RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 BICDL1Q6ZP65 573 aa24.28■■□□□ 1.48
PNKP-214ENST00000600573 EP400Q96L91 3159 aa24.28■■□□□ 1.48
PNKP-214ENST00000600573 PHF14O94880 888 aa24.28■■□□□ 1.48
PNKP-214ENST00000600573 PROM2Q8N271 834 aa24.28■■□□□ 1.48
PNKP-214ENST00000600573 FLAD1Q8NFF5 587 aa24.28■■□□□ 1.48
PNKP-214ENST00000600573 CARMIL3Q8ND23 1372 aa24.27■■□□□ 1.48
PNKP-214ENST00000600573 ATP2B3Q16720 1220 aa24.27■■□□□ 1.48
PNKP-214ENST00000600573 GORABQ5T7V8 394 aa24.27■■□□□ 1.48
PNKP-214ENST00000600573 SOCS7O14512 581 aa24.26■■□□□ 1.47
PNKP-214ENST00000600573 SGSM2O43147 1006 aa24.26■■□□□ 1.47
PNKP-214ENST00000600573 RAD50Q92878 1312 aa24.26■■□□□ 1.47
PNKP-214ENST00000600573 RABEP1Q15276 862 aa24.25■■□□□ 1.47
PNKP-214ENST00000600573 AMIGO3Q86WK7 504 aa24.25■■□□□ 1.47
PNKP-214ENST00000600573 VGLL2Q8N8G2 317 aa24.25■■□□□ 1.47
PNKP-214ENST00000600573 XAGE2Q96GT9 111 aa24.25■■□□□ 1.47
PNKP-214ENST00000600573 ZNF512BQ96KM6 892 aaPredicted RBP24.25■■□□□ 1.47
PNKP-214ENST00000600573 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
PNKP-214ENST00000600573 PUM3Q15397 648 aaKnown RBP24.24■■□□□ 1.47
PNKP-214ENST00000600573 KIAA1211Q6ZU35 1233 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 LRP5O75197 1615 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 LRRFIP1Q32MZ4 808 aaKnown RBP24.24■■□□□ 1.47
PNKP-214ENST00000600573 SMIM5Q71RC9 77 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 ANKRD18AQ8IVF6 992 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 LPIN2Q92539 896 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 FSD1Q9BTV5 496 aa24.24■■□□□ 1.47
PNKP-214ENST00000600573 RIC1Q4ADV7 1423 aa24.23■■□□□ 1.47
PNKP-214ENST00000600573 IFIT1P09914 478 aaKnown RBP24.23■■□□□ 1.47
PNKP-214ENST00000600573 ANAPC15P60006 121 aa24.23■■□□□ 1.47
PNKP-214ENST00000600573 SNRKQ9NRH2 765 aa24.23■■□□□ 1.47
PNKP-214ENST00000600573 GYS1P13807 737 aa24.22■■□□□ 1.47
PNKP-214ENST00000600573 NFIXQ14938 502 aa24.22■■□□□ 1.47
PNKP-214ENST00000600573 TTC39AQ5SRH9 613 aa24.22■■□□□ 1.47
PNKP-214ENST00000600573 ANO2Q9NQ90 1003 aa24.22■■□□□ 1.47
PNKP-214ENST00000600573 SEC31BQ9NQW1 1179 aa24.22■■□□□ 1.47
PNKP-214ENST00000600573 AKT1S1Q96B36 256 aa24.21■■□□□ 1.47
PNKP-214ENST00000600573 BSDC1Q9NW68 430 aaPredicted RBP24.21■■□□□ 1.47
PNKP-214ENST00000600573 UBR3Q6ZT12 1888 aa24.21■■□□□ 1.47
PNKP-214ENST00000600573 C4AP0C0L4 1744 aa24.21■■□□□ 1.47
PNKP-214ENST00000600573 NPHP1O15259 732 aa24.21■■□□□ 1.47
PNKP-214ENST00000600573 FGFR2P21802 821 aa24.21■■□□□ 1.47
PNKP-214ENST00000600573 CWC27Q6UX04 472 aaKnown RBP24.21■■□□□ 1.47
PNKP-214ENST00000600573 KBTBD3Q8NAB2 608 aa24.21■■□□□ 1.47
PNKP-214ENST00000600573 UQCRFS1P1P0C7P4 283 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 SLC5A1P13866 664 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 TM4SF1P30408 202 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 NBR1Q14596 966 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 IL17RAQ96F46 866 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 PAG1Q9NWQ8 432 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 TFCP2L1Q9NZI6 479 aa24.2■■□□□ 1.46
PNKP-214ENST00000600573 CNBD1Q8NA66 436 aa24.19■■□□□ 1.46
PNKP-214ENST00000600573 DNAJC2Q99543 621 aaKnown RBP24.19■■□□□ 1.46
PNKP-214ENST00000600573 NLGN1Q8N2Q7 840 aa24.17■■□□□ 1.46
PNKP-214ENST00000600573 SLKQ9H2G2 1235 aaPredicted RBP24.17■■□□□ 1.46
PNKP-214ENST00000600573 RGPD3A6NKT7 1758 aaPredicted RBP24.17■■□□□ 1.46
PNKP-214ENST00000600573 RGPD4Q7Z3J3 1758 aa24.17■■□□□ 1.46
PNKP-214ENST00000600573 ST5P78524 1137 aa24.17■■□□□ 1.46
PNKP-214ENST00000600573 DDX46Q7L014 1031 aaKnown RBP24.17■■□□□ 1.46
PNKP-214ENST00000600573 ANTXR1Q9H6X2 564 aa24.17■■□□□ 1.46
PNKP-214ENST00000600573 SPEF2Q9C093 1822 aa24.16■■□□□ 1.46
PNKP-214ENST00000600573 K7ELQ4 463 aaPredicted RBP24.16■■□□□ 1.46
PNKP-214ENST00000600573 ADORA1P30542 326 aa24.16■■□□□ 1.46
PNKP-214ENST00000600573 RPS8P62241 208 aaKnown RBP24.16■■□□□ 1.46
PNKP-214ENST00000600573 LSG1Q9H089 658 aaKnown RBP24.16■■□□□ 1.46
PNKP-214ENST00000600573 HSPA4P34932 840 aa24.15■■□□□ 1.46
PNKP-214ENST00000600573 CHRNDQ07001 517 aa24.15■■□□□ 1.46
PNKP-214ENST00000600573 TTF1Q15361 905 aaPredicted RBP24.15■■□□□ 1.46
PNKP-214ENST00000600573 SERPINB2P05120 415 aa24.14■■□□□ 1.46
PNKP-214ENST00000600573 ZFYP08048 801 aaPredicted RBP24.14■■□□□ 1.46
PNKP-214ENST00000600573 NMIQ13287 307 aaPredicted RBP24.14■■□□□ 1.46
PNKP-214ENST00000600573 UBE4AQ14139 1066 aa24.14■■□□□ 1.46
PNKP-214ENST00000600573 C3orf67Q6ZVT6 689 aa24.14■■□□□ 1.46
PNKP-214ENST00000600573 ANKRD2Q9GZV1 360 aa24.14■■□□□ 1.46
PNKP-214ENST00000600573 GOLIM4O00461 696 aa24.13■■□□□ 1.45
PNKP-214ENST00000600573 ARID4AP29374 1257 aaPredicted RBP24.13■■□□□ 1.45
PNKP-214ENST00000600573 HELLSQ9NRZ9 838 aa24.13■■□□□ 1.45
PNKP-214ENST00000600573 ST18O60284 1047 aa24.13■■□□□ 1.45
PNKP-214ENST00000600573 PRR5LQ6MZQ0 368 aa24.13■■□□□ 1.45
PNKP-214ENST00000600573 TNS1Q9HBL0 1735 aaKnown RBP24.13■■□□□ 1.45
PNKP-214ENST00000600573 MCMDC2Q4G0Z9 681 aa24.12■■□□□ 1.45
PNKP-214ENST00000600573 CCDC102BQ68D86 513 aa24.12■■□□□ 1.45
PNKP-214ENST00000600573 CD2BP2O95400 341 aaKnown RBP24.11■■□□□ 1.45
PNKP-214ENST00000600573 FKBP4Q02790 459 aaKnown RBP eCLIP24.11■■□□□ 1.45
PNKP-214ENST00000600573 ZNF827Q17R98 1081 aa24.11■■□□□ 1.45
PNKP-214ENST00000600573 ZSCAN25Q6NSZ9 544 aa24.11■■□□□ 1.45
PNKP-214ENST00000600573 FAM227BQ96M60 508 aa24.11■■□□□ 1.45
PNKP-214ENST00000600573 IL25Q9H293 177 aa24.11■■□□□ 1.45
PNKP-214ENST00000600573 MINPP1Q9UNW1 487 aa24.11■■□□□ 1.45
PNKP-214ENST00000600573 HELBQ8NG08 1087 aaPredicted RBP24.1■■□□□ 1.45
PNKP-214ENST00000600573 EDC3Q96F86 508 aaKnown RBP24.1■■□□□ 1.45
PNKP-214ENST00000600573 MED23Q9ULK4 1368 aa24.1■■□□□ 1.45
PNKP-214ENST00000600573 RNF113AO15541 343 aaKnown RBP24.1■■□□□ 1.45
PNKP-214ENST00000600573 CELF1Q92879 486 aaKnown RBP24.1■■□□□ 1.45
PNKP-214ENST00000600573 MAP4K1Q92918 833 aa24.1■■□□□ 1.45
PNKP-214ENST00000600573 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.1■■□□□ 1.452e-7■■■■■ 30.6
PNKP-214ENST00000600573 CHMP5Q9NZZ3 219 aa24.1■■□□□ 1.45
PNKP-214ENST00000600573 CCDC171Q6TFL3 1326 aa24.09■■□□□ 1.45
PNKP-214ENST00000600573 POLRMTO00411 1230 aaKnown RBP24.09■■□□□ 1.45
PNKP-214ENST00000600573 TAF5LO75529 589 aa24.09■■□□□ 1.45
PNKP-214ENST00000600573 MCM2P49736 904 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms