RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 YDJCA8MPS7 323 aa23.19■■□□□ 1.3
CLN6-210ENST00000635747 G3V3G9 751 aa23.19■■□□□ 1.3
CLN6-210ENST00000635747 CSF1RP07333 972 aa23.19■■□□□ 1.3
CLN6-210ENST00000635747 ATP2B4P23634 1241 aa23.19■■□□□ 1.3
CLN6-210ENST00000635747 IGHMBP2P38935 993 aaKnown RBP23.19■■□□□ 1.3
CLN6-210ENST00000635747 GMPSP49915 693 aaPredicted RBP23.19■■□□□ 1.3
CLN6-210ENST00000635747 DCAF8Q5TAQ9 597 aa23.19■■□□□ 1.3
CLN6-210ENST00000635747 CREBZFQ9NS37 354 aa23.19■■□□□ 1.3
CLN6-210ENST00000635747 PASKQ96RG2 1323 aa23.18■■□□□ 1.3
CLN6-210ENST00000635747 ALDH1L1O75891 902 aa23.18■■□□□ 1.3
CLN6-210ENST00000635747 CNTROBQ8N137 903 aa23.18■■□□□ 1.3
CLN6-210ENST00000635747 DBNDD1Q9H9R9 158 aa23.18■■□□□ 1.3
CLN6-210ENST00000635747 ECE2O60344 883 aa23.17■■□□□ 1.3
CLN6-210ENST00000635747 ITGBL1O95965 494 aaPredicted RBP23.17■■□□□ 1.3
CLN6-210ENST00000635747 DPF2Q92785 391 aa23.17■■□□□ 1.3
CLN6-210ENST00000635747 COL4A1P02462 1669 aa23.16■■□□□ 1.3
CLN6-210ENST00000635747 ITGA6P23229 1130 aa23.16■■□□□ 1.3
CLN6-210ENST00000635747 SLC4A10Q6U841 1118 aa23.16■■□□□ 1.3
CLN6-210ENST00000635747 MPHOSPH8Q99549 860 aa23.16■■□□□ 1.3
CLN6-210ENST00000635747 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
CLN6-210ENST00000635747 MINPP1Q9UNW1 487 aa23.16■■□□□ 1.3
CLN6-210ENST00000635747 H7C1D1 291 aa23.15■■□□□ 1.3
CLN6-210ENST00000635747 GRM8O00222 908 aa23.15■■□□□ 1.3
CLN6-210ENST00000635747 RPS12P25398 132 aaKnown RBP23.15■■□□□ 1.3
CLN6-210ENST00000635747 DOK7Q18PE1 504 aa23.15■■□□□ 1.3
CLN6-210ENST00000635747 MAP1SQ66K74 1059 aaPredicted RBP23.15■■□□□ 1.3
CLN6-210ENST00000635747 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
CLN6-210ENST00000635747 C9orf78Q9NZ63 289 aaPredicted RBP23.15■■□□□ 1.3
CLN6-210ENST00000635747 PTPRCP08575 1304 aa23.14■■□□□ 1.3
CLN6-210ENST00000635747 MYH3P11055 1940 aa23.14■■□□□ 1.3
CLN6-210ENST00000635747 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
CLN6-210ENST00000635747 PSMD14O00487 310 aa23.14■■□□□ 1.29
CLN6-210ENST00000635747 CT47B1P0C2W7 299 aaPredicted RBP23.14■■□□□ 1.29
CLN6-210ENST00000635747 MRPL50Q8N5N7 158 aaKnown RBP23.14■■□□□ 1.29
CLN6-210ENST00000635747 CNOT7Q9UIV1 285 aaKnown RBP23.14■■□□□ 1.29
CLN6-210ENST00000635747 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.29
CLN6-210ENST00000635747 LTBP1Q14766 1721 aa23.13■■□□□ 1.29
CLN6-210ENST00000635747 TMEM88BA6NKF7 163 aa23.13■■□□□ 1.29
CLN6-210ENST00000635747 FAM161AQ3B820 660 aa23.13■■□□□ 1.29
CLN6-210ENST00000635747 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
CLN6-210ENST00000635747 TRMT2AQ8IZ69 625 aaKnown RBP23.13■■□□□ 1.29
CLN6-210ENST00000635747 ZC3H15Q8WU90 426 aaKnown RBP23.13■■□□□ 1.29
CLN6-210ENST00000635747 GPR101Q96P66 508 aaPredicted RBP23.13■■□□□ 1.29
CLN6-210ENST00000635747 ANKRD2Q9GZV1 360 aa23.13■■□□□ 1.29
CLN6-210ENST00000635747 CCT4P50991 539 aaKnown RBP23.12■■□□□ 1.29
CLN6-210ENST00000635747 IFIT5Q13325 482 aaKnown RBP23.12■■□□□ 1.29
CLN6-210ENST00000635747 CDCA7LQ96GN5 454 aa23.12■■□□□ 1.29
CLN6-210ENST00000635747 LEMD3Q9Y2U8 911 aa23.12■■□□□ 1.29
CLN6-210ENST00000635747 PCNTO95613 3336 aa23.11■■□□□ 1.29
CLN6-210ENST00000635747 VIL1P09327 827 aaKnown RBP23.11■■□□□ 1.29
CLN6-210ENST00000635747 FOXO4P98177 505 aa23.11■■□□□ 1.29
CLN6-210ENST00000635747 PODNQ7Z5L7 613 aa23.11■■□□□ 1.29
CLN6-210ENST00000635747 SSH1Q8WYL5 1049 aa23.11■■□□□ 1.29
CLN6-210ENST00000635747 MICALL2Q8IY33 904 aa23.1■■□□□ 1.29
CLN6-210ENST00000635747 PGAP2Q9UHJ9 254 aa23.1■■□□□ 1.29
CLN6-210ENST00000635747 ZBTB12Q9Y330 459 aaPredicted RBP23.1■■□□□ 1.29
CLN6-210ENST00000635747 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
CLN6-210ENST00000635747 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
CLN6-210ENST00000635747 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
CLN6-210ENST00000635747 MED23Q9ULK4 1368 aa23.09■■□□□ 1.29
CLN6-210ENST00000635747 LMBR1LQ6UX01 489 aa23.08■■□□□ 1.29
CLN6-210ENST00000635747 KCNQ5Q9NR82 932 aa23.08■■□□□ 1.29
CLN6-210ENST00000635747 TAF7LQ5H9L4 462 aa23.06■■□□□ 1.28
CLN6-210ENST00000635747 AGBL3Q8NEM8 1001 aa23.06■■□□□ 1.28
CLN6-210ENST00000635747 COA1Q9GZY4 146 aa23.06■■□□□ 1.28
CLN6-210ENST00000635747 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
CLN6-210ENST00000635747 ZNF804BA4D1E1 1349 aa23.06■■□□□ 1.28
CLN6-210ENST00000635747 UTYO14607 1347 aa23.06■■□□□ 1.28
CLN6-210ENST00000635747 USP17L3A6NCW0 530 aa23.05■■□□□ 1.28
CLN6-210ENST00000635747 USP17L4A6NCW7 530 aa23.05■■□□□ 1.28
CLN6-210ENST00000635747 KCNJ4P48050 445 aa23.05■■□□□ 1.28
CLN6-210ENST00000635747 CHRNDQ07001 517 aa23.05■■□□□ 1.28
CLN6-210ENST00000635747 RSBN1LQ6PCB5 846 aaPredicted RBP23.05■■□□□ 1.28
CLN6-210ENST00000635747 USP17L1Q7RTZ2 530 aa23.05■■□□□ 1.28
CLN6-210ENST00000635747 CNTNAP1P78357 1384 aa23.04■■□□□ 1.28
CLN6-210ENST00000635747 HIRAP54198 1017 aaPredicted RBP23.04■■□□□ 1.28
CLN6-210ENST00000635747 EPHA10Q5JZY3 1008 aa23.04■■□□□ 1.28
CLN6-210ENST00000635747 CDC37L1Q7L3B6 337 aa23.04■■□□□ 1.28
CLN6-210ENST00000635747 TRPM4Q8TD43 1214 aa23.04■■□□□ 1.28
CLN6-210ENST00000635747 MKRN1Q9UHC7 482 aaKnown RBP23.04■■□□□ 1.28
CLN6-210ENST00000635747 ZNF609O15014 1411 aa23.03■■□□□ 1.28
CLN6-210ENST00000635747 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
CLN6-210ENST00000635747 SHTN1A0MZ66 631 aa23.02■■□□□ 1.28
CLN6-210ENST00000635747 WTIPA6NIX2 430 aaPredicted RBP23.02■■□□□ 1.28
CLN6-210ENST00000635747 NBPF7P0C2Y1 421 aaPredicted RBP23.02■■□□□ 1.28
CLN6-210ENST00000635747 BRPF1P55201 1214 aaPredicted RBP23.02■■□□□ 1.28
CLN6-210ENST00000635747 SAMD7Q7Z3H4 446 aa23.02■■□□□ 1.28
CLN6-210ENST00000635747 SUCLG2Q96I99 432 aa23.02■■□□□ 1.28
CLN6-210ENST00000635747 DEFB115Q30KQ5 88 aa23.01■■□□□ 1.27
CLN6-210ENST00000635747 TBC1D10BQ4KMP7 808 aaPredicted RBP23.01■■□□□ 1.27
CLN6-210ENST00000635747 MIER1Q8N108 512 aa23.01■■□□□ 1.27
CLN6-210ENST00000635747 CNNM1Q9NRU3 951 aa23.01■■□□□ 1.27
CLN6-210ENST00000635747 RASSF10A6NK89 507 aa23■■□□□ 1.27
CLN6-210ENST00000635747 TRAF5O00463 557 aa23■■□□□ 1.27
CLN6-210ENST00000635747 MMP14P50281 582 aa23■■□□□ 1.27
CLN6-210ENST00000635747 ZNF280AP59817 542 aaPredicted RBP23■■□□□ 1.27
CLN6-210ENST00000635747 STRIP1Q5VSL9 837 aa23■■□□□ 1.27
CLN6-210ENST00000635747 C15orf52Q6ZUT6 534 aaKnown RBP23■■□□□ 1.27
CLN6-210ENST00000635747 GMLQ99445 158 aa23■■□□□ 1.27
CLN6-210ENST00000635747 ABT1Q9ULW3 272 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms