RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
CHD2-207ENST00000626782 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
CHD2-207ENST00000626782 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
CHD2-207ENST00000626782 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
CHD2-207ENST00000626782 AK7Q96M32 723 aa12.48□□□□□ -0.41
CHD2-207ENST00000626782 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
CHD2-207ENST00000626782 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
CHD2-207ENST00000626782 SCARF1Q14162 830 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 USPL1Q5W0Q7 1092 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 NARFQ9UHQ1 456 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 CCDC171Q6TFL3 1326 aa12.47□□□□□ -0.41
CHD2-207ENST00000626782 RTL9Q8NET4 1388 aa12.46□□□□□ -0.41
CHD2-207ENST00000626782 ABCC12Q96J65 1359 aa12.46□□□□□ -0.41
CHD2-207ENST00000626782 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
CHD2-207ENST00000626782 SEC62Q99442 399 aaKnown RBP12.46□□□□□ -0.41
CHD2-207ENST00000626782 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
CHD2-207ENST00000626782 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 GOLIM4O00461 696 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.42
CHD2-207ENST00000626782 METTL24Q5JXM2 366 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 KBTBD3Q8NAB2 608 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 RUFY2Q8WXA3 655 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.42
CHD2-207ENST00000626782 UPF3BQ9BZI7 483 aaKnown RBP12.46□□□□□ -0.42
CHD2-207ENST00000626782 CNNM1Q9NRU3 951 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 PAG1Q9NWQ8 432 aa12.46□□□□□ -0.42
CHD2-207ENST00000626782 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
CHD2-207ENST00000626782 SNAP23O00161 211 aa12.45□□□□□ -0.42
CHD2-207ENST00000626782 NEK4P51957 841 aa12.45□□□□□ -0.42
CHD2-207ENST00000626782 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
CHD2-207ENST00000626782 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
CHD2-207ENST00000626782 PI16Q6UXB8 463 aa12.45□□□□□ -0.42
CHD2-207ENST00000626782 BICDL1Q6ZP65 573 aa12.45□□□□□ -0.42
CHD2-207ENST00000626782 TNS1Q9HBL0 1735 aaKnown RBP12.45□□□□□ -0.42
CHD2-207ENST00000626782 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
CHD2-207ENST00000626782 HIP1O00291 1037 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 RGL2O15211 777 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
CHD2-207ENST00000626782 PDE8BO95263 885 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 IFIT1P09914 478 aaKnown RBP12.44□□□□□ -0.42
CHD2-207ENST00000626782 MCCP23508 829 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
CHD2-207ENST00000626782 MAP4K1Q92918 833 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 AKAP2Q9Y2D5 859 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 RTCBQ9Y3I0 505 aaKnown RBP12.44□□□□□ -0.42
CHD2-207ENST00000626782 TAF6LQ9Y6J9 622 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 FGFR2P21802 821 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 EN1Q05925 392 aaPredicted RBP12.44□□□□□ -0.42
CHD2-207ENST00000626782 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHD2-207ENST00000626782 KCNB2Q92953 911 aa12.44□□□□□ -0.42
CHD2-207ENST00000626782 TAF5LO75529 589 aa12.43□□□□□ -0.42
CHD2-207ENST00000626782 ADCK5Q3MIX3 580 aa12.43□□□□□ -0.42
CHD2-207ENST00000626782 RBM8AQ9Y5S9 174 aaKnown RBP12.43□□□□□ -0.42
CHD2-207ENST00000626782 MYH7P12883 1935 aa12.43□□□□□ -0.42
CHD2-207ENST00000626782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
CHD2-207ENST00000626782 ST18O60284 1047 aa12.43□□□□□ -0.42
CHD2-207ENST00000626782 MCAMP43121 646 aa12.43□□□□□ -0.42
CHD2-207ENST00000626782 EZH2Q15910 746 aaKnown RBP12.43□□□□□ -0.42
CHD2-207ENST00000626782 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
CHD2-207ENST00000626782 PRPF40BQ6NWY9 871 aaKnown RBP12.43□□□□□ -0.42
CHD2-207ENST00000626782 PLSCR1O15162 318 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 DEFB132Q7Z7B7 95 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 TTC14Q96N46 770 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 CHMP5Q9NZZ3 219 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 MROH5Q6ZUA9 1318 aa12.42□□□□□ -0.42
CHD2-207ENST00000626782 CPA1P15085 419 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 ZAP70P43403 619 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
CHD2-207ENST00000626782 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
CHD2-207ENST00000626782 ZPR1O75312 459 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 PHKA1P46020 1223 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHD2-207ENST00000626782 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 CREB3L3Q68CJ9 461 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
CHD2-207ENST00000626782 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
CHD2-207ENST00000626782 SLC27A2O14975 620 aa12.4□□□□□ -0.42
CHD2-207ENST00000626782 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
CHD2-207ENST00000626782 ZMYM1Q5SVZ6 1142 aa12.4□□□□□ -0.42
CHD2-207ENST00000626782 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
CHD2-207ENST00000626782 RPAP1Q9BWH6 1393 aaPredicted RBP12.4□□□□□ -0.42
CHD2-207ENST00000626782 DOCK2Q92608 1830 aa12.4□□□□□ -0.42
CHD2-207ENST00000626782 MCMDC2Q4G0Z9 681 aa12.4□□□□□ -0.43
CHD2-207ENST00000626782 VPS53Q5VIR6 699 aa12.4□□□□□ -0.43
CHD2-207ENST00000626782 CCDC102BQ68D86 513 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms