RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	JAKMIP1	Q96N16	626 aa	Known RBP	11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	CDK11B	P21127	795 aa	Known RBP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	PLA2G12B	Q9BX93	195 aa		11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	TRIM37	O94972	964 aa		11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	ZKSCAN1	P17029	563 aa	Predicted RBP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	ADRA2B	P18089	450 aa		11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	CAST	P20810	708 aa	Known RBP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	HLF	Q16534	295 aa		11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	PARP10	Q53GL7	1025 aa		11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	AK7	Q96M32	723 aa		11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	BICC1	Q9H694	974 aa	Known RBP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	TFIP11	Q9UBB9	837 aa	Known RBP	11.73	□□□□□ -0.53
FARP1-222	ENST00000597777	NLRP10	Q86W26	655 aa		11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	CCDC82	Q8N4S0	544 aa		11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	ZNF830	Q96NB3	372 aa	Predicted RBP	11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	MYH3	P11055	1940 aa		11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	UBE3B	Q7Z3V4	1068 aa		11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	FSD2	A1L4K1	749 aa		11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	SF3A1	Q15459	793 aa	Known RBP	11.72	□□□□□ -0.53
FARP1-222	ENST00000597777	FAM173B	Q6P4H8	233 aa		11.71	□□□□□ -0.53
FARP1-222	ENST00000597777	GPT	P24298	496 aa		11.71	□□□□□ -0.53
FARP1-222	ENST00000597777	PIBF1	Q8WXW3	757 aa		11.71	□□□□□ -0.53
FARP1-222	ENST00000597777	TBC1D2B	Q9UPU7	963 aa		11.71	□□□□□ -0.53
FARP1-222	ENST00000597777	RTCB	Q9Y3I0	505 aa	Known RBP	11.71	□□□□□ -0.53
FARP1-222	ENST00000597777	SLC4A8	Q2Y0W8	1093 aa		11.71	□□□□□ -0.54
FARP1-222	ENST00000597777	ERC1	Q8IUD2	1116 aa		11.71	□□□□□ -0.54
FARP1-222	ENST00000597777	NARF	Q9UHQ1	456 aa		11.71	□□□□□ -0.54
FARP1-222	ENST00000597777	FOXO4	P98177	505 aa		11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	EDC3	Q96F86	508 aa	Known RBP	11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	RABEP1	Q15276	862 aa		11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	GNPAT	O15228	680 aa		11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	KIAA2012	Q0VF49	1180 aa		11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	PLEKHM2	Q8IWE5	1019 aa		11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	LRRC4B	Q9NT99	713 aa		11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	DDX60	Q8IY21	1712 aa	Known RBP	11.7	□□□□□ -0.54
FARP1-222	ENST00000597777	MRE11	P49959	708 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	RRP12	Q5JTH9	1297 aa	Known RBP	11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	CHST3	Q7LGC8	479 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	UBN2	Q6ZU65	1347 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	COPRS	Q9NQ92	184 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	QSER1	Q2KHR3	1735 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	NUCB2	P80303	420 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	EPHA10	Q5JZY3	1008 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	KIF1BP	Q96EK5	621 aa		11.69	□□□□□ -0.54
FARP1-222	ENST00000597777	RAD21	O60216	631 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	HAND2	P61296	217 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	BMP2KL	Q5H9B9	411 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	TXNRD1	Q16881	649 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	TTC22	Q5TAA0	569 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	CNTROB	Q8N137	903 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	RFX5	P48382	616 aa	Predicted RBP	11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	PDE1A	P54750	535 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	BICDL1	Q6ZP65	573 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	FBXO3	Q9UK99	471 aa		11.68	□□□□□ -0.54
FARP1-222	ENST00000597777	CSF1R	P07333	972 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	CLCN1	P35523	988 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	KCNQ4	P56696	695 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	DDX46	Q7L014	1031 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	CKAP2L	Q8IYA6	745 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	UTP14A	Q9BVJ6	771 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	LRP5	O75197	1615 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	USP42	Q9H9J4	1324 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	BAG4	O95429	457 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	TRAPPC3L	Q5T215	181 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	OSBPL3	Q9H4L5	887 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	AOX1	Q06278	1338 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	TUBGCP6	Q96RT7	1819 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	ZPR1	O75312	459 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	GSPT1	P15170	499 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	CCT2	P78371	535 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	TRMT112	Q9UI30	125 aa	Known RBP	11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	SALL3	Q9BXA9	1300 aa		11.67	□□□□□ -0.54
FARP1-222	ENST00000597777	APBA3	O96018	575 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	RHPN1	Q8TCX5	695 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	SH3TC1	Q8TE82	1336 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	RTL9	Q8NET4	1388 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	PDE8A	O60658	829 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	LMBR1L	Q6UX01	489 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	CASZ1	Q86V15	1759 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	ESPN	B1AK53	854 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	NTSR2	O95665	410 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	PROM2	Q8N271	834 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	ARHGEF1	Q92888	912 aa	Known RBP	11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	BCL2L12	Q9HB09	334 aa		11.66	□□□□□ -0.54
FARP1-222	ENST00000597777	PTPN12	Q05209	780 aa	Known RBP	11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	SUSD4	Q5VX71	490 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	SYAP1	Q96A49	352 aa	Predicted RBP	11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	FAM89A	Q96GI7	184 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	NYX	Q9GZU5	481 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	IRS4	O14654	1257 aa	Predicted RBP	11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	CIAO1	O76071	339 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	RFC4	P35249	363 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	ISM2	Q6H9L7	571 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	TMX3	Q96JJ7	454 aa		11.65	□□□□□ -0.54
FARP1-222	ENST00000597777	RIC1	Q4ADV7	1423 aa		11.65	□□□□□ -0.54

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