RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PCCAP05165 728 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-230ENST00000634433 CYP19A1P11511 503 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-230ENST00000634433 ATP5JP18859 108 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 HSPA4P34932 840 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 NUCB2P80303 420 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 TNNI3KQ59H18 835 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 JARID2Q92833 1246 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-230ENST00000634433 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-230ENST00000634433 GBP4Q96PP9 640 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 NAP1L2Q9ULW6 460 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-230ENST00000634433 SUGT1Q9Y2Z0 365 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 FPGT-TNNI3KV9GXZ4 949 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 SPATA31A5Q5VU36 1347 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 SPATA31A7Q8IWB4 1347 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 PEX14O75381 377 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 CIAO1O76071 339 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 MCM4P33991 863 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 NEK4P51957 841 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 TFCP2Q12800 502 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 CWC27Q6UX04 472 aaKnown RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 PLA2G12BQ9BX93 195 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 AK9Q5TCS8 1911 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 ANKRD62A6NC57 917 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 A6NJR5 290 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 ERVV-1B6SEH8 477 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 IL6STP40189 918 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 RAB3GAP1Q15042 981 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 ZBTB38Q8NAP3 1195 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 VTI1AQ96AJ9 217 aa8.6□□□□□ -1.03
BRCA1-230ENST00000634433 LSG1Q9H089 658 aaKnown RBP8.6□□□□□ -1.03
BRCA1-230ENST00000634433 PDE4DQ08499 809 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 GSE1Q14687 1217 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 CCDC57Q2TAC2 916 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 SMARCC1Q92922 1105 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-230ENST00000634433 BOLA2Q9H3K6 86 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 ITGB4P16144 1822 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 EYA2O00167 538 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 FSD1Q9BTV5 496 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 RFX7Q2KHR2 1363 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 CDHR2Q9BYE9 1310 aa8.59□□□□□ -1.03
BRCA1-230ENST00000634433 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
BRCA1-230ENST00000634433 CEP126Q9P2H0 1117 aa8.58□□□□□ -1.04
BRCA1-230ENST00000634433 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
BRCA1-230ENST00000634433 GOLGA6L22H0YM25 854 aa8.58□□□□□ -1.04
BRCA1-230ENST00000634433 MAFGO15525 162 aa8.58□□□□□ -1.04
BRCA1-230ENST00000634433 INTS4Q96HW7 963 aaKnown RBP8.58□□□□□ -1.04
BRCA1-230ENST00000634433 SNRKQ9NRH2 765 aa8.58□□□□□ -1.04
BRCA1-230ENST00000634433 TLR7Q9NYK1 1049 aaKnown RBP8.58□□□□□ -1.04
BRCA1-230ENST00000634433 WNK3Q9BYP7 1800 aa8.58□□□□□ -1.04
BRCA1-230ENST00000634433 CSF1RP07333 972 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 ATG9AQ7Z3C6 839 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 APBB1IPQ7Z5R6 666 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 ANKRD13AQ8IZ07 590 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 TNPO1Q92973 898 aaKnown RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 AK7Q96M32 723 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 HAUS7Q99871 368 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 DBNLQ9UJU6 430 aaKnown RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 PALD1Q9ULE6 856 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 KAT6BQ8WYB5 2073 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 KCNJ4P48050 445 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 IFIT5Q13325 482 aaKnown RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 SKOR2Q2VWA4 1001 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 LRRFIP1Q32MZ4 808 aaKnown RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 RNF20Q5VTR2 975 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 CLEC17AQ6ZS10 378 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 FAM196AQ6ZSG2 479 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 NLRP10Q86W26 655 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.57□□□□□ -1.04
BRCA1-230ENST00000634433 KCNB2Q92953 911 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 TMX3Q96JJ7 454 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 TM6SF1Q9BZW5 370 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 SNX14Q9Y5W7 946 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 CCDC171Q6TFL3 1326 aa8.57□□□□□ -1.04
BRCA1-230ENST00000634433 PSMA5P28066 241 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 NMIQ13287 307 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-230ENST00000634433 CUL4AQ13619 759 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 MARCH10Q8NA82 808 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-230ENST00000634433 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 CAMKK2Q96RR4 588 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 DBNDD2Q9BQY9 259 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 CCDC87Q9NVE4 849 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-230ENST00000634433 ZBTB1Q9Y2K1 713 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-230ENST00000634433 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 PSDA5PKW4 1024 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-230ENST00000634433 TPD52L2O43399 206 aaKnown RBP8.56□□□□□ -1.04
BRCA1-230ENST00000634433 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 MCM6Q14566 821 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms