RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-206ENST00000601697 RNF214Q8ND24 703 aa16.77■□□□□ 0.27
PSMC4-206ENST00000601697 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.27
PSMC4-206ENST00000601697 ITGB4P16144 1822 aa16.76■□□□□ 0.27
PSMC4-206ENST00000601697 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
PSMC4-206ENST00000601697 FIBPO43427 364 aa16.76■□□□□ 0.27
PSMC4-206ENST00000601697 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
PSMC4-206ENST00000601697 ME3Q16798 604 aa16.76■□□□□ 0.27
PSMC4-206ENST00000601697 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
PSMC4-206ENST00000601697 CCDC191Q8NCU4 936 aa16.76■□□□□ 0.27
PSMC4-206ENST00000601697 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
PSMC4-206ENST00000601697 LARP6Q9BRS8 491 aaKnown RBP16.76■□□□□ 0.27
PSMC4-206ENST00000601697 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
PSMC4-206ENST00000601697 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
PSMC4-206ENST00000601697 KRT85P78386 507 aa16.75■□□□□ 0.27
PSMC4-206ENST00000601697 KIF6Q6ZMV9 814 aa16.75■□□□□ 0.27
PSMC4-206ENST00000601697 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
PSMC4-206ENST00000601697 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
PSMC4-206ENST00000601697 TJP1Q07157 1748 aa16.75■□□□□ 0.27
PSMC4-206ENST00000601697 LARP1BQ659C4 914 aaKnown RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
PSMC4-206ENST00000601697 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 ONECUT3O60422 494 aaPredicted RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 FOXO4P98177 505 aa16.74■□□□□ 0.27
PSMC4-206ENST00000601697 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 DDB1Q16531 1140 aa16.74■□□□□ 0.27
PSMC4-206ENST00000601697 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
PSMC4-206ENST00000601697 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
PSMC4-206ENST00000601697 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
PSMC4-206ENST00000601697 ELP1O95163 1332 aa16.73■□□□□ 0.27
PSMC4-206ENST00000601697 TFCP2Q12800 502 aa16.73■□□□□ 0.27
PSMC4-206ENST00000601697 LMBR1LQ6UX01 489 aa16.73■□□□□ 0.27
PSMC4-206ENST00000601697 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
PSMC4-206ENST00000601697 TAF5LO75529 589 aa16.72■□□□□ 0.27
PSMC4-206ENST00000601697 DNM1Q05193 864 aaKnown RBP16.72■□□□□ 0.27
PSMC4-206ENST00000601697 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
PSMC4-206ENST00000601697 HAUS7Q99871 368 aa16.72■□□□□ 0.27
PSMC4-206ENST00000601697 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
PSMC4-206ENST00000601697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
PSMC4-206ENST00000601697 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
PSMC4-206ENST00000601697 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
PSMC4-206ENST00000601697 ZNF772Q68DY9 489 aaPredicted RBP16.71■□□□□ 0.27
PSMC4-206ENST00000601697 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
PSMC4-206ENST00000601697 MCMDC2Q4G0Z9 681 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
PSMC4-206ENST00000601697 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
PSMC4-206ENST00000601697 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
PSMC4-206ENST00000601697 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
PSMC4-206ENST00000601697 NEK1Q96PY6 1258 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
PSMC4-206ENST00000601697 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.7■□□□□ 0.26
PSMC4-206ENST00000601697 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
PSMC4-206ENST00000601697 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
PSMC4-206ENST00000601697 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
PSMC4-206ENST00000601697 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
PSMC4-206ENST00000601697 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
PSMC4-206ENST00000601697 RRP9O43818 475 aaKnown RBP16.68■□□□□ 0.26
PSMC4-206ENST00000601697 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
PSMC4-206ENST00000601697 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
PSMC4-206ENST00000601697 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
PSMC4-206ENST00000601697 ZNF609O15014 1411 aa16.68■□□□□ 0.26
PSMC4-206ENST00000601697 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 PCCAP05165 728 aaPredicted RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 HELLSQ9NRZ9 838 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 KIF3AQ9Y496 699 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 TPM3P06753 285 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 LRRFIP1Q32MZ4 808 aaKnown RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 MARCH10Q8NA82 808 aaPredicted RBP16.67■□□□□ 0.26
PSMC4-206ENST00000601697 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 FUCA2Q9BTY2 467 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
PSMC4-206ENST00000601697 KDM4AO75164 1064 aa16.66■□□□□ 0.26
PSMC4-206ENST00000601697 RBM6P78332 1123 aaKnown RBP16.66■□□□□ 0.26
PSMC4-206ENST00000601697 LLPHQ9BRT6 129 aaKnown RBP16.66■□□□□ 0.26
PSMC4-206ENST00000601697 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
PSMC4-206ENST00000601697 USP25Q9UHP3 1055 aa16.66■□□□□ 0.26
PSMC4-206ENST00000601697 ADCY5O95622 1261 aa16.65■□□□□ 0.26
PSMC4-206ENST00000601697 IL6STP40189 918 aaPredicted RBP16.65■□□□□ 0.26
PSMC4-206ENST00000601697 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
PSMC4-206ENST00000601697 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
PSMC4-206ENST00000601697 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
PSMC4-206ENST00000601697 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
PSMC4-206ENST00000601697 DSCC1Q9BVC3 393 aa16.65■□□□□ 0.26
PSMC4-206ENST00000601697 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
PSMC4-206ENST00000601697 ZSCAN16Q9H4T2 348 aaPredicted RBP16.65■□□□□ 0.26
PSMC4-206ENST00000601697 DDX19AQ9NUU7 478 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms