RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 FAM227BQ96M60 508 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 PDE11AQ9HCR9 933 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 CREB3L3Q68CJ9 461 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 DDX17Q92841 729 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 SRLQ86TD4 932 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 TEX2Q8IWB9 1127 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 GOLGA5Q8TBA6 731 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 KIAA1210Q9ULL0 1709 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.59
TNFAIP3-210ENST00000620204 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 IQCB1Q15051 598 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 JAKMIP3Q5VZ66 844 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 MYCBPQ99417 103 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 SASH3O75995 380 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 CAVIN2O95810 425 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 POLR3DP05423 398 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 IL13P35225 146 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 PPP2R3AQ06190 1150 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 STK38Q15208 465 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 CTR9Q6PD62 1173 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 DHX37Q8IY37 1157 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 CCDC150Q8NCX0 1101 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 FBXO18Q8NFZ0 1043 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 ORAI2Q96SN7 254 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 ATF3P18847 181 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 ACTN2P35609 894 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 FOXR1Q6PIV2 292 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 AACSQ86V21 672 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
TNFAIP3-210ENST00000620204 GLRX3O76003 335 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 ANXA1P04083 346 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 TPM1P09493 284 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 PARD6BQ9BYG5 372 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 TOP1P11387 765 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 UBASH3AP57075 661 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 LRRFIP1Q32MZ4 808 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 ARMCX5Q6P1M9 558 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 CPLX3Q8WVH0 158 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
TNFAIP3-210ENST00000620204 CTAGE5O15320 804 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 DPCR1Q3MIW9 517 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 C9orf78Q9NZ63 289 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 CHL1O00533 1208 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 LZTFL1Q9NQ48 299 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 ELP1O95163 1332 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 H0YHG0 523 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 CCP110O43303 1012 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 TBC1D8O95759 1140 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 IVLP07476 585 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 CDC25BP30305 580 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 GDAP1L1Q96MZ0 367 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 DESI2Q9BSY9 194 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
TNFAIP3-210ENST00000620204 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 EIF3CLB5ME19 914 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 SLC3A2P08195 630 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 TEFQ10587 303 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 EIF3CQ99613 913 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 EFCAB8A8MWE9 144 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 EIF3JO75822 258 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 ATP1A3P13637 1013 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 ST3GAL1Q11201 340 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 USP28Q96RU2 1077 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 STAP2Q9UGK3 403 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 TAF7Q15545 349 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 SUGCTQ9HAC7 445 aa11.3□□□□□ -0.6
TNFAIP3-210ENST00000620204 ZC3H6P61129 1189 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms