RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
NPHP4-211ENST00000622020 STOX1Q6ZVD7 989 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 TDRD7Q8NHU6 1098 aaKnown RBP18.55■□□□□ 0.56
NPHP4-211ENST00000622020 DDX21Q9NR30 783 aaKnown RBP eCLIP18.55■□□□□ 0.56
NPHP4-211ENST00000622020 GCKRQ14397 625 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 USP28Q96RU2 1077 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 MED23Q9ULK4 1368 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 GCP02774 474 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 ANKRD7Q92527 254 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 CHMP4AQ9BY43 222 aa18.54■□□□□ 0.56
NPHP4-211ENST00000622020 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
NPHP4-211ENST00000622020 THEMISQ8N1K5 641 aaPredicted RBP18.53■□□□□ 0.56
NPHP4-211ENST00000622020 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
NPHP4-211ENST00000622020 FPGT-TNNI3KV9GXZ4 949 aa18.53■□□□□ 0.56
NPHP4-211ENST00000622020 GOLIM4O00461 696 aa18.53■□□□□ 0.56
NPHP4-211ENST00000622020 CTIFO43310 598 aaKnown RBP18.53■□□□□ 0.56
NPHP4-211ENST00000622020 SKILP12757 684 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
NPHP4-211ENST00000622020 CEP135Q66GS9 1140 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 ISM2Q6H9L7 571 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 TIMM10P62072 90 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 LRRC8AQ8IWT6 810 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
NPHP4-211ENST00000622020 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 CFAP45Q9UL16 551 aa18.52■□□□□ 0.56
NPHP4-211ENST00000622020 PTPDC1A2A3K4 754 aa18.52■□□□□ 0.55
NPHP4-211ENST00000622020 BIN1O00499 593 aa18.51■□□□□ 0.55
NPHP4-211ENST00000622020 AMOTQ4VCS5 1084 aa18.51■□□□□ 0.55
NPHP4-211ENST00000622020 A0A1B0GVL5 298 aa18.51■□□□□ 0.55
NPHP4-211ENST00000622020 PTPN12Q05209 780 aaKnown RBP18.51■□□□□ 0.55
NPHP4-211ENST00000622020 IQCB1Q15051 598 aa18.51■□□□□ 0.55
NPHP4-211ENST00000622020 AOPEPQ8N6M6 819 aa18.51■□□□□ 0.55
NPHP4-211ENST00000622020 GJB4Q9NTQ9 266 aa18.51■□□□□ 0.55
NPHP4-211ENST00000622020 SMTNL1A8MU46 457 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 KINO60870 393 aaKnown RBP18.5■□□□□ 0.55
NPHP4-211ENST00000622020 POLR3DP05423 398 aaPredicted RBP18.5■□□□□ 0.55
NPHP4-211ENST00000622020 ZNF790Q6PG37 636 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 CCDC73Q6ZRK6 1079 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 FSIP1Q8NA03 581 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 ZNF609O15014 1411 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 A0A087WZG4 1122 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 CTDNEP1O95476 244 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 MCMDC2Q4G0Z9 681 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 TTLL5Q6EMB2 1281 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 RBM43Q6ZSC3 357 aaKnown RBP18.5■□□□□ 0.55
NPHP4-211ENST00000622020 ANKRD13DQ6ZTN6 518 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 ZNF496Q96IT1 587 aaPredicted RBP18.5■□□□□ 0.55
NPHP4-211ENST00000622020 SDF4Q9BRK5 362 aa18.5■□□□□ 0.55
NPHP4-211ENST00000622020 CCDC69A6NI79 296 aa18.49■□□□□ 0.55
NPHP4-211ENST00000622020 KRT32Q14532 448 aa18.49■□□□□ 0.55
NPHP4-211ENST00000622020 NSUN7Q8NE18 718 aaKnown RBP18.49■□□□□ 0.55
NPHP4-211ENST00000622020 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
NPHP4-211ENST00000622020 HAND2P61296 217 aa18.49■□□□□ 0.55
NPHP4-211ENST00000622020 NLRP2Q9NX02 1062 aa18.49■□□□□ 0.55
NPHP4-211ENST00000622020 ZNF215Q9UL58 517 aaPredicted RBP18.49■□□□□ 0.55
NPHP4-211ENST00000622020 ATP5JP18859 108 aa18.48■□□□□ 0.55
NPHP4-211ENST00000622020 PTPN14Q15678 1187 aa18.48■□□□□ 0.55
NPHP4-211ENST00000622020 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
NPHP4-211ENST00000622020 PTPN21Q16825 1174 aa18.48■□□□□ 0.55
NPHP4-211ENST00000622020 LMBR1LQ6UX01 489 aa18.48■□□□□ 0.55
NPHP4-211ENST00000622020 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
NPHP4-211ENST00000622020 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
NPHP4-211ENST00000622020 ZSCAN16Q9H4T2 348 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-211ENST00000622020 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-211ENST00000622020 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
NPHP4-211ENST00000622020 STX1AQ16623 288 aa18.47■□□□□ 0.55
NPHP4-211ENST00000622020 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
NPHP4-211ENST00000622020 ZNF771Q7L3S4 317 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-211ENST00000622020 SNRKQ9NRH2 765 aa18.47■□□□□ 0.55
NPHP4-211ENST00000622020 CCDC85AQ96PX6 553 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-211ENST00000622020 METTL22Q9BUU2 404 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-211ENST00000622020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.46■□□□□ 0.55
NPHP4-211ENST00000622020 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.55
NPHP4-211ENST00000622020 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
NPHP4-211ENST00000622020 TSGA10IPQ3SY00 556 aa18.46■□□□□ 0.55
NPHP4-211ENST00000622020 DHX32Q7L7V1 743 aaKnown RBP18.46■□□□□ 0.55
NPHP4-211ENST00000622020 CTNNA3Q9UI47 895 aa18.46■□□□□ 0.55
NPHP4-211ENST00000622020 SMC2O95347 1197 aa18.45■□□□□ 0.54
NPHP4-211ENST00000622020 SF3A1Q15459 793 aaKnown RBP18.45■□□□□ 0.54
NPHP4-211ENST00000622020 UTYO14607 1347 aa18.45■□□□□ 0.54
NPHP4-211ENST00000622020 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
NPHP4-211ENST00000622020 PAXBP1Q9Y5B6 917 aa18.45■□□□□ 0.54
NPHP4-211ENST00000622020 CRYBG1Q9Y4K1 1723 aa18.45■□□□□ 0.54
NPHP4-211ENST00000622020 PDIA4P13667 645 aaKnown RBP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 RFX5P48382 616 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 ELF2Q15723 593 aa18.44■□□□□ 0.54
NPHP4-211ENST00000622020 FKBP4Q02790 459 aaKnown RBP eCLIP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 COPRSQ9NQ92 184 aa18.44■□□□□ 0.54
NPHP4-211ENST00000622020 RCOR1Q9UKL0 485 aa18.44■□□□□ 0.54
NPHP4-211ENST00000622020 PCDHA7Q9UN72 937 aa18.44■□□□□ 0.54
NPHP4-211ENST00000622020 PFKFB2O60825 505 aa18.44■□□□□ 0.54
NPHP4-211ENST00000622020 ZRSR1Q15695 479 aaKnown RBP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
NPHP4-211ENST00000622020 ALDH8A1Q9H2A2 487 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-211ENST00000622020 LTN1O94822 1766 aa18.43■□□□□ 0.54
NPHP4-211ENST00000622020 E7EWF7 191 aa18.43■□□□□ 0.54
NPHP4-211ENST00000622020 NDUFA8P51970 172 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms