RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
CLN6-217ENST00000636964 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 CSF1RP07333 972 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 SUSD4Q5VX71 490 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 ZNF34Q8IZ26 560 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
CLN6-217ENST00000636964 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.8□□□□□ -0.2
CLN6-217ENST00000636964 RAD50Q92878 1312 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
CLN6-217ENST00000636964 LINC00116Q8NCU8 138 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 ZNF592Q92610 1267 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 SPATA31A6Q5VVP1 1343 aa13.8□□□□□ -0.2
CLN6-217ENST00000636964 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
CLN6-217ENST00000636964 NUP98P52948 1817 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 CTSWP56202 376 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 SLFNL1Q499Z3 407 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 FAM193AP78312 1265 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 SNX14Q9Y5W7 946 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 ADORA1P30542 326 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
CLN6-217ENST00000636964 ZSCAN30Q86W11 494 aa13.79□□□□□ -0.2
CLN6-217ENST00000636964 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
CLN6-217ENST00000636964 NIP7Q9Y221 180 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLN6-217ENST00000636964 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 GOLIM4O00461 696 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 CIAO1O76071 339 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 CPA1P15085 419 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 ANAPC15P60006 121 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
CLN6-217ENST00000636964 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 AFF2P51816 1311 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 KCNJ4P48050 445 aa13.78□□□□□ -0.2
CLN6-217ENST00000636964 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
CLN6-217ENST00000636964 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
CLN6-217ENST00000636964 PDE8AO60658 829 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 RAB3GAP1Q15042 981 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 GORABQ5T7V8 394 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.2
CLN6-217ENST00000636964 HAUS7Q99871 368 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 SNRKQ9NRH2 765 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 CNNM1Q9NRU3 951 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.2
CLN6-217ENST00000636964 ANKRD18BA2A2Z9 1011 aa13.77□□□□□ -0.21
CLN6-217ENST00000636964 METTL24Q5JXM2 366 aa13.77□□□□□ -0.21
CLN6-217ENST00000636964 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
CLN6-217ENST00000636964 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
CLN6-217ENST00000636964 HIP1O00291 1037 aa13.76□□□□□ -0.21
CLN6-217ENST00000636964 IRX3P78415 501 aaPredicted RBP13.76□□□□□ -0.21
CLN6-217ENST00000636964 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
CLN6-217ENST00000636964 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
CLN6-217ENST00000636964 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
CLN6-217ENST00000636964 GPR108Q9NPR9 543 aa13.76□□□□□ -0.21
CLN6-217ENST00000636964 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
CLN6-217ENST00000636964 IFIT1P09914 478 aaKnown RBP13.76□□□□□ -0.21
CLN6-217ENST00000636964 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLN6-217ENST00000636964 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
CLN6-217ENST00000636964 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
CLN6-217ENST00000636964 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
CLN6-217ENST00000636964 ADCK5Q3MIX3 580 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
CLN6-217ENST00000636964 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 ZNF609O15014 1411 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 ARID3AQ99856 593 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 SEC31BQ9NQW1 1179 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
CLN6-217ENST00000636964 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
CLN6-217ENST00000636964 APPP05067 770 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 SSFA2P28290 1259 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 PKP1Q13835 747 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 FAM43BQ6ZT52 329 aaPredicted RBP13.74□□□□□ -0.21
CLN6-217ENST00000636964 SNAP23O00161 211 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
CLN6-217ENST00000636964 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
CLN6-217ENST00000636964 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 ANKRD36CQ5JPF3 1778 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
CLN6-217ENST00000636964 SCARF1Q14162 830 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 KBTBD3Q8NAB2 608 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 MAP4K1Q92918 833 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 JAKMIP1Q96N16 626 aaKnown RBP13.74□□□□□ -0.21
CLN6-217ENST00000636964 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
CLN6-217ENST00000636964 TERF1P54274 439 aa13.73□□□□□ -0.21
CLN6-217ENST00000636964 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
CLN6-217ENST00000636964 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
CLN6-217ENST00000636964 CREB3L3Q68CJ9 461 aa13.73□□□□□ -0.21
CLN6-217ENST00000636964 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
CLN6-217ENST00000636964 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
CLN6-217ENST00000636964 DTNBO60941 627 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms