RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.18
UBE3A-209ENST00000625778 EPC1Q9H2F5 836 aa16.21■□□□□ 0.18
UBE3A-209ENST00000625778 PTPDC1A2A3K4 754 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 GNL2Q13823 731 aaKnown RBP16.2■□□□□ 0.18
UBE3A-209ENST00000625778 MRFAP1L1Q96HT8 127 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
UBE3A-209ENST00000625778 ZNF446Q9NWS9 450 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 ADCY9O60503 1353 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 TAF5LO75529 589 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 SFPQP23246 707 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBE3A-209ENST00000625778 LMOD1P29536 600 aaPredicted RBP16.2■□□□□ 0.18
UBE3A-209ENST00000625778 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
UBE3A-209ENST00000625778 RBM43Q6ZSC3 357 aaKnown RBP16.19■□□□□ 0.18
UBE3A-209ENST00000625778 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 DPCR1Q3MIW9 517 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 DBF4Q9UBU7 674 aaPredicted RBP16.19■□□□□ 0.18
UBE3A-209ENST00000625778 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 GRM8O00222 908 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 NEMFO60524 1076 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 URI1O94763 535 aaPredicted RBP16.19■□□□□ 0.18
UBE3A-209ENST00000625778 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 MNS1Q8NEH6 495 aa16.19■□□□□ 0.18
UBE3A-209ENST00000625778 CYP21A2P08686 494 aa16.18■□□□□ 0.18
UBE3A-209ENST00000625778 KCNB2Q92953 911 aa16.18■□□□□ 0.18
UBE3A-209ENST00000625778 KDRP35968 1356 aa16.18■□□□□ 0.18
UBE3A-209ENST00000625778 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
UBE3A-209ENST00000625778 SEC31AO94979 1220 aaKnown RBP16.18■□□□□ 0.18
UBE3A-209ENST00000625778 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
UBE3A-209ENST00000625778 CLCN6P51797 869 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 STK38Q15208 465 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 NEK11Q8NG66 645 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 PPP1R13BQ96KQ4 1090 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 NEUROD6Q96NK8 337 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 NAT10Q9H0A0 1025 aaKnown RBP16.17■□□□□ 0.18
UBE3A-209ENST00000625778 ZSCAN16Q9H4T2 348 aaPredicted RBP16.17■□□□□ 0.18
UBE3A-209ENST00000625778 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
UBE3A-209ENST00000625778 CDC25BP30305 580 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 NBPF6Q5VWK0 638 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 E4F1Q66K89 784 aaPredicted RBP16.17■□□□□ 0.18
UBE3A-209ENST00000625778 NBPF4Q96M43 638 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 UBXN4Q92575 508 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 GJB4Q9NTQ9 266 aa16.17■□□□□ 0.18
UBE3A-209ENST00000625778 NRDCO43847 1150 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
UBE3A-209ENST00000625778 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 LTKP29376 864 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 HMG20BQ9P0W2 317 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 USP31Q70CQ4 1352 aa16.16■□□□□ 0.18
UBE3A-209ENST00000625778 NEO1Q92859 1461 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 CTAGE5O15320 804 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 NDUFA8P51970 172 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 KRT32Q14532 448 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-209ENST00000625778 APPP05067 770 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 TFCP2Q12800 502 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 NSUN7Q8NE18 718 aaKnown RBP16.15■□□□□ 0.18
UBE3A-209ENST00000625778 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-209ENST00000625778 NPHP4O75161 1426 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-209ENST00000625778 CAVIN2O95810 425 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 STOX1Q6ZVD7 989 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 NBPF11Q86T75 865 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 KAZALD1Q96I82 304 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 MYD88Q99836 296 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 DBNDD2Q9BQY9 259 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 ZCCHC17Q9NP64 241 aaKnown RBP16.15■□□□□ 0.18
UBE3A-209ENST00000625778 PCDHA7Q9UN72 937 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 ERBB3P21860 1342 aa16.15■□□□□ 0.18
UBE3A-209ENST00000625778 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 EPHA10Q5JZY3 1008 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 TMCO3Q6UWJ1 677 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 MRPS27Q92552 414 aaKnown RBP16.14■□□□□ 0.17
UBE3A-209ENST00000625778 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 ATP1A3P13637 1013 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 GSDMDP57764 484 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 HAND2P61296 217 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 CARD6Q9BX69 1037 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 DBNLQ9UJU6 430 aaKnown RBP16.14■□□□□ 0.17
UBE3A-209ENST00000625778 C3P01024 1663 aa16.14■□□□□ 0.17
UBE3A-209ENST00000625778 MARCKSP29966 332 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-209ENST00000625778 PDILTQ8N807 584 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.13■□□□□ 0.177e-9■■■□□ 18.2
UBE3A-209ENST00000625778 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 GOLIM4O00461 696 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 SERPINC1P01008 464 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 ADD1P35611 737 aaKnown RBP16.13■□□□□ 0.17
UBE3A-209ENST00000625778 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-209ENST00000625778 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 RCOR1Q9UKL0 485 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms