RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 XDHP47989 1333 aa24.13■■□□□ 1.45
CLN6-213ENST00000636212 LTBP1Q14766 1721 aa24.13■■□□□ 1.45
CLN6-213ENST00000636212 H7C1D1 291 aa24.13■■□□□ 1.45
CLN6-213ENST00000636212 ECE2O60344 883 aa24.13■■□□□ 1.45
CLN6-213ENST00000636212 YDJCA8MPS7 323 aa24.12■■□□□ 1.45
CLN6-213ENST00000636212 DOK7Q18PE1 504 aa24.12■■□□□ 1.45
CLN6-213ENST00000636212 COL4A1P02462 1669 aa24.11■■□□□ 1.45
CLN6-213ENST00000636212 IGHMBP2P38935 993 aaKnown RBP24.11■■□□□ 1.45
CLN6-213ENST00000636212 GREM2Q9H772 168 aa24.11■■□□□ 1.45
CLN6-213ENST00000636212 MKRN1Q9UHC7 482 aaKnown RBP24.11■■□□□ 1.45
CLN6-213ENST00000636212 MYH3P11055 1940 aa24.11■■□□□ 1.45
CLN6-213ENST00000636212 RTL9Q8NET4 1388 aa24.11■■□□□ 1.45
CLN6-213ENST00000636212 ATP2B4P23634 1241 aa24.1■■□□□ 1.45
CLN6-213ENST00000636212 PLA2G12BQ9BX93 195 aa24.1■■□□□ 1.45
CLN6-213ENST00000636212 BSDC1Q9NW68 430 aaPredicted RBP24.1■■□□□ 1.45
CLN6-213ENST00000636212 CNOT7Q9UIV1 285 aaKnown RBP24.1■■□□□ 1.45
CLN6-213ENST00000636212 PSMD14O00487 310 aa24.09■■□□□ 1.45
CLN6-213ENST00000636212 RPS12P25398 132 aaKnown RBP24.09■■□□□ 1.45
CLN6-213ENST00000636212 DPF2Q92785 391 aa24.09■■□□□ 1.45
CLN6-213ENST00000636212 GPR101Q96P66 508 aaPredicted RBP24.09■■□□□ 1.45
CLN6-213ENST00000636212 ZNF521Q96K83 1311 aa24.08■■□□□ 1.44
CLN6-213ENST00000636212 CNTNAP1P78357 1384 aa24.07■■□□□ 1.44
CLN6-213ENST00000636212 E9PSI1 815 aa24.07■■□□□ 1.44
CLN6-213ENST00000636212 F6X3S4 739 aa24.07■■□□□ 1.44
CLN6-213ENST00000636212 MICALL2Q8IY33 904 aa24.07■■□□□ 1.44
CLN6-213ENST00000636212 ZC3H15Q8WU90 426 aaKnown RBP24.07■■□□□ 1.44
CLN6-213ENST00000636212 MPHOSPH8Q99549 860 aa24.07■■□□□ 1.44
CLN6-213ENST00000636212 ABT1Q9ULW3 272 aaKnown RBP24.07■■□□□ 1.44
CLN6-213ENST00000636212 ZBTB12Q9Y330 459 aaPredicted RBP24.07■■□□□ 1.44
CLN6-213ENST00000636212 ITGA6P23229 1130 aa24.06■■□□□ 1.44
CLN6-213ENST00000636212 IFFO2Q5TF58 517 aa24.06■■□□□ 1.44
CLN6-213ENST00000636212 MINPP1Q9UNW1 487 aa24.06■■□□□ 1.44
CLN6-213ENST00000636212 CASP7P55210 303 aa24.05■■□□□ 1.44
CLN6-213ENST00000636212 BEND3Q5T5X7 828 aa24.05■■□□□ 1.44
CLN6-213ENST00000636212 ANKRD18BA2A2Z9 1011 aa24.04■■□□□ 1.44
CLN6-213ENST00000636212 DEFB115Q30KQ5 88 aa24.04■■□□□ 1.44
CLN6-213ENST00000636212 SLC4A10Q6U841 1118 aa24.04■■□□□ 1.44
CLN6-213ENST00000636212 ANKRD2Q9GZV1 360 aa24.04■■□□□ 1.44
CLN6-213ENST00000636212 C9orf78Q9NZ63 289 aaPredicted RBP24.04■■□□□ 1.44
CLN6-213ENST00000636212 CHMP3Q9Y3E7 222 aa24.04■■□□□ 1.44
CLN6-213ENST00000636212 CSF1RP07333 972 aa24.03■■□□□ 1.44
CLN6-213ENST00000636212 CCT4P50991 539 aaKnown RBP24.03■■□□□ 1.44
CLN6-213ENST00000636212 FAM161AQ3B820 660 aa24.03■■□□□ 1.44
CLN6-213ENST00000636212 CCER2I3L3R5 266 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 ALDH1L1O75891 902 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 VIL1P09327 827 aaKnown RBP24.02■■□□□ 1.44
CLN6-213ENST00000636212 HSPA1AP0DMV8 641 aaKnown RBP24.02■■□□□ 1.44
CLN6-213ENST00000636212 HSPA1BP0DMV9 641 aaKnown RBP24.02■■□□□ 1.44
CLN6-213ENST00000636212 PODNQ7Z5L7 613 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 TRPM4Q8TD43 1214 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 SRCIN1Q9C0H9 1055 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 KCNQ5Q9NR82 932 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 PGAP2Q9UHJ9 254 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 LEMD3Q9Y2U8 911 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 MED23Q9ULK4 1368 aa24.02■■□□□ 1.44
CLN6-213ENST00000636212 SPEF2Q9C093 1822 aa24.01■■□□□ 1.43
CLN6-213ENST00000636212 IFIT5Q13325 482 aaKnown RBP24.01■■□□□ 1.43
CLN6-213ENST00000636212 CDC37L1Q7L3B6 337 aa24.01■■□□□ 1.43
CLN6-213ENST00000636212 RASSF10A6NK89 507 aa24■■□□□ 1.43
CLN6-213ENST00000636212 GRM8O00222 908 aa24■■□□□ 1.43
CLN6-213ENST00000636212 TRAF5O00463 557 aa24■■□□□ 1.43
CLN6-213ENST00000636212 KCNJ4P48050 445 aa24■■□□□ 1.43
CLN6-213ENST00000636212 HIRAP54198 1017 aaPredicted RBP24■■□□□ 1.43
CLN6-213ENST00000636212 SHTN1A0MZ66 631 aa23.99■■□□□ 1.43
CLN6-213ENST00000636212 VEGFBP49765 207 aa23.99■■□□□ 1.43
CLN6-213ENST00000636212 TBC1D10BQ4KMP7 808 aaPredicted RBP23.99■■□□□ 1.43
CLN6-213ENST00000636212 RBM26Q5T8P6 1007 aaKnown RBP23.99■■□□□ 1.43
CLN6-213ENST00000636212 RSBN1LQ6PCB5 846 aaPredicted RBP23.99■■□□□ 1.43
CLN6-213ENST00000636212 PAXIP1Q6ZW49 1069 aaPredicted RBP23.99■■□□□ 1.43
CLN6-213ENST00000636212 SAMD7Q7Z3H4 446 aa23.99■■□□□ 1.43
CLN6-213ENST00000636212 AGBL3Q8NEM8 1001 aa23.99■■□□□ 1.43
CLN6-213ENST00000636212 GLIS2Q9BZE0 524 aaPredicted RBP23.99■■□□□ 1.43
CLN6-213ENST00000636212 USP17L3A6NCW0 530 aa23.98■■□□□ 1.43
CLN6-213ENST00000636212 USP17L4A6NCW7 530 aa23.98■■□□□ 1.43
CLN6-213ENST00000636212 SLFN5Q08AF3 891 aa23.98■■□□□ 1.43
CLN6-213ENST00000636212 TAF7LQ5H9L4 462 aa23.98■■□□□ 1.43
CLN6-213ENST00000636212 USP17L1Q7RTZ2 530 aa23.98■■□□□ 1.43
CLN6-213ENST00000636212 ZNF804BA4D1E1 1349 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 CELF2O95319 508 aaKnown RBP23.97■■□□□ 1.43
CLN6-213ENST00000636212 PTPRCP08575 1304 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 ECE1P42892 770 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 FOXO4P98177 505 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 FMR1Q06787 632 aaKnown RBP eCLIP23.97■■□□□ 1.43
CLN6-213ENST00000636212 CCDC57Q2TAC2 916 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 KIF4BQ2VIQ3 1234 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 AIDAQ96BJ3 306 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
CLN6-213ENST00000636212 COA1Q9GZY4 146 aa23.97■■□□□ 1.43
CLN6-213ENST00000636212 TRPM7Q96QT4 1865 aa23.96■■□□□ 1.43
CLN6-213ENST00000636212 LMBR1LQ6UX01 489 aa23.96■■□□□ 1.43
CLN6-213ENST00000636212 MRPL50Q8N5N7 158 aaKnown RBP23.96■■□□□ 1.43
CLN6-213ENST00000636212 FBXW7Q969H0 707 aa23.96■■□□□ 1.43
CLN6-213ENST00000636212 ZNF408Q9H9D4 720 aa23.96■■□□□ 1.43
CLN6-213ENST00000636212 CHRNDQ07001 517 aa23.95■■□□□ 1.42
CLN6-213ENST00000636212 ZNF609O15014 1411 aa23.94■■□□□ 1.42
CLN6-213ENST00000636212 WDR33Q9C0J8 1336 aaKnown RBP23.94■■□□□ 1.42
CLN6-213ENST00000636212 CST9Q5W186 159 aa23.94■■□□□ 1.42
CLN6-213ENST00000636212 USP48Q86UV5 1035 aa23.94■■□□□ 1.42
CLN6-213ENST00000636212 TLL2Q9Y6L7 1015 aa23.94■■□□□ 1.42
CLN6-213ENST00000636212 SCN9AQ15858 1988 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms