RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TNRC6CQ9HCJ0 1690 aaKnown RBP9.31□□□□□ -0.92
VPS45-213ENST00000618148 KLRG2A4D1S0 409 aaPredicted RBP9.3□□□□□ -0.92
VPS45-213ENST00000618148 SF3B3Q15393 1217 aaKnown RBP9.3□□□□□ -0.92
VPS45-213ENST00000618148 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
VPS45-213ENST00000618148 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
VPS45-213ENST00000618148 PRR5LQ6MZQ0 368 aa9.3□□□□□ -0.92
VPS45-213ENST00000618148 BICDL1Q6ZP65 573 aa9.3□□□□□ -0.92
VPS45-213ENST00000618148 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
VPS45-213ENST00000618148 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
VPS45-213ENST00000618148 SERPINB2P05120 415 aa9.29□□□□□ -0.92
VPS45-213ENST00000618148 MMP10P09238 476 aa9.29□□□□□ -0.92
VPS45-213ENST00000618148 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
VPS45-213ENST00000618148 PTPN12Q05209 780 aaKnown RBP9.29□□□□□ -0.92
VPS45-213ENST00000618148 CRY2Q49AN0 593 aa9.29□□□□□ -0.92
VPS45-213ENST00000618148 PDGFDQ9GZP0 370 aaPredicted RBP9.29□□□□□ -0.92
VPS45-213ENST00000618148 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
VPS45-213ENST00000618148 NUCB1Q02818 461 aa9.29□□□□□ -0.92
VPS45-213ENST00000618148 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
VPS45-213ENST00000618148 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 RAB11FIP3O75154 756 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 CIAO1O76071 339 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 CCDC152Q4G0S7 254 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 HSP90AB4PQ58FF6 505 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 GREM2Q9H772 168 aa9.28□□□□□ -0.92
VPS45-213ENST00000618148 ST5P78524 1137 aa9.27□□□□□ -0.93
VPS45-213ENST00000618148 IFIT5Q13325 482 aaKnown RBP9.27□□□□□ -0.93
VPS45-213ENST00000618148 NLRP3Q96P20 1036 aa9.27□□□□□ -0.93
VPS45-213ENST00000618148 BRIP1Q9BX63 1249 aa9.27□□□□□ -0.93
VPS45-213ENST00000618148 C10orf71Q711Q0 1435 aa9.27□□□□□ -0.93
VPS45-213ENST00000618148 COL4A1P02462 1669 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 SURF6O75683 361 aaKnown RBP9.26□□□□□ -0.93
VPS45-213ENST00000618148 ITGA6P23229 1130 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
VPS45-213ENST00000618148 HOXA10P31260 410 aaPredicted RBP9.26□□□□□ -0.93
VPS45-213ENST00000618148 CCDC57Q2TAC2 916 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 ATG9AQ7Z3C6 839 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 ERC1Q8IUD2 1116 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 MTFR1LQ9H019 292 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 PA2G4Q9UQ80 394 aaKnown RBP9.26□□□□□ -0.93
VPS45-213ENST00000618148 EXOC6BQ9Y2D4 811 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 PARP3Q9Y6F1 533 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 KIF13BQ9NQT8 1826 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 ANKRD18BA2A2Z9 1011 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 R3HDM1Q15032 1099 aaKnown RBP9.26□□□□□ -0.93
VPS45-213ENST00000618148 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 KIF1BPQ96EK5 621 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 PDZRN3Q9UPQ7 1066 aa9.26□□□□□ -0.93
VPS45-213ENST00000618148 EYA2O00167 538 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 SASH1O94885 1247 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 IL15P40933 162 aaPredicted RBP9.25□□□□□ -0.93
VPS45-213ENST00000618148 EMP3P54852 163 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 RHPN1Q8TCX5 695 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 LRRCC1Q9C099 1032 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 RIPOR2Q9Y4F9 1068 aa9.25□□□□□ -0.93
VPS45-213ENST00000618148 COL11A2P13942 1736 aaPredicted RBP9.24□□□□□ -0.93
VPS45-213ENST00000618148 SALL3Q9BXA9 1300 aa9.24□□□□□ -0.93
VPS45-213ENST00000618148 G3BP1Q13283 466 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS45-213ENST00000618148 VGLL2Q8N8G2 317 aa9.24□□□□□ -0.93
VPS45-213ENST00000618148 CDC5LQ99459 802 aaKnown RBP9.24□□□□□ -0.93
VPS45-213ENST00000618148 GPR108Q9NPR9 543 aa9.24□□□□□ -0.93
VPS45-213ENST00000618148 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
VPS45-213ENST00000618148 SRGNP10124 158 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 PDE4AP27815 886 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 PDE6BP35913 854 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 ANKRD45Q5TZF3 282 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 ZNF594Q96JF6 807 aaPredicted RBP9.23□□□□□ -0.93
VPS45-213ENST00000618148 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
VPS45-213ENST00000618148 CRAMP1Q96RY5 1269 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 DLEC1Q9Y238 1755 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 LRRC37AA6NMS7 1700 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 NPHP1O15259 732 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 PTGER2P43116 358 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 GRAPQ13588 217 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 LRRC24Q50LG9 513 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 GRAPLQ8TC17 118 aaPredicted RBP9.23□□□□□ -0.93
VPS45-213ENST00000618148 PUS3Q9BZE2 481 aaKnown RBP9.23□□□□□ -0.93
VPS45-213ENST00000618148 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 SIL1Q9H173 461 aa9.23□□□□□ -0.93
VPS45-213ENST00000618148 BSDC1Q9NW68 430 aaPredicted RBP9.23□□□□□ -0.93
VPS45-213ENST00000618148 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.23□□□□□ -0.93
VPS45-213ENST00000618148 A0A1B0GUL6 1792 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 ZNF609O15014 1411 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 KIAA1551Q9HCM1 1747 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 ZBTB7AO95365 584 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 NPR1P16066 1061 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 IGHMBP2P38935 993 aaKnown RBP9.22□□□□□ -0.93
VPS45-213ENST00000618148 RPS8P62241 208 aaKnown RBP9.22□□□□□ -0.93
VPS45-213ENST00000618148 TAF7LQ5H9L4 462 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 LDHAL6AQ6ZMR3 332 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
VPS45-213ENST00000618148 ANKRD18AQ8IVF6 992 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
VPS45-213ENST00000618148 OSBPL3Q9H4L5 887 aa9.22□□□□□ -0.93
VPS45-213ENST00000618148 STAP2Q9UGK3 403 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms