RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CFAP70Q5T0N1 1121 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 RIC3Q7Z5B4 369 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 COG3Q96JB2 828 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 CD248Q9HCU0 757 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 FANCLQ9NW38 375 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 SPECC1LQ69YQ0 1117 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 LARP1Q6PKG0 1096 aaKnown RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 DACH1Q9UI36 760 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 GSPT2Q8IYD1 628 aaKnown RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 GOLGA8BA8MQT2 603 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 HMGB3O15347 200 aaKnown RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 UBXN1Q04323 297 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 DDX27Q96GQ7 796 aaKnown RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 NCAPGQ9BPX3 1015 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 MAPK8IP1Q9UQF2 711 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 PRDM2Q13029 1718 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 LRRC43Q8N309 656 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 NAPGQ99747 312 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 INTUQ9ULD6 942 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 KIF3BO15066 747 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 ERCC3P19447 782 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 ESYT1Q9BSJ8 1104 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 NEXNQ0ZGT2 675 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 FAM47EQ6ZV65 393 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 EFCAB13Q8IY85 973 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 RRAGBQ5VZM2 374 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 IQCA1Q86XH1 822 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ZBTB10Q96DT7 871 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ERICH2A1L162 156 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 IMMTQ16891 758 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CFAP58Q5T655 872 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CDC37L1Q7L3B6 337 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ARMCX6Q7L4S7 300 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 RAB3IL1Q8TBN0 382 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 MROH2BQ7Z745 1585 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 EVC2Q86UK5 1308 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 NR1I2O75469 434 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 DZIP1Q86YF9 867 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 SKAP2O75563 359 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 PDE1AP54750 535 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 GSDMBQ8TAX9 411 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CTAGE5O15320 804 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ADAM21Q9UKJ8 722 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 RNF40O75150 1001 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 MTIF2P46199 727 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 AK2P54819 239 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 TRMT44Q8IYL2 757 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 C11orf57Q6ZUT1 292 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC50Q8IVM0 306 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 UHMK1Q8TAS1 419 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ZNF711Q9Y462 761 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 PPP1R7Q15435 360 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 LONRF2Q1L5Z9 754 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 MYBL1P10243 752 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 GBP1P32455 592 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 TTC39AQ5SRH9 613 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 EID1Q9Y6B2 187 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 KLHL7Q8IXQ5 586 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 MEIS3Q99687 375 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 A0A1W2PRG0 241 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CCT4P50991 539 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 WHAMMP3Q1A5X7 153 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 GPR161Q8N6U8 529 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 ABCB6Q9NP58 842 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 RRBP1Q9P2E9 1410 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 FAM83GA6ND36 823 aa5.72□□□□□ -1.49
VPS13D-214ENST00000620676 NGDNQ8NEJ9 315 aaKnown RBP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 DDX21Q9NR30 783 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS13D-214ENST00000620676 CETN3O15182 167 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 SULT6B1Q6IMI4 303 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC97Q96F63 343 aaPredicted RBP5.71□□□□□ -1.49
VPS13D-214ENST00000620676 A0A087WUV0 522 aaPredicted RBP5.71□□□□□ -1.49
VPS13D-214ENST00000620676 HOMEZQ8IX15 550 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 TXNDC9O14530 226 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 ERCC5P28715 1186 aaPredicted RBP5.71□□□□□ -1.49
VPS13D-214ENST00000620676 PNOCQ13519 176 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC122Q5T0U0 273 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 DAAM2Q86T65 1068 aa5.71□□□□□ -1.49
VPS13D-214ENST00000620676 MYO1FO00160 1098 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 TRHP20396 242 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-214ENST00000620676 KIAA1524Q8TCG1 905 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 BRF1Q92994 677 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 WIZO95785 1651 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 OPHN1O60890 802 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 COG7P83436 770 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 NCOA5Q9HCD5 579 aaKnown RBP5.71□□□□□ -1.5
VPS13D-214ENST00000620676 RNF123Q5XPI4 1314 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 GSTTP1A0A1W2PQM5 241 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 BAG2O95816 211 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 ALS2CR12Q96Q35 445 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 MMRN2Q9H8L6 949 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 LRRC9Q6ZRR7 1453 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 N4BP1O75113 896 aaKnown RBP5.71□□□□□ -1.5
VPS13D-214ENST00000620676 ARMC3Q5W041 872 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 CACNA2D4Q7Z3S7 1137 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 SPDL1Q96EA4 605 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms