RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 PIP4K2BP78356 416 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 CTAGE1Q96RT6 745 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 TRIM34Q9BYJ4 488 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 E9PCH4 1651 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 ANXA1P04083 346 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 KLF18A0A0U1RQI7 1052 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 HOXB7P09629 217 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 KRBA2Q6ZNG9 492 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 NUP88Q99567 741 aaPredicted RBP13.58□□□□□ -0.24
ATRX-214ENST00000624166 CNNM1Q9NRU3 951 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 TUBB2AQ13885 445 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 HDXQ7Z353 690 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 TUBB2BQ9BVA1 445 aa13.58□□□□□ -0.24
ATRX-214ENST00000624166 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
ATRX-214ENST00000624166 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 RAI14Q9P0K7 980 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 SSRP1Q08945 709 aaKnown RBP13.57□□□□□ -0.24
ATRX-214ENST00000624166 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 UBAC1Q9BSL1 405 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 CARD6Q9BX69 1037 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 LSG1Q9H089 658 aaKnown RBP13.57□□□□□ -0.24
ATRX-214ENST00000624166 MADDQ8WXG6 1647 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 CTAGE9A4FU28 777 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 C10orf67Q8IYJ2 551 aa13.57□□□□□ -0.24
ATRX-214ENST00000624166 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
ATRX-214ENST00000624166 A0A087WZG4 1122 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 A0A1B0GVL5 298 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 GOLGA8AA7E2F4 631 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 NR1I2O75469 434 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 METAP2P50579 478 aaKnown RBP eCLIP13.56□□□□□ -0.24
ATRX-214ENST00000624166 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 RSPH14Q9UHP6 348 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 NLRP1Q9C000 1473 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
ATRX-214ENST00000624166 ARHGAP6O43182 974 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
ATRX-214ENST00000624166 CABP4P57796 275 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 FANCCQ00597 558 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 SPA17Q15506 151 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 EYA1Q99502 592 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 VPS18Q9P253 973 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 CKAP4Q07065 602 aaKnown RBP13.56□□□□□ -0.24
ATRX-214ENST00000624166 APOBRQ0VD83 1088 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 USP44Q9H0E7 712 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 PPFIA3O75145 1194 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 ERCC6LQ2NKX8 1250 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 ALG1Q9BT22 464 aa13.56□□□□□ -0.24
ATRX-214ENST00000624166 MYO1BO43795 1136 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 ETF1P62495 437 aaKnown RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 SPAG1Q07617 926 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 GIMAP7Q8NHV1 300 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 CACTINQ8WUQ7 758 aaKnown RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 SHROOM2Q13796 1616 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 ATP8B1O43520 1251 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 EPS15P42566 896 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 PAFAH1B1P43034 410 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 NLRP12P59046 1061 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
ATRX-214ENST00000624166 CPSF1Q10570 1443 aaKnown RBP13.55□□□□□ -0.24
ATRX-214ENST00000624166 MAP3K4Q9Y6R4 1608 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 IDH1O75874 414 aaKnown RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 NRBP1Q9UHY1 535 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 ERLIN2O94905 339 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 TDO2P48775 406 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 NCBP1Q09161 790 aaKnown RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
ATRX-214ENST00000624166 MED14O60244 1454 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 ASXL2Q76L83 1435 aa13.54□□□□□ -0.24
ATRX-214ENST00000624166 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 N4BP3O15049 544 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 PTH1RQ03431 593 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
ATRX-214ENST00000624166 EFCAB8A8MWE9 144 aa13.53□□□□□ -0.24
ATRX-214ENST00000624166 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms