RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ELP3Q9H9T3 547 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 MSTNO14793 375 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 PDGFAP04085 211 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 COL8A1P27658 744 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 AFF1P51825 1210 aaKnown RBP6.31□□□□□ -1.4
SRP54-214ENST00000630962 NRG1Q02297 640 aaPredicted RBP6.31□□□□□ -1.4
SRP54-214ENST00000630962 PDE3BQ13370 1112 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 KCTD17Q8N5Z5 321 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 NUDT8Q8WV74 236 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 LPIN3Q9BQK8 851 aa6.31□□□□□ -1.4
SRP54-214ENST00000630962 ZBTB42B2RXF5 422 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 NDUFB5O43674 189 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 SMNDC1O75940 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
SRP54-214ENST00000630962 ELNP15502 786 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 PLA2G4EQ3MJ16 856 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 C8orf34Q49A92 452 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 FAM26DQ5JW98 314 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 PERM1Q5SV97 790 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 MSL1Q68DK7 614 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 TXNDC2Q86VQ3 553 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 PLD4Q96BZ4 506 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 SMG9Q9H0W8 520 aaKnown RBP6.3□□□□□ -1.4
SRP54-214ENST00000630962 SUV39H2Q9H5I1 410 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 BRPF3Q9ULD4 1205 aa6.3□□□□□ -1.4
SRP54-214ENST00000630962 C9orf172C9J069 976 aa6.29□□□□□ -1.4
SRP54-214ENST00000630962 KIF4AO95239 1232 aa6.29□□□□□ -1.4
SRP54-214ENST00000630962 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
SRP54-214ENST00000630962 GPAT2Q6NUI2 795 aa6.29□□□□□ -1.4
SRP54-214ENST00000630962 NCAPG2Q86XI2 1143 aa6.29□□□□□ -1.4
SRP54-214ENST00000630962 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
SRP54-214ENST00000630962 NAGPAQ9UK23 515 aa6.29□□□□□ -1.4
SRP54-214ENST00000630962 GNEQ9Y223 722 aaKnown RBP6.29□□□□□ -1.4
SRP54-214ENST00000630962 KRBA1A5PL33 1030 aa6.28□□□□□ -1.4
SRP54-214ENST00000630962 H3BRB1 525 aa6.28□□□□□ -1.4
SRP54-214ENST00000630962 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
SRP54-214ENST00000630962 CES1P23141 567 aa6.28□□□□□ -1.4
SRP54-214ENST00000630962 MLLT1Q03111 559 aaPredicted RBP6.28□□□□□ -1.4
SRP54-214ENST00000630962 ATCAYQ86WG3 371 aa6.28□□□□□ -1.4
SRP54-214ENST00000630962 NSUN5Q96P11 429 aaKnown RBP6.28□□□□□ -1.4
SRP54-214ENST00000630962 TUT1Q9H6E5 874 aaKnown RBP6.28□□□□□ -1.4
SRP54-214ENST00000630962 POLIQ9UNA4 740 aa6.28□□□□□ -1.4
SRP54-214ENST00000630962 A0A0A0MRY4 1105 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 CARNS1A5YM72 827 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 EDN3P14138 238 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 KCNA1Q09470 495 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 ZNF211Q13398 564 aaPredicted RBP6.27□□□□□ -1.41
SRP54-214ENST00000630962 C8orf86Q6ZUL3 223 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 HFE2Q6ZVN8 426 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 GJD3Q8N144 294 aa6.27□□□□□ -1.41
SRP54-214ENST00000630962 J3QW42 95 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 FZD6O60353 706 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 PHACTR2O75167 634 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 MTMR3Q13615 1198 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 FAM117BQ6P1L5 589 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 FBXO11Q86XK2 927 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 DMRTC2Q8IXT2 367 aaPredicted RBP6.26□□□□□ -1.41
SRP54-214ENST00000630962 FMR1NBQ8N0W7 255 aaPredicted RBP6.26□□□□□ -1.41
SRP54-214ENST00000630962 GGNBP2Q9H3C7 697 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 TMEM63CQ9P1W3 806 aa6.26□□□□□ -1.41
SRP54-214ENST00000630962 PTPRAP18433 802 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 SERPINB4P48594 390 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 GRIK5Q16478 980 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 ILDR2Q71H61 639 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 LENG1Q96BZ8 264 aaPredicted RBP6.25□□□□□ -1.41
SRP54-214ENST00000630962 SPOCK3Q9BQ16 436 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 TRAIPQ9BWF2 469 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 PBX4Q9BYU1 374 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 ANO2Q9NQ90 1003 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 SALL4Q9UJQ4 1053 aa6.25□□□□□ -1.41
SRP54-214ENST00000630962 C1QTNF9BB2RNN3 333 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 TNFRSF21O75509 655 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 GATA4P43694 442 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 CABP4P57796 275 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 CEP135Q66GS9 1140 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 GDF6Q6KF10 455 aaPredicted RBP6.24□□□□□ -1.41
SRP54-214ENST00000630962 IGF2-ASQ6U949 168 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 CD163Q86VB7 1156 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 IL22RA1Q8N6P7 574 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 CEP120Q8N960 986 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 DMRTB1Q96MA1 342 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 AMOTL2Q9Y2J4 779 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 PPME1Q9Y570 386 aa6.24□□□□□ -1.41
SRP54-214ENST00000630962 CDC27P30260 824 aa6.23□□□□□ -1.41
SRP54-214ENST00000630962 C1orf127Q8N9H9 656 aa6.23□□□□□ -1.41
SRP54-214ENST00000630962 WNT8BQ93098 351 aa6.23□□□□□ -1.41
SRP54-214ENST00000630962 SOWAHDA6NJG2 315 aa6.22□□□□□ -1.41
SRP54-214ENST00000630962 ARHGAP4P98171 946 aa6.22□□□□□ -1.41
SRP54-214ENST00000630962 ADAM19Q9H013 955 aa6.22□□□□□ -1.41
SRP54-214ENST00000630962 CCDC87Q9NVE4 849 aa6.22□□□□□ -1.41
SRP54-214ENST00000630962 CNTN3Q9P232 1028 aa6.22□□□□□ -1.41
SRP54-214ENST00000630962 USP21Q9UK80 565 aa6.22□□□□□ -1.41
SRP54-214ENST00000630962 PROCP04070 461 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 CHRNA4P43681 627 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 ARL4DP49703 201 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 TMEM102Q8N9M5 508 aaPredicted RBP6.21□□□□□ -1.42
SRP54-214ENST00000630962 KLHL23Q8NBE8 558 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 TMC1Q8TDI8 760 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 FAM129BQ96TA1 746 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 RBCK1Q9BYM8 510 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms