RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 RBM26Q5T8P6 1007 aaKnown RBP19.5■□□□□ 0.71
XRCC1-209ENST00000599693 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
XRCC1-209ENST00000599693 KCNQ5Q9NR82 932 aa19.5■□□□□ 0.71
XRCC1-209ENST00000599693 AKAP11Q9UKA4 1901 aa19.5■□□□□ 0.71
XRCC1-209ENST00000599693 ZNF157P51786 506 aaPredicted RBP19.49■□□□□ 0.71
XRCC1-209ENST00000599693 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
XRCC1-209ENST00000599693 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
XRCC1-209ENST00000599693 DBF4Q9UBU7 674 aaPredicted RBP19.49■□□□□ 0.71
XRCC1-209ENST00000599693 IRS4O14654 1257 aaPredicted RBP19.48■□□□□ 0.71
XRCC1-209ENST00000599693 SULF1Q8IWU6 871 aa19.48■□□□□ 0.71
XRCC1-209ENST00000599693 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
XRCC1-209ENST00000599693 ZNF609O15014 1411 aa19.48■□□□□ 0.71
XRCC1-209ENST00000599693 PSME4Q14997 1843 aa19.47■□□□□ 0.71
XRCC1-209ENST00000599693 SLC10A3P09131 477 aa19.47■□□□□ 0.71
XRCC1-209ENST00000599693 VIL1P09327 827 aaKnown RBP19.47■□□□□ 0.71
XRCC1-209ENST00000599693 RPS8P62241 208 aaKnown RBP19.47■□□□□ 0.71
XRCC1-209ENST00000599693 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
XRCC1-209ENST00000599693 RALBP1Q15311 655 aa19.47■□□□□ 0.71
XRCC1-209ENST00000599693 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
XRCC1-209ENST00000599693 ZC3H12CQ9C0D7 883 aaKnown RBP19.47■□□□□ 0.71
XRCC1-209ENST00000599693 RNF186Q9NXI6 227 aa19.47■□□□□ 0.71
XRCC1-209ENST00000599693 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
XRCC1-209ENST00000599693 TRIM35Q9UPQ4 493 aa19.47■□□□□ 0.71
XRCC1-209ENST00000599693 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
XRCC1-209ENST00000599693 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
XRCC1-209ENST00000599693 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
XRCC1-209ENST00000599693 PDE4DIPQ5VU43 2346 aa19.46■□□□□ 0.71
XRCC1-209ENST00000599693 TRPA1O75762 1119 aa19.45■□□□□ 0.7
XRCC1-209ENST00000599693 CDCA5Q96FF9 252 aa19.45■□□□□ 0.7
XRCC1-209ENST00000599693 UFL1O94874 794 aa19.44■□□□□ 0.7
XRCC1-209ENST00000599693 GGA1Q9UJY5 639 aa19.44■□□□□ 0.7
XRCC1-209ENST00000599693 PAPPA2Q9BXP8 1791 aa19.44■□□□□ 0.7
XRCC1-209ENST00000599693 G3V3G9 751 aa19.43■□□□□ 0.7
XRCC1-209ENST00000599693 ZNF280AP59817 542 aaPredicted RBP19.43■□□□□ 0.7
XRCC1-209ENST00000599693 DCAF8Q5TAQ9 597 aa19.43■□□□□ 0.7
XRCC1-209ENST00000599693 ZBTB38Q8NAP3 1195 aaPredicted RBP19.43■□□□□ 0.7
XRCC1-209ENST00000599693 RUNDC1Q96C34 613 aa19.43■□□□□ 0.7
XRCC1-209ENST00000599693 CSRNP1Q96S65 589 aa19.43■□□□□ 0.7
XRCC1-209ENST00000599693 SEC31BQ9NQW1 1179 aa19.43■□□□□ 0.7
XRCC1-209ENST00000599693 ANKIB1Q9P2G1 1089 aa19.43■□□□□ 0.7
XRCC1-209ENST00000599693 HSP90B1P14625 803 aaKnown RBP19.42■□□□□ 0.7
XRCC1-209ENST00000599693 SOX10P56693 466 aa19.42■□□□□ 0.7
XRCC1-209ENST00000599693 ANGEL2Q5VTE6 544 aaKnown RBP19.42■□□□□ 0.7
XRCC1-209ENST00000599693 DUSP27Q5VZP5 1158 aa19.42■□□□□ 0.7
XRCC1-209ENST00000599693 RSBN1LQ6PCB5 846 aaPredicted RBP19.42■□□□□ 0.7
XRCC1-209ENST00000599693 RASAL3Q86YV0 1011 aa19.42■□□□□ 0.7
XRCC1-209ENST00000599693 REM2Q8IYK8 340 aaPredicted RBP19.42■□□□□ 0.7
XRCC1-209ENST00000599693 AGBL3Q8NEM8 1001 aa19.42■□□□□ 0.7
XRCC1-209ENST00000599693 GOLGA2Q08379 1002 aa19.41■□□□□ 0.7
XRCC1-209ENST00000599693 PCDH10Q9P2E7 1040 aa19.41■□□□□ 0.7
XRCC1-209ENST00000599693 FKBP1BP68106 108 aa19.4■□□□□ 0.7
XRCC1-209ENST00000599693 SCARF1Q14162 830 aa19.4■□□□□ 0.7
XRCC1-209ENST00000599693 CCDC152Q4G0S7 254 aa19.4■□□□□ 0.7
XRCC1-209ENST00000599693 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
XRCC1-209ENST00000599693 CTU1Q7Z7A3 348 aaKnown RBP19.4■□□□□ 0.7
XRCC1-209ENST00000599693 MYBBP1AQ9BQG0 1328 aaKnown RBP19.4■□□□□ 0.7
XRCC1-209ENST00000599693 PITPNM2Q9BZ72 1349 aa19.4■□□□□ 0.7
XRCC1-209ENST00000599693 GMLQ99445 158 aa19.39■□□□□ 0.69
XRCC1-209ENST00000599693 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
XRCC1-209ENST00000599693 XDHP47989 1333 aa19.38■□□□□ 0.69
XRCC1-209ENST00000599693 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
XRCC1-209ENST00000599693 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
XRCC1-209ENST00000599693 MYOZ2Q9NPC6 264 aa19.38■□□□□ 0.69
XRCC1-209ENST00000599693 MBIPQ9NS73 344 aa19.38■□□□□ 0.69
XRCC1-209ENST00000599693 PDE8AO60658 829 aa19.37■□□□□ 0.69
XRCC1-209ENST00000599693 USP17L8P0C7I0 530 aa19.37■□□□□ 0.69
XRCC1-209ENST00000599693 MYD88Q99836 296 aa19.37■□□□□ 0.69
XRCC1-209ENST00000599693 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
XRCC1-209ENST00000599693 USP17L3A6NCW0 530 aa19.36■□□□□ 0.69
XRCC1-209ENST00000599693 USP17L4A6NCW7 530 aa19.36■□□□□ 0.69
XRCC1-209ENST00000599693 USP17L1Q7RTZ2 530 aa19.36■□□□□ 0.69
XRCC1-209ENST00000599693 ANKRD18AQ8IVF6 992 aa19.36■□□□□ 0.69
XRCC1-209ENST00000599693 ZNF646O15015 1829 aaPredicted RBP19.35■□□□□ 0.69
XRCC1-209ENST00000599693 ATP2B4P23634 1241 aa19.35■□□□□ 0.69
XRCC1-209ENST00000599693 PODNQ7Z5L7 613 aa19.35■□□□□ 0.69
XRCC1-209ENST00000599693 CCDC85AQ96PX6 553 aaPredicted RBP19.35■□□□□ 0.69
XRCC1-209ENST00000599693 CWC25Q9NXE8 425 aaPredicted RBP19.35■□□□□ 0.69
XRCC1-209ENST00000599693 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
XRCC1-209ENST00000599693 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
XRCC1-209ENST00000599693 SPEF2Q9C093 1822 aa19.34■□□□□ 0.69
XRCC1-209ENST00000599693 MOB2Q70IA6 237 aa19.33■□□□□ 0.68
XRCC1-209ENST00000599693 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
XRCC1-209ENST00000599693 HPS5Q9UPZ3 1129 aa19.33■□□□□ 0.68
XRCC1-209ENST00000599693 MYH3P11055 1940 aa19.33■□□□□ 0.68
XRCC1-209ENST00000599693 MED23Q9ULK4 1368 aa19.32■□□□□ 0.68
XRCC1-209ENST00000599693 UBE2Q2LH0YL09 131 aa19.32■□□□□ 0.68
XRCC1-209ENST00000599693 PKN2Q16513 984 aaKnown RBP19.32■□□□□ 0.68
XRCC1-209ENST00000599693 METTL22Q9BUU2 404 aaPredicted RBP19.32■□□□□ 0.68
XRCC1-209ENST00000599693 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
XRCC1-209ENST00000599693 SCAF8Q9UPN6 1271 aaKnown RBP19.32■□□□□ 0.68
XRCC1-209ENST00000599693 CTSWP56202 376 aa19.31■□□□□ 0.68
XRCC1-209ENST00000599693 NBPF9Q3BBW0 867 aa19.31■□□□□ 0.68
XRCC1-209ENST00000599693 PRPF38BQ5VTL8 546 aaKnown RBP19.31■□□□□ 0.68
XRCC1-209ENST00000599693 ZNF296Q8WUU4 475 aaPredicted RBP19.31■□□□□ 0.68
XRCC1-209ENST00000599693 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
XRCC1-209ENST00000599693 HDAC9Q9UKV0 1011 aa19.31■□□□□ 0.68
XRCC1-209ENST00000599693 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
XRCC1-209ENST00000599693 DDX58O95786 925 aaKnown RBP19.3■□□□□ 0.68
XRCC1-209ENST00000599693 GNAI1P63096 354 aa19.3■□□□□ 0.68
XRCC1-209ENST00000599693 PRAMEF18Q5VWM3 479 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms