q5TAA0 569 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 TBC1D9BQ66K14 1250 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 ZBTB38Q8NAP3 1195 aaPredicted RBP13.75□□□□□ -0.21
LINC02001-202ENST00000638682 IL1RAPL2Q9NP60 686 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 NRXN2Q9P2S2 1712 aa13.75□□□□□ -0.21
LINC02001-202ENST00000638682 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
LINC02001-202ENST00000638682 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC02001-202ENST00000638682 GPR162Q16538 588 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 CHMP3Q9Y3E7 222 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 DDX60Q8IY21 1712 aaKnown RBP13.74□□□□□ -0.21
LINC02001-202ENST00000638682 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 UBN2Q6ZU65 1347 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 SALL3Q9BXA9 1300 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 NPHP1O15259 732 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 PDE1AP54750 535 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 ARSIQ5FYB1 569 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 KLHDC4Q8TBB5 520 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 SIL1Q9H173 461 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 COPRSQ9NQ92 184 aa13.74□□□□□ -0.21
LINC02001-202ENST00000638682 SERPINB2P05120 415 aa13.73□□□□□ -0.21
LINC02001-202ENST00000638682 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
LINC02001-202ENST00000638682 MX1P20591 662 aa13.73□□□□□ -0.21
LINC02001-202ENST00000638682 SETDB2Q96T68 719 aa13.73□□□□□ -0.21
LINC02001-202ENST00000638682 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
LINC02001-202ENST00000638682 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
LINC02001-202ENST00000638682 TRMT112Q9UI30 125 aaKnown RBP13.73□□□□□ -0.21
LINC02001-202ENST00000638682 WWC3Q9ULE0 1092 aa13.73□□□□□ -0.21
LINC02001-202ENST00000638682 TGFB2P61812 414 aa13.72□□□□□ -0.21
LINC02001-202ENST00000638682 PTPN12Q05209 780 aaKnown RBP13.72□□□□□ -0.21
LINC02001-202ENST00000638682 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms