RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 SSH3Q8TE77 659 aa12□□□□□ -0.49
TRIO-224ENST00000620511 CDC5LQ99459 802 aaKnown RBP12□□□□□ -0.49
TRIO-224ENST00000620511 BSDC1Q9NW68 430 aaPredicted RBP12□□□□□ -0.49
TRIO-224ENST00000620511 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
TRIO-224ENST00000620511 HDAC5Q9UQL6 1122 aa12□□□□□ -0.49
TRIO-224ENST00000620511 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
TRIO-224ENST00000620511 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
TRIO-224ENST00000620511 NFKBIEO00221 500 aa11.99□□□□□ -0.49
TRIO-224ENST00000620511 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
TRIO-224ENST00000620511 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
TRIO-224ENST00000620511 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
TRIO-224ENST00000620511 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
TRIO-224ENST00000620511 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
TRIO-224ENST00000620511 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
TRIO-224ENST00000620511 GPR162Q16538 588 aa11.98□□□□□ -0.49
TRIO-224ENST00000620511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.98□□□□□ -0.49
TRIO-224ENST00000620511 GPSM2P81274 684 aa11.97□□□□□ -0.49
TRIO-224ENST00000620511 LDHAL6AQ6ZMR3 332 aa11.97□□□□□ -0.49
TRIO-224ENST00000620511 TMC4Q7Z404 712 aa11.97□□□□□ -0.49
TRIO-224ENST00000620511 SNAP23O00161 211 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
TRIO-224ENST00000620511 CCDC93Q567U6 631 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 RPAP2Q8IXW5 612 aaPredicted RBP11.96□□□□□ -0.49
TRIO-224ENST00000620511 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 RTFDC1Q9BY42 306 aaPredicted RBP11.96□□□□□ -0.49
TRIO-224ENST00000620511 TSHZ2Q9NRE2 1034 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 POLLQ9UGP5 575 aa11.96□□□□□ -0.49
TRIO-224ENST00000620511 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.49
TRIO-224ENST00000620511 COL4A5P29400 1685 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 EYA2O00167 538 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 RASSF7Q02833 373 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 CHRNDQ07001 517 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 HELBQ8NG08 1087 aaPredicted RBP11.96□□□□□ -0.5
TRIO-224ENST00000620511 PSMD1Q99460 953 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 MPHOSPH8Q99549 860 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.5
TRIO-224ENST00000620511 LTBP3Q9NS15 1303 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.5
TRIO-224ENST00000620511 TAF5LO75529 589 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 CIAO1O76071 339 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 SASH1O94885 1247 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 TAF7LQ5H9L4 462 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 SOGA3Q5TF21 947 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 RTKN2Q8IZC4 609 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 TBC1D16Q8TBP0 767 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 SIL1Q9H173 461 aa11.95□□□□□ -0.5
TRIO-224ENST00000620511 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
TRIO-224ENST00000620511 NOP58Q9Y2X3 529 aaKnown RBP11.95□□□□□ -0.5
TRIO-224ENST00000620511 CHD4Q14839 1912 aa11.94□□□□□ -0.5
TRIO-224ENST00000620511 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
TRIO-224ENST00000620511 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRIO-224ENST00000620511 MPNDQ8N594 471 aa11.94□□□□□ -0.5
TRIO-224ENST00000620511 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
TRIO-224ENST00000620511 CNNM1Q9NRU3 951 aa11.94□□□□□ -0.5
TRIO-224ENST00000620511 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
TRIO-224ENST00000620511 XDHP47989 1333 aa11.93□□□□□ -0.5
TRIO-224ENST00000620511 KLRK1P26718 216 aa11.93□□□□□ -0.5
TRIO-224ENST00000620511 AAMPQ13685 434 aa11.93□□□□□ -0.5
TRIO-224ENST00000620511 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
TRIO-224ENST00000620511 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
TRIO-224ENST00000620511 TAOK3Q9H2K8 898 aa11.93□□□□□ -0.5
TRIO-224ENST00000620511 SCN9AQ15858 1988 aa11.92□□□□□ -0.5
TRIO-224ENST00000620511 FGFR2P21802 821 aa11.92□□□□□ -0.5
TRIO-224ENST00000620511 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
TRIO-224ENST00000620511 ZNF277Q9NRM2 450 aaPredicted RBP11.92□□□□□ -0.5
TRIO-224ENST00000620511 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
TRIO-224ENST00000620511 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
TRIO-224ENST00000620511 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
TRIO-224ENST00000620511 PDE8BO95263 885 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 IGHDP01880 384 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 IL15P40933 162 aaPredicted RBP11.91□□□□□ -0.5
TRIO-224ENST00000620511 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 EXOC6BQ9Y2D4 811 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
TRIO-224ENST00000620511 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 UFL1O94874 794 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 KIAA2012Q0VF49 1180 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 TFCP2Q12800 502 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
TRIO-224ENST00000620511 METTL24Q5JXM2 366 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 DCTPP1Q9H773 170 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
TRIO-224ENST00000620511 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
TRIO-224ENST00000620511 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
TRIO-224ENST00000620511 LMNB1P20700 586 aa11.9□□□□□ -0.5
TRIO-224ENST00000620511 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.5
TRIO-224ENST00000620511 AOC3Q16853 763 aa11.9□□□□□ -0.5
TRIO-224ENST00000620511 C15orf52Q6ZUT6 534 aaKnown RBP11.9□□□□□ -0.5
TRIO-224ENST00000620511 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
TRIO-224ENST00000620511 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
TRIO-224ENST00000620511 HMMRO75330 724 aa11.89□□□□□ -0.51
TRIO-224ENST00000620511 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIO-224ENST00000620511 UBE4AQ14139 1066 aa11.89□□□□□ -0.51
TRIO-224ENST00000620511 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms