RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 CHD1O14646 1710 aa8.23□□□□□ -1.09
HMGN2-210ENST00000619352 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
HMGN2-210ENST00000619352 LGR5O75473 907 aa8.22□□□□□ -1.09
HMGN2-210ENST00000619352 MAPK1P28482 360 aa8.22□□□□□ -1.09
HMGN2-210ENST00000619352 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGN2-210ENST00000619352 SF3B2Q13435 895 aaKnown RBP8.22□□□□□ -1.09
HMGN2-210ENST00000619352 FKBP5Q13451 457 aaPredicted RBP8.22□□□□□ -1.09
HMGN2-210ENST00000619352 C8orf86Q6ZUL3 223 aa8.22□□□□□ -1.09
HMGN2-210ENST00000619352 TSEN2Q8NCE0 465 aaKnown RBP8.22□□□□□ -1.09
HMGN2-210ENST00000619352 PTCD1O75127 700 aaKnown RBP8.21□□□□□ -1.1
HMGN2-210ENST00000619352 NCLP19338 710 aaKnown RBP8.21□□□□□ -1.1
HMGN2-210ENST00000619352 ARHGAP4P98171 946 aa8.21□□□□□ -1.1
HMGN2-210ENST00000619352 C20orf204Q6ZNR8 217 aa8.21□□□□□ -1.1
HMGN2-210ENST00000619352 TP53INP1Q96A56 240 aa8.21□□□□□ -1.1
HMGN2-210ENST00000619352 COL26A1Q96A83 441 aa8.21□□□□□ -1.1
HMGN2-210ENST00000619352 MKNK1Q9BUB5 465 aa8.21□□□□□ -1.1
HMGN2-210ENST00000619352 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
HMGN2-210ENST00000619352 FZD5Q13467 585 aa8.2□□□□□ -1.1
HMGN2-210ENST00000619352 TSNAXIP1Q2TAA8 658 aa8.2□□□□□ -1.1
HMGN2-210ENST00000619352 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
HMGN2-210ENST00000619352 CAPN12Q6ZSI9 719 aa8.2□□□□□ -1.1
HMGN2-210ENST00000619352 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
HMGN2-210ENST00000619352 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
HMGN2-210ENST00000619352 MTMR3Q13615 1198 aa8.19□□□□□ -1.1
HMGN2-210ENST00000619352 EAPPQ56P03 285 aaPredicted RBP8.19□□□□□ -1.1
HMGN2-210ENST00000619352 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
HMGN2-210ENST00000619352 ARHGEF11O15085 1522 aa8.19□□□□□ -1.1
HMGN2-210ENST00000619352 TARBP1Q13395 1621 aaKnown RBP8.18□□□□□ -1.1
HMGN2-210ENST00000619352 SCAMP3O14828 347 aaKnown RBP8.18□□□□□ -1.1
HMGN2-210ENST00000619352 MTFR1Q15390 333 aa8.18□□□□□ -1.1
HMGN2-210ENST00000619352 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
HMGN2-210ENST00000619352 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.15e-13■■□□□ 12.3
HMGN2-210ENST00000619352 ZNF358Q9NW07 568 aa8.18□□□□□ -1.1
HMGN2-210ENST00000619352 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
HMGN2-210ENST00000619352 PPP1R1BQ9UD71 204 aaPredicted RBP8.18□□□□□ -1.1
HMGN2-210ENST00000619352 SERTAD1Q9UHV2 236 aa8.18□□□□□ -1.1
HMGN2-210ENST00000619352 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
HMGN2-210ENST00000619352 A0A0A0MRY4 1105 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 FOXO3O43524 673 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 IGFBP4P22692 258 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 ADH7P40394 386 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 MRPL58Q14197 206 aaKnown RBP8.17□□□□□ -1.1
HMGN2-210ENST00000619352 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 SLC51AQ86UW1 340 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 HELQQ8TDG4 1101 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 CHMP4AQ9BY43 222 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 BACH2Q9BYV9 841 aa8.17□□□□□ -1.1
HMGN2-210ENST00000619352 A6NJY4 79 aa8.16□□□□□ -1.1
HMGN2-210ENST00000619352 TMEM229AB2RXF0 380 aa8.16□□□□□ -1.1
HMGN2-210ENST00000619352 CDK2AP1O14519 115 aa8.16□□□□□ -1.1
HMGN2-210ENST00000619352 NPR3P17342 541 aa8.16□□□□□ -1.1
HMGN2-210ENST00000619352 SLC30A3Q99726 388 aa8.16□□□□□ -1.1
HMGN2-210ENST00000619352 ANKRD13AQ8IZ07 590 aa8.15□□□□□ -1.1
HMGN2-210ENST00000619352 SLC4A9Q96Q91 983 aa8.15□□□□□ -1.1
HMGN2-210ENST00000619352 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
HMGN2-210ENST00000619352 TXLNAP40222 546 aa8.14□□□□□ -1.11
HMGN2-210ENST00000619352 NAA30Q147X3 362 aaPredicted RBP8.14□□□□□ -1.11
HMGN2-210ENST00000619352 ILDR2Q71H61 639 aa8.14□□□□□ -1.11
HMGN2-210ENST00000619352 GAS2L2Q8NHY3 880 aa8.14□□□□□ -1.11
HMGN2-210ENST00000619352 RBCK1Q9BYM8 510 aa8.14□□□□□ -1.11
HMGN2-210ENST00000619352 KRTAP4-2Q9BYR5 136 aa8.14□□□□□ -1.11
HMGN2-210ENST00000619352 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
HMGN2-210ENST00000619352 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
HMGN2-210ENST00000619352 LILRB5O75023 590 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 FAM13AO94988 1023 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 ITGAEP38570 1179 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 RAC1P63000 192 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 HDLBPQ00341 1268 aaKnown RBP8.13□□□□□ -1.11
HMGN2-210ENST00000619352 LRRC69Q6ZNQ3 347 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 PCMTD2Q9NV79 361 aa8.13□□□□□ -1.11
HMGN2-210ENST00000619352 WDR97A6NE52 1622 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 BACH1O14867 736 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 IRAK1P51617 712 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 EPHA4P54764 986 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 FGD1P98174 961 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 SPEM2Q0P670 501 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
HMGN2-210ENST00000619352 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
HMGN2-210ENST00000619352 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
HMGN2-210ENST00000619352 SCG3Q8WXD2 468 aaKnown RBP8.12□□□□□ -1.11
HMGN2-210ENST00000619352 AQRO60306 1485 aaKnown RBP eCLIP8.12□□□□□ -1.119e-13■■■■□ 25.4
HMGN2-210ENST00000619352 NEUROD1Q13562 356 aa8.11□□□□□ -1.11
HMGN2-210ENST00000619352 DPH6Q7L8W6 267 aa8.11□□□□□ -1.11
HMGN2-210ENST00000619352 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
HMGN2-210ENST00000619352 TNS4Q8IZW8 715 aa8.11□□□□□ -1.11
HMGN2-210ENST00000619352 P4HBP07237 508 aaKnown RBP8.1□□□□□ -1.11
HMGN2-210ENST00000619352 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
HMGN2-210ENST00000619352 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
HMGN2-210ENST00000619352 ZDHHC1Q8WTX9 485 aa8.1□□□□□ -1.11
HMGN2-210ENST00000619352 ARAP1Q96P48 1450 aa8.1□□□□□ -1.11
HMGN2-210ENST00000619352 PBRM1Q86U86 1689 aa8.1□□□□□ -1.11
HMGN2-210ENST00000619352 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
HMGN2-210ENST00000619352 RAD54L2Q9Y4B4 1467 aa8.09□□□□□ -1.11
HMGN2-210ENST00000619352 ANKRD62A6NC57 917 aa8.09□□□□□ -1.11
HMGN2-210ENST00000619352 EML1O00423 815 aa8.09□□□□□ -1.11
HMGN2-210ENST00000619352 MPSTP25325 297 aa8.09□□□□□ -1.11
HMGN2-210ENST00000619352 CD97P48960 835 aa8.09□□□□□ -1.11
HMGN2-210ENST00000619352 RAD51AP2Q09MP3 1159 aa8.09□□□□□ -1.11
HMGN2-210ENST00000619352 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms