RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 VEZTQ9HBM0 779 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 B4DLN1 442 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 MRPL12P52815 198 aaKnown RBP23.13■■□□□ 1.29
FGFR1-241ENST00000619564 NBPF14Q5TI25 921 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 PRPF4BQ13523 1007 aaKnown RBP23.13■■□□□ 1.29
FGFR1-241ENST00000619564 PAG1Q9NWQ8 432 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 SHTN1A0MZ66 631 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 GOLGA6L9A6NEM1 432 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 ISM2Q6H9L7 571 aa23.13■■□□□ 1.29
FGFR1-241ENST00000619564 MRPL50Q8N5N7 158 aaKnown RBP23.13■■□□□ 1.29
FGFR1-241ENST00000619564 IGHDP01880 384 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
FGFR1-241ENST00000619564 COMMD10Q9Y6G5 202 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 N4BP3O15049 544 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 MMRN2Q9H8L6 949 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 TRMT1Q9NXH9 659 aaKnown RBP23.12■■□□□ 1.29
FGFR1-241ENST00000619564 RRAGBQ5VZM2 374 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 NECAB1Q8N987 351 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 C8orf58Q8NAV2 365 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 KCNG4Q8TDN1 519 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 TBC1D5Q92609 795 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 DCAF5Q96JK2 942 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 EYA3Q99504 573 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 LRRC2Q9BYS8 371 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 IRS4O14654 1257 aaPredicted RBP23.12■■□□□ 1.29
FGFR1-241ENST00000619564 CALM1P0DP23 149 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 CALM2P0DP24 149 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 CALM3P0DP25 149 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 ANKRD2Q9GZV1 360 aa23.12■■□□□ 1.29
FGFR1-241ENST00000619564 ZSCAN22P10073 491 aaPredicted RBP23.11■■□□□ 1.29
FGFR1-241ENST00000619564 IFI16Q16666 785 aaKnown RBP23.11■■□□□ 1.29
FGFR1-241ENST00000619564 RBM27Q9P2N5 1060 aaKnown RBP23.11■■□□□ 1.29
FGFR1-241ENST00000619564 NSFL1CQ9UNZ2 370 aaKnown RBP23.11■■□□□ 1.29
FGFR1-241ENST00000619564 HLTFQ14527 1009 aaKnown RBP eCLIP23.11■■□□□ 1.29
FGFR1-241ENST00000619564 VTI1AQ96AJ9 217 aa23.11■■□□□ 1.29
FGFR1-241ENST00000619564 KRT13P13646 458 aa23.11■■□□□ 1.29
FGFR1-241ENST00000619564 TMX3Q96JJ7 454 aa23.11■■□□□ 1.29
FGFR1-241ENST00000619564 C6orf50Q9HD87 102 aa23.11■■□□□ 1.29
FGFR1-241ENST00000619564 STAMBPO95630 424 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 ACTN2P35609 894 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 SMC1AQ14683 1233 aaKnown RBP23.1■■□□□ 1.29
FGFR1-241ENST00000619564 SPECC1Q5M775 1068 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 INCENPQ9NQS7 918 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 NUP160Q12769 1436 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 ESYT1Q9BSJ8 1104 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 RTL9Q8NET4 1388 aa23.1■■□□□ 1.29
FGFR1-241ENST00000619564 TMX1Q9H3N1 280 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 GRM1Q13255 1194 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 Q6ZUG5 572 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 PCDH11XQ9BZA7 1347 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 PCDH11YQ9BZA8 1340 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 POTEB2H3BUK9 544 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 RAPGEF6Q8TEU7 1601 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 PHACTR2O75167 634 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 SPAG5Q96R06 1193 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 SYNCQ9H7C4 482 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 AFMP43652 599 aa23.09■■□□□ 1.29
FGFR1-241ENST00000619564 BCCIPQ9P287 314 aaKnown RBP eCLIP23.08■■□□□ 1.29
FGFR1-241ENST00000619564 POLKQ9UBT6 870 aa23.08■■□□□ 1.29
FGFR1-241ENST00000619564 GOLGA6L10A0A0M3HER8 536 aa23.08■■□□□ 1.29
FGFR1-241ENST00000619564 AKR1B10O60218 316 aa23.08■■□□□ 1.28
FGFR1-241ENST00000619564 EHBP1Q8NDI1 1231 aa23.08■■□□□ 1.28
FGFR1-241ENST00000619564 RRP36Q96EU6 259 aaKnown RBP23.08■■□□□ 1.28
FGFR1-241ENST00000619564 TBC1D32Q96NH3 1257 aa23.08■■□□□ 1.28
FGFR1-241ENST00000619564 MCM9Q9NXL9 1143 aa23.08■■□□□ 1.28
FGFR1-241ENST00000619564 SPDYE3A6NKU9 549 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 TTC41PQ6P2S7 1318 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 RNF113AO15541 343 aaKnown RBP23.07■■□□□ 1.28
FGFR1-241ENST00000619564 DHX37Q8IY37 1157 aaKnown RBP23.07■■□□□ 1.28
FGFR1-241ENST00000619564 CTAGE1Q96RT6 745 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 PA2G4Q9UQ80 394 aaKnown RBP23.07■■□□□ 1.28
FGFR1-241ENST00000619564 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 GCP02774 474 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 CALML3P27482 149 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 PLS1Q14651 629 aa23.07■■□□□ 1.28
FGFR1-241ENST00000619564 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.07■■□□□ 1.282e-6■■■□□ 15.2
FGFR1-241ENST00000619564 ADCY5O95622 1261 aa23.06■■□□□ 1.28
FGFR1-241ENST00000619564 NMIQ13287 307 aaPredicted RBP23.06■■□□□ 1.28
FGFR1-241ENST00000619564 RBM26Q5T8P6 1007 aaKnown RBP23.06■■□□□ 1.28
FGFR1-241ENST00000619564 TCEANC2Q96MN5 208 aa23.06■■□□□ 1.28
FGFR1-241ENST00000619564 ZRANB1Q9UGI0 708 aa23.06■■□□□ 1.28
FGFR1-241ENST00000619564 NPATQ14207 1427 aa23.06■■□□□ 1.28
FGFR1-241ENST00000619564 PLVAPQ9BX97 442 aa23.06■■□□□ 1.28
FGFR1-241ENST00000619564 LDHBP07195 334 aaKnown RBP23.06■■□□□ 1.28
FGFR1-241ENST00000619564 CA8P35219 290 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 SPAG1Q07617 926 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 PABPN1LA6NDY0 278 aaKnown RBP23.05■■□□□ 1.28
FGFR1-241ENST00000619564 C16orf45Q96MC5 204 aaPredicted RBP23.05■■□□□ 1.28
FGFR1-241ENST00000619564 ATP10BO94823 1461 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 UVSSAQ2YD98 709 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 JADE2Q9NQC1 790 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 MAGEB6Q8N7X4 407 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 MRPS27Q92552 414 aaKnown RBP23.05■■□□□ 1.28
FGFR1-241ENST00000619564 RIMBP2O15034 1052 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 ASIC1P78348 528 aa23.05■■□□□ 1.28
FGFR1-241ENST00000619564 TRPM2O94759 1503 aa23.04■■□□□ 1.28
FGFR1-241ENST00000619564 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 370.7 ms