RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 CCDC88AQ3V6T2 1871 aa23.76■■□□□ 1.39
CNOT9-209ENST00000627282 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
CNOT9-209ENST00000627282 RPS8P62241 208 aaKnown RBP23.76■■□□□ 1.39
CNOT9-209ENST00000627282 ANKRD18BA2A2Z9 1011 aa23.75■■□□□ 1.39
CNOT9-209ENST00000627282 PPEF1O14829 653 aaPredicted RBP23.75■■□□□ 1.39
CNOT9-209ENST00000627282 BBOX1O75936 387 aa23.75■■□□□ 1.39
CNOT9-209ENST00000627282 CCDC57Q2TAC2 916 aa23.75■■□□□ 1.39
CNOT9-209ENST00000627282 CDC5LQ99459 802 aaKnown RBP23.75■■□□□ 1.39
CNOT9-209ENST00000627282 SNED1Q8TER0 1413 aa23.75■■□□□ 1.39
CNOT9-209ENST00000627282 RFX5P48382 616 aaPredicted RBP23.74■■□□□ 1.39
CNOT9-209ENST00000627282 FKBP4Q02790 459 aaKnown RBP eCLIP23.74■■□□□ 1.39
CNOT9-209ENST00000627282 CC2D2BQ6DHV5 1058 aa23.74■■□□□ 1.39
CNOT9-209ENST00000627282 HDAC1Q13547 482 aaPredicted RBP23.73■■□□□ 1.39
CNOT9-209ENST00000627282 ANKRD18AQ8IVF6 992 aa23.73■■□□□ 1.39
CNOT9-209ENST00000627282 ZNF594Q96JF6 807 aaPredicted RBP23.73■■□□□ 1.39
CNOT9-209ENST00000627282 PNMA6EA0A0J9YXQ4 647 aa23.73■■□□□ 1.39
CNOT9-209ENST00000627282 PDE4AP27815 886 aa23.73■■□□□ 1.39
CNOT9-209ENST00000627282 C1QTNF8P60827 252 aa23.73■■□□□ 1.39
CNOT9-209ENST00000627282 CEP85Q6P2H3 762 aa23.73■■□□□ 1.39
CNOT9-209ENST00000627282 DICER1Q9UPY3 1922 aaKnown RBP23.72■■□□□ 1.39
CNOT9-209ENST00000627282 SRGAP3O43295 1099 aa23.72■■□□□ 1.39
CNOT9-209ENST00000627282 KLHDC4Q8TBB5 520 aa23.72■■□□□ 1.39
CNOT9-209ENST00000627282 KIF3CO14782 793 aa23.71■■□□□ 1.39
CNOT9-209ENST00000627282 ATP8B2P98198 1209 aa23.71■■□□□ 1.39
CNOT9-209ENST00000627282 BACH2Q9BYV9 841 aa23.71■■□□□ 1.39
CNOT9-209ENST00000627282 NMRK2Q9NPI5 230 aa23.71■■□□□ 1.39
CNOT9-209ENST00000627282 ATP6V0A2Q9Y487 856 aa23.71■■□□□ 1.39
CNOT9-209ENST00000627282 IGHMBP2P38935 993 aaKnown RBP23.7■■□□□ 1.39
CNOT9-209ENST00000627282 PTPN12Q05209 780 aaKnown RBP23.7■■□□□ 1.39
CNOT9-209ENST00000627282 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.39
CNOT9-209ENST00000627282 PSMD1Q99460 953 aa23.7■■□□□ 1.39
CNOT9-209ENST00000627282 ZNF277Q9NRM2 450 aaPredicted RBP23.7■■□□□ 1.39
CNOT9-209ENST00000627282 BSDC1Q9NW68 430 aaPredicted RBP23.7■■□□□ 1.39
CNOT9-209ENST00000627282 SPEF2Q9C093 1822 aa23.7■■□□□ 1.38
CNOT9-209ENST00000627282 TMC4Q7Z404 712 aa23.7■■□□□ 1.38
CNOT9-209ENST00000627282 SP8Q8IXZ3 490 aa23.7■■□□□ 1.38
CNOT9-209ENST00000627282 POLA2Q14181 598 aa23.69■■□□□ 1.38
CNOT9-209ENST00000627282 TAF7LQ5H9L4 462 aa23.69■■□□□ 1.38
CNOT9-209ENST00000627282 SIRT2Q8IXJ6 389 aa23.69■■□□□ 1.38
CNOT9-209ENST00000627282 LRRC37AA6NMS7 1700 aa23.68■■□□□ 1.38
CNOT9-209ENST00000627282 GLTPD2A6NH11 291 aa23.68■■□□□ 1.38
CNOT9-209ENST00000627282 SSH3Q8TE77 659 aa23.68■■□□□ 1.38
CNOT9-209ENST00000627282 MPHOSPH8Q99549 860 aa23.68■■□□□ 1.38
CNOT9-209ENST00000627282 PUS3Q9BZE2 481 aaKnown RBP23.68■■□□□ 1.38
CNOT9-209ENST00000627282 PA2G4Q9UQ80 394 aaKnown RBP23.68■■□□□ 1.38
CNOT9-209ENST00000627282 LDHAL6AQ6ZMR3 332 aa23.67■■□□□ 1.38
CNOT9-209ENST00000627282 RGS3P49796 1198 aa23.66■■□□□ 1.38
CNOT9-209ENST00000627282 RPAP2Q8IXW5 612 aaPredicted RBP23.66■■□□□ 1.38
CNOT9-209ENST00000627282 TMX4Q9H1E5 349 aaPredicted RBP23.66■■□□□ 1.38
CNOT9-209ENST00000627282 COPRSQ9NQ92 184 aa23.66■■□□□ 1.38
CNOT9-209ENST00000627282 MINPP1Q9UNW1 487 aa23.66■■□□□ 1.38
CNOT9-209ENST00000627282 LRRC24Q50LG9 513 aa23.66■■□□□ 1.38
CNOT9-209ENST00000627282 IARSP41252 1262 aaKnown RBP23.65■■□□□ 1.38
CNOT9-209ENST00000627282 DPY19L2Q6NUT2 758 aa23.65■■□□□ 1.38
CNOT9-209ENST00000627282 RIPOR2Q9Y4F9 1068 aa23.65■■□□□ 1.38
CNOT9-209ENST00000627282 SIL1Q9H173 461 aa23.64■■□□□ 1.38
CNOT9-209ENST00000627282 CNNM1Q9NRU3 951 aa23.64■■□□□ 1.38
CNOT9-209ENST00000627282 EYA2O00167 538 aa23.63■■□□□ 1.37
CNOT9-209ENST00000627282 GPSM2P81274 684 aa23.63■■□□□ 1.37
CNOT9-209ENST00000627282 RRAGCQ9HB90 399 aa23.63■■□□□ 1.37
CNOT9-209ENST00000627282 CHRNDQ07001 517 aa23.62■■□□□ 1.37
CNOT9-209ENST00000627282 ATG9AQ7Z3C6 839 aa23.62■■□□□ 1.37
CNOT9-209ENST00000627282 SMC5Q8IY18 1101 aa23.62■■□□□ 1.37
CNOT9-209ENST00000627282 LTBP1Q14766 1721 aa23.62■■□□□ 1.37
CNOT9-209ENST00000627282 MPNDQ8N594 471 aa23.62■■□□□ 1.37
CNOT9-209ENST00000627282 NSFL1CQ9UNZ2 370 aaKnown RBP23.62■■□□□ 1.37
CNOT9-209ENST00000627282 DUOX1Q9NRD9 1551 aa23.62■■□□□ 1.37
CNOT9-209ENST00000627282 TOMM70O94826 608 aa23.61■■□□□ 1.37
CNOT9-209ENST00000627282 RTFDC1Q9BY42 306 aaPredicted RBP23.61■■□□□ 1.37
CNOT9-209ENST00000627282 PODXL2Q9NZ53 605 aa23.61■■□□□ 1.37
CNOT9-209ENST00000627282 FBXO3Q9UK99 471 aa23.61■■□□□ 1.37
CNOT9-209ENST00000627282 CIAO1O76071 339 aa23.6■■□□□ 1.37
CNOT9-209ENST00000627282 DPP8Q6V1X1 898 aaPredicted RBP23.6■■□□□ 1.37
CNOT9-209ENST00000627282 HELBQ8NG08 1087 aaPredicted RBP23.6■■□□□ 1.37
CNOT9-209ENST00000627282 WDR90Q96KV7 1748 aa23.6■■□□□ 1.37
CNOT9-209ENST00000627282 COL4A5P29400 1685 aa23.6■■□□□ 1.37
CNOT9-209ENST00000627282 XDHP47989 1333 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 WTIPA6NIX2 430 aaPredicted RBP23.59■■□□□ 1.37
CNOT9-209ENST00000627282 JDP2Q8WYK2 163 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 ANKIB1Q9P2G1 1089 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
CNOT9-209ENST00000627282 A0A1B0GUL6 1792 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 HMMRO75330 724 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 VEGFAP15692 232 aaPredicted RBP23.59■■□□□ 1.37
CNOT9-209ENST00000627282 ANKRD2Q9GZV1 360 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 POLLQ9UGP5 575 aa23.59■■□□□ 1.37
CNOT9-209ENST00000627282 MROH5Q6ZUA9 1318 aa23.58■■□□□ 1.37
CNOT9-209ENST00000627282 ZNF541Q9H0D2 1346 aa23.58■■□□□ 1.37
CNOT9-209ENST00000627282 FZD9O00144 591 aa23.58■■□□□ 1.36
CNOT9-209ENST00000627282 TAF5LO75529 589 aa23.58■■□□□ 1.36
CNOT9-209ENST00000627282 SURF6O75683 361 aaKnown RBP23.58■■□□□ 1.36
CNOT9-209ENST00000627282 DDNO94850 711 aaPredicted RBP23.58■■□□□ 1.36
CNOT9-209ENST00000627282 C16orf71Q8IYS4 520 aaPredicted RBP23.58■■□□□ 1.36
CNOT9-209ENST00000627282 LARGE2Q8N3Y3 721 aa23.58■■□□□ 1.36
CNOT9-209ENST00000627282 VGLL2Q8N8G2 317 aa23.58■■□□□ 1.36
CNOT9-209ENST00000627282 SUPT20HQ8NEM7 779 aa23.58■■□□□ 1.36
CNOT9-209ENST00000627282 VPS33BQ9H267 617 aa23.58■■□□□ 1.36
CNOT9-209ENST00000627282 SNAP23O00161 211 aa23.57■■□□□ 1.36
CNOT9-209ENST00000627282 METTL24Q5JXM2 366 aa23.57■■□□□ 1.36
CNOT9-209ENST00000627282 TBC1D16Q8TBP0 767 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms