RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MINPP1Q9UNW1 487 aa24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 RIPOR2Q9Y4F9 1068 aa24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 ATG9AQ7Z3C6 839 aa24.88■■□□□ 1.57
SHKBP1-222ENST00000600320 HMMRO75330 724 aa24.87■■□□□ 1.57
SHKBP1-222ENST00000600320 GPSM2P81274 684 aa24.87■■□□□ 1.57
SHKBP1-222ENST00000600320 NOP58Q9Y2X3 529 aaKnown RBP24.87■■□□□ 1.57
SHKBP1-222ENST00000600320 A0A1B0GUL6 1792 aa24.86■■□□□ 1.57
SHKBP1-222ENST00000600320 SURF6O75683 361 aaKnown RBP24.86■■□□□ 1.57
SHKBP1-222ENST00000600320 CIAO1O76071 339 aa24.86■■□□□ 1.57
SHKBP1-222ENST00000600320 CHRNDQ07001 517 aa24.86■■□□□ 1.57
SHKBP1-222ENST00000600320 CCDC93Q567U6 631 aa24.85■■□□□ 1.57
SHKBP1-222ENST00000600320 HELBQ8NG08 1087 aaPredicted RBP24.85■■□□□ 1.57
SHKBP1-222ENST00000600320 FBXO3Q9UK99 471 aa24.85■■□□□ 1.57
SHKBP1-222ENST00000600320 EXOC6BQ9Y2D4 811 aa24.85■■□□□ 1.57
SHKBP1-222ENST00000600320 LTBP1Q14766 1721 aa24.84■■□□□ 1.57
SHKBP1-222ENST00000600320 DCAF8L1A6NGE4 600 aa24.84■■□□□ 1.57
SHKBP1-222ENST00000600320 CC2D2BQ6DHV5 1058 aa24.84■■□□□ 1.57
SHKBP1-222ENST00000600320 DUOX1Q9NRD9 1551 aa24.84■■□□□ 1.57
SHKBP1-222ENST00000600320 WTIPA6NIX2 430 aaPredicted RBP24.83■■□□□ 1.57
SHKBP1-222ENST00000600320 GPR162Q16538 588 aa24.83■■□□□ 1.57
SHKBP1-222ENST00000600320 NSFL1CQ9UNZ2 370 aaKnown RBP24.83■■□□□ 1.57
SHKBP1-222ENST00000600320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.83■■□□□ 1.57
SHKBP1-222ENST00000600320 TAF5LO75529 589 aa24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 IL15P40933 162 aaPredicted RBP24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 G3BP1Q13283 466 aaKnown RBP eCLIP24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 HDAC1Q13547 482 aaPredicted RBP24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 METTL24Q5JXM2 366 aa24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 SOGA3Q5TF21 947 aa24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 MPNDQ8N594 471 aa24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 VGLL2Q8N8G2 317 aa24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 MROH5Q6ZUA9 1318 aa24.82■■□□□ 1.56
SHKBP1-222ENST00000600320 SNAP23O00161 211 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 NFKBIEO00221 500 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 SASH1O94885 1247 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 IGHDP01880 384 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 TMX4Q9H1E5 349 aaPredicted RBP24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 PODXL2Q9NZ53 605 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 XDHP47989 1333 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 FER1L6Q2WGJ9 1857 aa24.81■■□□□ 1.56
SHKBP1-222ENST00000600320 DPP8Q6V1X1 898 aaPredicted RBP24.8■■□□□ 1.56
SHKBP1-222ENST00000600320 ANKRD2Q9GZV1 360 aa24.8■■□□□ 1.56
SHKBP1-222ENST00000600320 DCTPP1Q9H773 170 aa24.8■■□□□ 1.56
SHKBP1-222ENST00000600320 ANKIB1Q9P2G1 1089 aa24.8■■□□□ 1.56
SHKBP1-222ENST00000600320 RASSF7Q02833 373 aa24.79■■□□□ 1.56
SHKBP1-222ENST00000600320 TFCP2Q12800 502 aa24.79■■□□□ 1.56
SHKBP1-222ENST00000600320 OS9Q13438 667 aaPredicted RBP24.79■■□□□ 1.56
SHKBP1-222ENST00000600320 RTKN2Q8IZC4 609 aa24.79■■□□□ 1.56
SHKBP1-222ENST00000600320 GPR101Q96P66 508 aaPredicted RBP24.79■■□□□ 1.56
SHKBP1-222ENST00000600320 POLLQ9UGP5 575 aa24.79■■□□□ 1.56
SHKBP1-222ENST00000600320 ARHGAP27Q6ZUM4 889 aa24.78■■□□□ 1.56
SHKBP1-222ENST00000600320 TBC1D16Q8TBP0 767 aa24.78■■□□□ 1.56
SHKBP1-222ENST00000600320 UFL1O94874 794 aa24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 PDE8BO95263 885 aa24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 ATP2B4P23634 1241 aa24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 FKBP4Q02790 459 aaKnown RBP eCLIP24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 RTFDC1Q9BY42 306 aaPredicted RBP24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 RWDD1Q9H446 243 aaPredicted RBP24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 CEP126Q9P2H0 1117 aa24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 GGA1Q9UJY5 639 aa24.77■■□□□ 1.56
SHKBP1-222ENST00000600320 APBB1O00213 710 aa24.76■■□□□ 1.55
SHKBP1-222ENST00000600320 PRELPP51888 382 aa24.76■■□□□ 1.55
SHKBP1-222ENST00000600320 GRIPAP1Q4V328 841 aa24.76■■□□□ 1.55
SHKBP1-222ENST00000600320 PSMD1Q99460 953 aa24.76■■□□□ 1.55
SHKBP1-222ENST00000600320 LEMD3Q9Y2U8 911 aa24.76■■□□□ 1.55
SHKBP1-222ENST00000600320 C6orf229H3BNL8 230 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 FGFR2P21802 821 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 KLRK1P26718 216 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 HSP90AB4PQ58FF6 505 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 RHPN1Q8TCX5 695 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 TAOK3Q9H2K8 898 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 ZNF804BA4D1E1 1349 aa24.75■■□□□ 1.55
SHKBP1-222ENST00000600320 RAB11FIP3O75154 756 aa24.74■■□□□ 1.55
SHKBP1-222ENST00000600320 ZNF277Q9NRM2 450 aaPredicted RBP24.74■■□□□ 1.55
SHKBP1-222ENST00000600320 LTBP3Q9NS15 1303 aa24.74■■□□□ 1.55
SHKBP1-222ENST00000600320 IRS2Q9Y4H2 1338 aa24.74■■□□□ 1.55
SHKBP1-222ENST00000600320 GRIN3BO60391 1043 aa24.73■■□□□ 1.55
SHKBP1-222ENST00000600320 KCNJ4P48050 445 aa24.73■■□□□ 1.55
SHKBP1-222ENST00000600320 ERICH6BQ5W0A0 696 aa24.73■■□□□ 1.55
SHKBP1-222ENST00000600320 ERC1Q8IUD2 1116 aa24.73■■□□□ 1.55
SHKBP1-222ENST00000600320 IL1RAPL2Q9NP60 686 aa24.73■■□□□ 1.55
SHKBP1-222ENST00000600320 UBE4AQ14139 1066 aa24.72■■□□□ 1.55
SHKBP1-222ENST00000600320 PUM3Q15397 648 aaKnown RBP24.72■■□□□ 1.55
SHKBP1-222ENST00000600320 TXNRD3Q86VQ6 643 aa24.72■■□□□ 1.55
SHKBP1-222ENST00000600320 SUPT20HQ8NEM7 779 aa24.72■■□□□ 1.55
SHKBP1-222ENST00000600320 KIF1BPQ96EK5 621 aa24.72■■□□□ 1.55
SHKBP1-222ENST00000600320 ZNF609O15014 1411 aa24.71■■□□□ 1.55
SHKBP1-222ENST00000600320 RIMBP2O15034 1052 aa24.71■■□□□ 1.55
SHKBP1-222ENST00000600320 SMARCA5O60264 1052 aaPredicted RBP24.71■■□□□ 1.55
SHKBP1-222ENST00000600320 ATP2B3Q16720 1220 aa24.71■■□□□ 1.55
SHKBP1-222ENST00000600320 SMC5Q8IY18 1101 aa24.71■■□□□ 1.55
SHKBP1-222ENST00000600320 COL4A5P29400 1685 aa24.7■■□□□ 1.54
SHKBP1-222ENST00000600320 AOC3Q16853 763 aa24.7■■□□□ 1.54
SHKBP1-222ENST00000600320 TNNI3KQ59H18 835 aa24.7■■□□□ 1.54
SHKBP1-222ENST00000600320 GCC1Q96CN9 775 aa24.7■■□□□ 1.54
SHKBP1-222ENST00000600320 FPGT-TNNI3KV9GXZ4 949 aa24.7■■□□□ 1.54
SHKBP1-222ENST00000600320 MED23Q9ULK4 1368 aa24.69■■□□□ 1.54
SHKBP1-222ENST00000600320 A0A1B0GUL7 405 aa24.69■■□□□ 1.54
SHKBP1-222ENST00000600320 ADORA1P30542 326 aa24.69■■□□□ 1.54
SHKBP1-222ENST00000600320 IARSP41252 1262 aaKnown RBP24.69■■□□□ 1.54
SHKBP1-222ENST00000600320 TIMM10P62072 90 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms