RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 PRAMEF18Q5VWM3 479 aa9.25□□□□□ -0.93
MUC1-227ENST00000615517 ZNF646O15015 1829 aaPredicted RBP9.25□□□□□ -0.93
MUC1-227ENST00000615517 ZNF609O15014 1411 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 ECE2O60344 883 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 VIL1P09327 827 aaKnown RBP9.24□□□□□ -0.93
MUC1-227ENST00000615517 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
MUC1-227ENST00000615517 DOK7Q18PE1 504 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 WASHC4Q2M389 1173 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 MCM10Q7L590 875 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 PPP1R42Q7Z4L9 355 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 POLLQ9UGP5 575 aa9.24□□□□□ -0.93
MUC1-227ENST00000615517 ZNF280AP59817 542 aaPredicted RBP9.23□□□□□ -0.93
MUC1-227ENST00000615517 SREBF2Q12772 1141 aa9.23□□□□□ -0.93
MUC1-227ENST00000615517 GRAPQ13588 217 aa9.23□□□□□ -0.93
MUC1-227ENST00000615517 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
MUC1-227ENST00000615517 KIF6Q6ZMV9 814 aa9.23□□□□□ -0.93
MUC1-227ENST00000615517 GRAPLQ8TC17 118 aaPredicted RBP9.23□□□□□ -0.93
MUC1-227ENST00000615517 PRO3102Q9H379 93 aa9.23□□□□□ -0.93
MUC1-227ENST00000615517 RRP7AQ9Y3A4 280 aaKnown RBP9.23□□□□□ -0.93
MUC1-227ENST00000615517 ZSWIM8A7E2V4 1837 aa9.23□□□□□ -0.93
MUC1-227ENST00000615517 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
MUC1-227ENST00000615517 HCLS1P14317 486 aaPredicted RBP9.22□□□□□ -0.93
MUC1-227ENST00000615517 MYL6BP14649 208 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
MUC1-227ENST00000615517 DCTN1Q14203 1278 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 CD99L2Q8TCZ2 262 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 ZNF333Q96JL9 665 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 UTP14AQ9BVJ6 771 aaKnown RBP9.22□□□□□ -0.93
MUC1-227ENST00000615517 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 KNSTRNQ9Y448 316 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 PITPNM2Q9BZ72 1349 aa9.22□□□□□ -0.93
MUC1-227ENST00000615517 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.94
MUC1-227ENST00000615517 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.94
MUC1-227ENST00000615517 SLC4A2P04920 1241 aa9.21□□□□□ -0.94
MUC1-227ENST00000615517 GPSM2P81274 684 aa9.21□□□□□ -0.94
MUC1-227ENST00000615517 PARP10Q53GL7 1025 aa9.21□□□□□ -0.94
MUC1-227ENST00000615517 SPRYD7Q5W111 196 aa9.21□□□□□ -0.94
MUC1-227ENST00000615517 DDX46Q7L014 1031 aaKnown RBP9.21□□□□□ -0.94
MUC1-227ENST00000615517 IFNL1Q8IU54 200 aa9.21□□□□□ -0.94
MUC1-227ENST00000615517 TMEM106CQ9BVX2 250 aa9.21□□□□□ -0.94
MUC1-227ENST00000615517 NSFL1CQ9UNZ2 370 aaKnown RBP9.21□□□□□ -0.94
MUC1-227ENST00000615517 C6orf229H3BNL8 230 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 ALDH1A1P00352 501 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
MUC1-227ENST00000615517 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 CELF1Q92879 486 aaKnown RBP9.2□□□□□ -0.94
MUC1-227ENST00000615517 ERO1AQ96HE7 468 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 GMLQ99445 158 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 MYOZ2Q9NPC6 264 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 VCANP13611 3396 aa9.2□□□□□ -0.94
MUC1-227ENST00000615517 ALPK3Q96L96 1907 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 WTIPA6NIX2 430 aaPredicted RBP9.19□□□□□ -0.94
MUC1-227ENST00000615517 PRKG1Q13976 671 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 NBPF9Q3BBW0 867 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
MUC1-227ENST00000615517 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 LRCH3Q96II8 777 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 EFCC1Q9HA90 598 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 FZD1Q9UP38 647 aa9.19□□□□□ -0.94
MUC1-227ENST00000615517 SPTBN5Q9NRC6 3674 aaKnown RBP9.18□□□□□ -0.94
MUC1-227ENST00000615517 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
MUC1-227ENST00000615517 CRHR2Q13324 411 aa9.18□□□□□ -0.94
MUC1-227ENST00000615517 TAF7Q15545 349 aaPredicted RBP9.18□□□□□ -0.94
MUC1-227ENST00000615517 ECM29Q5VYK3 1845 aa9.18□□□□□ -0.94
MUC1-227ENST00000615517 NLRP10Q86W26 655 aa9.18□□□□□ -0.94
MUC1-227ENST00000615517 AGBL3Q8NEM8 1001 aa9.18□□□□□ -0.94
MUC1-227ENST00000615517 THUMPD2Q9BTF0 503 aaKnown RBP9.18□□□□□ -0.94
MUC1-227ENST00000615517 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
MUC1-227ENST00000615517 OTOFQ9HC10 1997 aa9.18□□□□□ -0.94
MUC1-227ENST00000615517 PTCH2Q9Y6C5 1203 aa9.18□□□□□ -0.94
MUC1-227ENST00000615517 MANSC4A6NHS7 340 aaPredicted RBP9.17□□□□□ -0.94
MUC1-227ENST00000615517 MYCP01106 439 aaPredicted RBP9.17□□□□□ -0.94
MUC1-227ENST00000615517 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 HSPA5P11021 654 aaKnown RBP9.17□□□□□ -0.94
MUC1-227ENST00000615517 EIF4A1P60842 406 aaKnown RBP9.17□□□□□ -0.94
MUC1-227ENST00000615517 TCIRG1Q13488 830 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 PDIA6Q15084 440 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 SLC4A8Q2Y0W8 1093 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 RTF1Q92541 710 aaKnown RBP9.17□□□□□ -0.94
MUC1-227ENST00000615517 ZNF428Q96B54 188 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 EYA3Q99504 573 aa9.17□□□□□ -0.94
MUC1-227ENST00000615517 INHBEP58166 350 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 SP3Q02447 781 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 PROSER3Q2NL68 480 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 CC2D1BQ5T0F9 858 aaKnown RBP9.16□□□□□ -0.94
MUC1-227ENST00000615517 ARMC9Q7Z3E5 817 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 NECTIN2Q92692 538 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 DPF3Q92784 378 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 CLMNQ96JQ2 1002 aa9.16□□□□□ -0.94
MUC1-227ENST00000615517 ANGEL1Q9UNK9 670 aaKnown RBP9.16□□□□□ -0.94
MUC1-227ENST00000615517 SH3TC1Q8TE82 1336 aa9.15□□□□□ -0.94
MUC1-227ENST00000615517 WNT10BO00744 389 aa9.15□□□□□ -0.94
MUC1-227ENST00000615517 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
MUC1-227ENST00000615517 ANXA1P04083 346 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms