RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 N4BP2Q86UW6 1770 aaPredicted RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 EXOC6Q8TAG9 804 aa5.75□□□□□ -1.49
SYCP1-210ENST00000618516 CHMP4AQ9BY43 222 aa5.75□□□□□ -1.49
SYCP1-210ENST00000618516 POLLQ9UGP5 575 aa5.75□□□□□ -1.49
SYCP1-210ENST00000618516 RREB1Q92766 1687 aa5.75□□□□□ -1.49
SYCP1-210ENST00000618516 SMARCA5O60264 1052 aaPredicted RBP5.75□□□□□ -1.49
SYCP1-210ENST00000618516 GRAPQ13588 217 aa5.75□□□□□ -1.49
SYCP1-210ENST00000618516 KIAA0825Q8IV33 1275 aa5.75□□□□□ -1.49
SYCP1-210ENST00000618516 GRAPLQ8TC17 118 aaPredicted RBP5.75□□□□□ -1.49
SYCP1-210ENST00000618516 CDC5LQ99459 802 aaKnown RBP5.75□□□□□ -1.49
SYCP1-210ENST00000618516 SCNN1DP51172 638 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 CHRNDQ07001 517 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 C16orf71Q8IYS4 520 aaPredicted RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 KAZALD1Q96I82 304 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 CCDC8Q9H0W5 538 aaPredicted RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 ABCF2Q9UG63 623 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 GTF2IP78347 998 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 TBC1D10BQ4KMP7 808 aaPredicted RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 PI16Q6UXB8 463 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 SAMD7Q7Z3H4 446 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 NIM1KQ8IY84 436 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 GGA1Q9UJY5 639 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 PAPPAQ13219 1627 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 H7C1W4 665 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 MAP4K4O95819 1239 aaPredicted RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 GNAI2P04899 355 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 BCAMP50895 628 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 CCT4P50991 539 aaKnown RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 ALDH1L2Q3SY69 923 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 TRMT2AQ8IZ69 625 aaKnown RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 MINPP1Q9UNW1 487 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 FZD1Q9UP38 647 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 LAMA2P24043 3122 aaKnown RBP5.74□□□□□ -1.49
SYCP1-210ENST00000618516 PTPRCP08575 1304 aa5.74□□□□□ -1.49
SYCP1-210ENST00000618516 C4AP0C0L4 1744 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 LMNB1P20700 586 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 FOXO4P98177 505 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 MAP1SQ66K74 1059 aaPredicted RBP5.73□□□□□ -1.49
SYCP1-210ENST00000618516 DPY19L2Q6NUT2 758 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 STK11IPQ8N1F8 1099 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.73□□□□□ -1.49
SYCP1-210ENST00000618516 CHMP4CQ96CF2 233 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 ZNF541Q9H0D2 1346 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 LRP5O75197 1615 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 EGFRP00533 1210 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 IARSP41252 1262 aaKnown RBP5.73□□□□□ -1.49
SYCP1-210ENST00000618516 EPS15P42566 896 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 RRP1P56182 461 aaKnown RBP5.73□□□□□ -1.49
SYCP1-210ENST00000618516 ATP6V0A2Q9Y487 856 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 PCDHAC2Q9Y5I4 1007 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 C10orf71Q711Q0 1435 aa5.73□□□□□ -1.49
SYCP1-210ENST00000618516 ADORA1P30542 326 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 CACNB3P54284 484 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 EIF6P56537 245 aaKnown RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 TFCP2Q12800 502 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 G3BP1Q13283 466 aaKnown RBP eCLIP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 TBC1D9Q6ZT07 1266 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 TBC1D16Q8TBP0 767 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 ATP10DQ9P241 1426 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 KDM3BQ7LBC6 1761 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 ECE2O60344 883 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 FKBP4Q02790 459 aaKnown RBP eCLIP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 MKRN3Q13064 507 aaKnown RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 STYK1Q6J9G0 422 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 CEP126Q9P2H0 1117 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 CACNA1SQ13698 1873 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 SIPA1L3O60292 1781 aaPredicted RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 ASTN2O75129 1339 aaPredicted RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 CLRN2A0PK11 232 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 ALDH1L1O75891 902 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 BBOX1O75936 387 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 SASH1O94885 1247 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 GNAI3P08754 354 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 CXCL9Q07325 125 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 MVPQ14764 893 aaKnown RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 CRY2Q49AN0 593 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 ANKRD44Q8N8A2 993 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 DNAJC2Q99543 621 aaKnown RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 VEZTQ9HBM0 779 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 ZBTB47Q9UFB7 747 aaPredicted RBP5.72□□□□□ -1.49
SYCP1-210ENST00000618516 NUP98P52948 1817 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 SLX4Q8IY92 1834 aa5.72□□□□□ -1.49
SYCP1-210ENST00000618516 COL5A3P25940 1745 aaPredicted RBP5.71□□□□□ -1.49
SYCP1-210ENST00000618516 PLEKHG2Q9H7P9 1386 aa5.71□□□□□ -1.49
SYCP1-210ENST00000618516 ZNF804BA4D1E1 1349 aa5.71□□□□□ -1.49
SYCP1-210ENST00000618516 PSMD14O00487 310 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 NEFLP07196 543 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 TTLL5Q6EMB2 1281 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 RTKN2Q8IZC4 609 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 EDC3Q96F86 508 aaKnown RBP5.71□□□□□ -1.5
SYCP1-210ENST00000618516 TLR7Q9NYK1 1049 aaKnown RBP5.71□□□□□ -1.5
SYCP1-210ENST00000618516 UBR2Q8IWV8 1755 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 GMPSP49915 693 aaPredicted RBP5.71□□□□□ -1.5
SYCP1-210ENST00000618516 CASP7P55210 303 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 TRIM28Q13263 835 aaKnown RBP5.71□□□□□ -1.5
SYCP1-210ENST00000618516 SF3B3Q15393 1217 aaKnown RBP5.71□□□□□ -1.5
SYCP1-210ENST00000618516 SLFNL1Q499Z3 407 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 COL4A1P02462 1669 aa5.71□□□□□ -1.5
SYCP1-210ENST00000618516 YDJCA8MPS7 323 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms