RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 FLIIQ13045 1269 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 DOK7Q18PE1 504 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 DEFB115Q30KQ5 88 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 ANKRD18AQ8IVF6 992 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 TRPM4Q8TD43 1214 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 ZC3H12CQ9C0D7 883 aaKnown RBP25.73■■□□□ 1.71
CLN6-222ENST00000637667 GGA1Q9UJY5 639 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 ZBTB12Q9Y330 459 aaPredicted RBP25.73■■□□□ 1.71
CLN6-222ENST00000637667 SHTN1A0MZ66 631 aa25.72■■□□□ 1.71
CLN6-222ENST00000637667 H7C1D1 291 aa25.72■■□□□ 1.71
CLN6-222ENST00000637667 HIRAP54198 1017 aaPredicted RBP25.72■■□□□ 1.71
CLN6-222ENST00000637667 MICALL2Q8IY33 904 aa25.72■■□□□ 1.71
CLN6-222ENST00000637667 DPF2Q92785 391 aa25.72■■□□□ 1.71
CLN6-222ENST00000637667 PGAP2Q9UHJ9 254 aa25.72■■□□□ 1.71
CLN6-222ENST00000637667 ZC3H15Q8WU90 426 aaKnown RBP25.71■■□□□ 1.71
CLN6-222ENST00000637667 VAMP4O75379 141 aa25.7■■□□□ 1.7
CLN6-222ENST00000637667 TTLL11Q8NHH1 800 aa25.7■■□□□ 1.7
CLN6-222ENST00000637667 CDC5LQ99459 802 aaKnown RBP25.7■■□□□ 1.7
CLN6-222ENST00000637667 KCNQ5Q9NR82 932 aa25.7■■□□□ 1.7
CLN6-222ENST00000637667 RTL9Q8NET4 1388 aa25.69■■□□□ 1.7
CLN6-222ENST00000637667 H7C1W4 665 aa25.69■■□□□ 1.7
CLN6-222ENST00000637667 EXOSC9Q06265 439 aaKnown RBP25.69■■□□□ 1.7
CLN6-222ENST00000637667 FKBP5Q13451 457 aaPredicted RBP25.69■■□□□ 1.7
CLN6-222ENST00000637667 CST9Q5W186 159 aa25.69■■□□□ 1.7
CLN6-222ENST00000637667 UBE3BQ7Z3V4 1068 aa25.69■■□□□ 1.7
CLN6-222ENST00000637667 XDHP47989 1333 aa25.68■■□□□ 1.7
CLN6-222ENST00000637667 RPS12P25398 132 aaKnown RBP25.68■■□□□ 1.7
CLN6-222ENST00000637667 FAM9BQ8IZU0 186 aa25.68■■□□□ 1.7
CLN6-222ENST00000637667 TNS4Q8IZW8 715 aa25.68■■□□□ 1.7
CLN6-222ENST00000637667 DNAAF4Q8WXU2 420 aa25.68■■□□□ 1.7
CLN6-222ENST00000637667 GLIS2Q9BZE0 524 aaPredicted RBP25.68■■□□□ 1.7
CLN6-222ENST00000637667 GREM2Q9H772 168 aa25.68■■□□□ 1.7
CLN6-222ENST00000637667 G3V3G9 751 aa25.67■■□□□ 1.7
CLN6-222ENST00000637667 GCKRQ14397 625 aa25.67■■□□□ 1.7
CLN6-222ENST00000637667 DCAF8Q5TAQ9 597 aa25.67■■□□□ 1.7
CLN6-222ENST00000637667 SPINK5Q9NQ38 1064 aaPredicted RBP25.67■■□□□ 1.7
CLN6-222ENST00000637667 FOXN1O15353 648 aa25.66■■□□□ 1.7
CLN6-222ENST00000637667 SAMD7Q7Z3H4 446 aa25.66■■□□□ 1.7
CLN6-222ENST00000637667 WDR33Q9C0J8 1336 aaKnown RBP25.65■■□□□ 1.7
CLN6-222ENST00000637667 CELF2O95319 508 aaKnown RBP25.65■■□□□ 1.7
CLN6-222ENST00000637667 VIL1P09327 827 aaKnown RBP25.65■■□□□ 1.7
CLN6-222ENST00000637667 ATP2B4P23634 1241 aa25.65■■□□□ 1.7
CLN6-222ENST00000637667 AIDAQ96BJ3 306 aa25.65■■□□□ 1.7
CLN6-222ENST00000637667 MYH16Q9H6N6 1097 aa25.65■■□□□ 1.7
CLN6-222ENST00000637667 BSDC1Q9NW68 430 aaPredicted RBP25.65■■□□□ 1.7
CLN6-222ENST00000637667 TLL2Q9Y6L7 1015 aa25.65■■□□□ 1.7
CLN6-222ENST00000637667 TBC1D10BQ4KMP7 808 aaPredicted RBP25.64■■□□□ 1.7
CLN6-222ENST00000637667 CDC37L1Q7L3B6 337 aa25.64■■□□□ 1.7
CLN6-222ENST00000637667 LINS1Q8NG48 757 aa25.64■■□□□ 1.7
CLN6-222ENST00000637667 PLA2G12BQ9BX93 195 aa25.64■■□□□ 1.7
CLN6-222ENST00000637667 WBP1LQ9NX94 342 aa25.64■■□□□ 1.7
CLN6-222ENST00000637667 CASP7P55210 303 aa25.63■■□□□ 1.69
CLN6-222ENST00000637667 PAXIP1Q6ZW49 1069 aaPredicted RBP25.63■■□□□ 1.69
CLN6-222ENST00000637667 CAPNS2Q96L46 248 aa25.63■■□□□ 1.69
CLN6-222ENST00000637667 MINPP1Q9UNW1 487 aa25.63■■□□□ 1.69
CLN6-222ENST00000637667 EGFRP00533 1210 aa25.62■■□□□ 1.69
CLN6-222ENST00000637667 ECE1P42892 770 aa25.62■■□□□ 1.69
CLN6-222ENST00000637667 TRPM7Q96QT4 1865 aa25.62■■□□□ 1.69
CLN6-222ENST00000637667 SCN9AQ15858 1988 aa25.6■■□□□ 1.69
CLN6-222ENST00000637667 IGHMBP2P38935 993 aaKnown RBP25.6■■□□□ 1.69
CLN6-222ENST00000637667 CTCFP49711 727 aaPredicted RBP25.6■■□□□ 1.69
CLN6-222ENST00000637667 RBM26Q5T8P6 1007 aaKnown RBP25.6■■□□□ 1.69
CLN6-222ENST00000637667 CYP4F22Q6NT55 531 aa25.6■■□□□ 1.69
CLN6-222ENST00000637667 USP48Q86UV5 1035 aa25.6■■□□□ 1.69
CLN6-222ENST00000637667 WTIPA6NIX2 430 aaPredicted RBP25.59■■□□□ 1.69
CLN6-222ENST00000637667 MAP2K1Q02750 393 aaPredicted RBP25.59■■□□□ 1.69
CLN6-222ENST00000637667 FAM161AQ3B820 660 aa25.59■■□□□ 1.69
CLN6-222ENST00000637667 RSBN1LQ6PCB5 846 aaPredicted RBP25.59■■□□□ 1.69
CLN6-222ENST00000637667 SAPCD2Q86UD0 394 aa25.59■■□□□ 1.69
CLN6-222ENST00000637667 ZNF408Q9H9D4 720 aa25.59■■□□□ 1.69
CLN6-222ENST00000637667 CACNA1FO60840 1977 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 F6X3S4 739 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 CSF1RP07333 972 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 ITGA6P23229 1130 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 GRM1Q13255 1194 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 KIF4BQ2VIQ3 1234 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 KRT26Q7Z3Y9 468 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 PODNQ7Z5L7 613 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 AGBL3Q8NEM8 1001 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 PRDM10Q9NQV6 1147 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 MYH3P11055 1940 aa25.58■■□□□ 1.69
CLN6-222ENST00000637667 MED23Q9ULK4 1368 aa25.57■■□□□ 1.68
CLN6-222ENST00000637667 ZNF609O15014 1411 aa25.57■■□□□ 1.68
CLN6-222ENST00000637667 CCT4P50991 539 aaKnown RBP25.57■■□□□ 1.68
CLN6-222ENST00000637667 ZNF280AP59817 542 aaPredicted RBP25.56■■□□□ 1.68
CLN6-222ENST00000637667 BEND3Q5T5X7 828 aa25.56■■□□□ 1.68
CLN6-222ENST00000637667 USP17L3A6NCW0 530 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 USP17L4A6NCW7 530 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 DLK2Q6UY11 383 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 USP17L1Q7RTZ2 530 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 DCPSQ96C86 337 aaKnown RBP25.55■■□□□ 1.68
CLN6-222ENST00000637667 HHIPL1Q96JK4 782 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 GMLQ99445 158 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 MPHOSPH8Q99549 860 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 LEMD3Q9Y2U8 911 aa25.55■■□□□ 1.68
CLN6-222ENST00000637667 ANKRD2Q9GZV1 360 aa25.54■■□□□ 1.68
CLN6-222ENST00000637667 ZNF521Q96K83 1311 aa25.54■■□□□ 1.68
CLN6-222ENST00000637667 GGA3Q9NZ52 723 aa25.53■■□□□ 1.68
CLN6-222ENST00000637667 ANKRD18BA2A2Z9 1011 aa25.52■■□□□ 1.68
CLN6-222ENST00000637667 ADM5C9JUS6 153 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms