RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 ECE2O60344 883 aa22.16■■□□□ 1.14
PRKN-209ENST00000612485 TTLL11Q8NHH1 800 aa22.16■■□□□ 1.14
PRKN-209ENST00000612485 SPINK5Q9NQ38 1064 aaPredicted RBP22.16■■□□□ 1.14
PRKN-209ENST00000612485 CNOT7Q9UIV1 285 aaKnown RBP22.16■■□□□ 1.14
PRKN-209ENST00000612485 XDHP47989 1333 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 G3V3G9 751 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 H7C1D1 291 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 PSMD14O00487 310 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 HSPA1AP0DMV8 641 aaKnown RBP22.15■■□□□ 1.14
PRKN-209ENST00000612485 HSPA1BP0DMV9 641 aaKnown RBP22.15■■□□□ 1.14
PRKN-209ENST00000612485 GCKRQ14397 625 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 DOK7Q18PE1 504 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 DCAF8Q5TAQ9 597 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 UBE3BQ7Z3V4 1068 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 LINS1Q8NG48 757 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 DPF2Q92785 391 aa22.15■■□□□ 1.14
PRKN-209ENST00000612485 GPR101Q96P66 508 aaPredicted RBP22.15■■□□□ 1.14
PRKN-209ENST00000612485 RTL9Q8NET4 1388 aa22.14■■□□□ 1.14
PRKN-209ENST00000612485 ZC3H15Q8WU90 426 aaKnown RBP22.14■■□□□ 1.13
PRKN-209ENST00000612485 GREM2Q9H772 168 aa22.14■■□□□ 1.13
PRKN-209ENST00000612485 ATP2B4P23634 1241 aa22.13■■□□□ 1.13
PRKN-209ENST00000612485 RPS12P25398 132 aaKnown RBP22.13■■□□□ 1.13
PRKN-209ENST00000612485 MICALL2Q8IY33 904 aa22.13■■□□□ 1.13
PRKN-209ENST00000612485 PLA2G12BQ9BX93 195 aa22.13■■□□□ 1.13
PRKN-209ENST00000612485 ABT1Q9ULW3 272 aaKnown RBP22.13■■□□□ 1.13
PRKN-209ENST00000612485 ZBTB12Q9Y330 459 aaPredicted RBP22.13■■□□□ 1.13
PRKN-209ENST00000612485 MYH3P11055 1940 aa22.12■■□□□ 1.13
PRKN-209ENST00000612485 RASSF10A6NK89 507 aa22.12■■□□□ 1.13
PRKN-209ENST00000612485 DEFB115Q30KQ5 88 aa22.12■■□□□ 1.13
PRKN-209ENST00000612485 BSDC1Q9NW68 430 aaPredicted RBP22.12■■□□□ 1.13
PRKN-209ENST00000612485 PGAP2Q9UHJ9 254 aa22.12■■□□□ 1.13
PRKN-209ENST00000612485 VEGFBP49765 207 aa22.11■■□□□ 1.13
PRKN-209ENST00000612485 TRPM4Q8TD43 1214 aa22.11■■□□□ 1.13
PRKN-209ENST00000612485 TRAF5O00463 557 aa22.1■■□□□ 1.13
PRKN-209ENST00000612485 IGHMBP2P38935 993 aaKnown RBP22.1■■□□□ 1.13
PRKN-209ENST00000612485 HIRAP54198 1017 aaPredicted RBP22.1■■□□□ 1.13
PRKN-209ENST00000612485 CASP7P55210 303 aa22.1■■□□□ 1.13
PRKN-209ENST00000612485 KCNQ5Q9NR82 932 aa22.1■■□□□ 1.13
PRKN-209ENST00000612485 SHTN1A0MZ66 631 aa22.09■■□□□ 1.13
PRKN-209ENST00000612485 FMR1Q06787 632 aaKnown RBP eCLIP22.09■■□□□ 1.13
PRKN-209ENST00000612485 MINPP1Q9UNW1 487 aa22.09■■□□□ 1.13
PRKN-209ENST00000612485 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
PRKN-209ENST00000612485 VIL1P09327 827 aaKnown RBP22.08■■□□□ 1.13
PRKN-209ENST00000612485 CDC37L1Q7L3B6 337 aa22.08■■□□□ 1.13
PRKN-209ENST00000612485 F6X3S4 739 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 CSF1RP07333 972 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 ITGA6P23229 1130 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 BEND3Q5T5X7 828 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 CST9Q5W186 159 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 SAMD7Q7Z3H4 446 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 GLIS2Q9BZE0 524 aaPredicted RBP22.07■■□□□ 1.12
PRKN-209ENST00000612485 TRPM7Q96QT4 1865 aa22.07■■□□□ 1.12
PRKN-209ENST00000612485 FAM161AQ3B820 660 aa22.06■■□□□ 1.12
PRKN-209ENST00000612485 TBC1D10BQ4KMP7 808 aaPredicted RBP22.06■■□□□ 1.12
PRKN-209ENST00000612485 COL13A1Q5TAT6 717 aaPredicted RBP22.06■■□□□ 1.12
PRKN-209ENST00000612485 PODNQ7Z5L7 613 aa22.06■■□□□ 1.12
PRKN-209ENST00000612485 MPHOSPH8Q99549 860 aa22.06■■□□□ 1.12
PRKN-209ENST00000612485 MED23Q9ULK4 1368 aa22.06■■□□□ 1.12
PRKN-209ENST00000612485 CELF2O95319 508 aaKnown RBP22.05■■□□□ 1.12
PRKN-209ENST00000612485 CCT4P50991 539 aaKnown RBP22.05■■□□□ 1.12
PRKN-209ENST00000612485 TLL2Q9Y6L7 1015 aa22.05■■□□□ 1.12
PRKN-209ENST00000612485 WDR33Q9C0J8 1336 aaKnown RBP22.05■■□□□ 1.12
PRKN-209ENST00000612485 ECE1P42892 770 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 RSBN1LQ6PCB5 846 aaPredicted RBP22.04■■□□□ 1.12
PRKN-209ENST00000612485 PAXIP1Q6ZW49 1069 aaPredicted RBP22.04■■□□□ 1.12
PRKN-209ENST00000612485 AGBL3Q8NEM8 1001 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 AIDAQ96BJ3 306 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 ANKRD2Q9GZV1 360 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 LEMD3Q9Y2U8 911 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 SCN9AQ15858 1988 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 ZNF609O15014 1411 aa22.04■■□□□ 1.12
PRKN-209ENST00000612485 SPEF2Q9C093 1822 aa22.03■■□□□ 1.12
PRKN-209ENST00000612485 ANKRD18BA2A2Z9 1011 aa22.03■■□□□ 1.12
PRKN-209ENST00000612485 RBM26Q5T8P6 1007 aaKnown RBP22.03■■□□□ 1.12
PRKN-209ENST00000612485 USP17L3A6NCW0 530 aa22.02■■□□□ 1.12
PRKN-209ENST00000612485 USP17L4A6NCW7 530 aa22.02■■□□□ 1.12
PRKN-209ENST00000612485 E9PSI1 815 aa22.02■■□□□ 1.12
PRKN-209ENST00000612485 KIF4BQ2VIQ3 1234 aa22.02■■□□□ 1.12
PRKN-209ENST00000612485 USP17L1Q7RTZ2 530 aa22.02■■□□□ 1.12
PRKN-209ENST00000612485 GRM8O00222 908 aa22.01■■□□□ 1.11
PRKN-209ENST00000612485 ALDH1L1O75891 902 aa22.01■■□□□ 1.11
PRKN-209ENST00000612485 EGFRP00533 1210 aa22.01■■□□□ 1.11
PRKN-209ENST00000612485 IFIT5Q13325 482 aaKnown RBP22.01■■□□□ 1.11
PRKN-209ENST00000612485 USP48Q86UV5 1035 aa22.01■■□□□ 1.11
PRKN-209ENST00000612485 DCPSQ96C86 337 aaKnown RBP22.01■■□□□ 1.11
PRKN-209ENST00000612485 CAPNS2Q96L46 248 aa22.01■■□□□ 1.11
PRKN-209ENST00000612485 ZNF408Q9H9D4 720 aa22.01■■□□□ 1.11
PRKN-209ENST00000612485 WTIPA6NIX2 430 aaPredicted RBP22■■□□□ 1.11
PRKN-209ENST00000612485 ZNF280AP59817 542 aaPredicted RBP22■■□□□ 1.11
PRKN-209ENST00000612485 FOXO4P98177 505 aa22■■□□□ 1.11
PRKN-209ENST00000612485 MAP2K1Q02750 393 aaPredicted RBP22■■□□□ 1.11
PRKN-209ENST00000612485 SLC4A10Q6U841 1118 aa22■■□□□ 1.11
PRKN-209ENST00000612485 KRT26Q7Z3Y9 468 aa22■■□□□ 1.11
PRKN-209ENST00000612485 SAPCD2Q86UD0 394 aa22■■□□□ 1.11
PRKN-209ENST00000612485 SRCIN1Q9C0H9 1055 aa22■■□□□ 1.11
PRKN-209ENST00000612485 COA1Q9GZY4 146 aa22■■□□□ 1.11
PRKN-209ENST00000612485 WBP1LQ9NX94 342 aa22■■□□□ 1.11
PRKN-209ENST00000612485 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
PRKN-209ENST00000612485 CHMP3Q9Y3E7 222 aa22■■□□□ 1.11
PRKN-209ENST00000612485 ZNF804BA4D1E1 1349 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms