RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 SEPT10Q9P0V9 454 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 V9GYY5 206 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 B4DLN1 442 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 MRPL12P52815 198 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 SFMBT1Q9UHJ3 866 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 HSPA1LP34931 641 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 METAP2P50579 478 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 SARNPP82979 210 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 PLVAPQ9BX97 442 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 TRIM7Q9C029 511 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 DCAF17Q5H9S7 520 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 DUSP27Q5VZP5 1158 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 FAM114A1Q8IWE2 563 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 ANO10Q9NW15 660 aa18.43■□□□□ 0.54
CACNA1A-240ENST00000637432 TMTC4Q5T4D3 741 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 CCDC170Q8IYT3 715 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 HYPKQ9NX55 129 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 FEZ2Q9UHY8 353 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 F6X3S4 739 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 USP37Q86T82 979 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 CCDC172P0C7W6 258 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 NAPAP54920 295 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 GSTO1P78417 241 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 C16orf45Q96MC5 204 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 SELENOOQ9BVL4 669 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
CACNA1A-240ENST00000637432 CHMP2AO43633 222 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 CHST3Q7LGC8 479 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 PARD3BQ8TEW8 1205 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 SPAG5Q96R06 1193 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 LDHCP07864 332 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 IFI16Q16666 785 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 CYP7A1P22680 504 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
CACNA1A-240ENST00000637432 KIF18AQ8NI77 898 aa18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 FOXD4Q12950 439 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 SLC8A3P57103 927 aa18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 WDR63Q8IWG1 891 aa18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 PPP1R7Q15435 360 aa18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 ZSCAN31Q96LW9 406 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 SBNO2Q9Y2G9 1366 aa18.4■□□□□ 0.54
CACNA1A-240ENST00000637432 PDCL2Q8N4E4 241 aa18.39■□□□□ 0.54
CACNA1A-240ENST00000637432 NAIPQ13075 1403 aa18.39■□□□□ 0.54
CACNA1A-240ENST00000637432 CCDC152Q4G0S7 254 aa18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 ZC3H12CQ9C0D7 883 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 RASAL2Q9UJF2 1139 aa18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 CCDC169A6NNP5 214 aa18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 MYCLP12524 364 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 ITM2BQ9Y287 266 aa18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 USP16Q9Y5T5 823 aa18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 BZW2Q9Y6E2 419 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-240ENST00000637432 SPDYE2BA6NHP3 402 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 SPDYE6P0CI01 402 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 SEC62Q99442 399 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 CASC4Q6P4E1 433 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 WDR46O15213 610 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 PDE1CQ14123 709 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 CAPZA3Q96KX2 299 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 IARSP41252 1262 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
CACNA1A-240ENST00000637432 M0QZ92 97 aa18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 HGSO14964 777 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 PDIA4P13667 645 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 BIRC3Q13489 604 aa18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 ATP6V1E1P36543 226 aa18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 DNAJC21Q5F1R6 531 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 EIF6P56537 245 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 LRRC2Q9BYS8 371 aa18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 GTF2F1P35269 517 aaKnown RBP eCLIP18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
CACNA1A-240ENST00000637432 FBXW4P57775 412 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 GRPEL1Q9HAV7 217 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 ATP6V0A2Q9Y487 856 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 RRAGBQ5VZM2 374 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 PLCB4Q15147 1175 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 WHAMMQ8TF30 809 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 RAPGEF3O95398 923 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 WTAPQ15007 396 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 ATP2A1O14983 1001 aa18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-240ENST00000637432 FNBP1Q96RU3 617 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms