RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 BCL2L13Q9BXK5 485 aa22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 ZC3H12CQ9C0D7 883 aaKnown RBP22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 DBNDD1Q9H9R9 158 aa22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 ANKIB1Q9P2G1 1089 aa22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 GGA1Q9UJY5 639 aa22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 XDHP47989 1333 aa22.85■■□□□ 1.25
CHMP2A-203ENST00000597209 DPF2Q92785 391 aa22.85■■□□□ 1.25
CHMP2A-203ENST00000597209 GREM2Q9H772 168 aa22.85■■□□□ 1.25
CHMP2A-203ENST00000597209 BSDC1Q9NW68 430 aaPredicted RBP22.85■■□□□ 1.25
CHMP2A-203ENST00000597209 ECE2O60344 883 aa22.84■■□□□ 1.25
CHMP2A-203ENST00000597209 UFL1O94874 794 aa22.84■■□□□ 1.25
CHMP2A-203ENST00000597209 CSF1RP07333 972 aa22.83■■□□□ 1.25
CHMP2A-203ENST00000597209 ATP2B4P23634 1241 aa22.83■■□□□ 1.25
CHMP2A-203ENST00000597209 BEND3Q5T5X7 828 aa22.83■■□□□ 1.25
CHMP2A-203ENST00000597209 PGAP2Q9UHJ9 254 aa22.83■■□□□ 1.25
CHMP2A-203ENST00000597209 PSMD14O00487 310 aa22.82■■□□□ 1.24
CHMP2A-203ENST00000597209 RPS12P25398 132 aaKnown RBP22.82■■□□□ 1.24
CHMP2A-203ENST00000597209 DOK7Q18PE1 504 aa22.82■■□□□ 1.24
CHMP2A-203ENST00000597209 ZC3H15Q8WU90 426 aaKnown RBP22.82■■□□□ 1.24
CHMP2A-203ENST00000597209 CNOT7Q9UIV1 285 aaKnown RBP22.82■■□□□ 1.24
CHMP2A-203ENST00000597209 CNTNAP1P78357 1384 aa22.81■■□□□ 1.24
CHMP2A-203ENST00000597209 E9PSI1 815 aa22.81■■□□□ 1.24
CHMP2A-203ENST00000597209 F6X3S4 739 aa22.81■■□□□ 1.24
CHMP2A-203ENST00000597209 GPR101Q96P66 508 aaPredicted RBP22.81■■□□□ 1.24
CHMP2A-203ENST00000597209 MINPP1Q9UNW1 487 aa22.81■■□□□ 1.24
CHMP2A-203ENST00000597209 H7C1D1 291 aa22.8■■□□□ 1.24
CHMP2A-203ENST00000597209 CCER2I3L3R5 266 aa22.8■■□□□ 1.24
CHMP2A-203ENST00000597209 MKRN1Q9UHC7 482 aaKnown RBP22.8■■□□□ 1.24
CHMP2A-203ENST00000597209 G3V3G9 751 aa22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 VIL1P09327 827 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 ITGA6P23229 1130 aa22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 DCAF8Q5TAQ9 597 aa22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 KCNQ5Q9NR82 932 aa22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 ZBTB12Q9Y330 459 aaPredicted RBP22.79■■□□□ 1.24
CHMP2A-203ENST00000597209 HIRAP54198 1017 aaPredicted RBP22.78■■□□□ 1.24
CHMP2A-203ENST00000597209 MICALL2Q8IY33 904 aa22.78■■□□□ 1.24
CHMP2A-203ENST00000597209 ZNF609O15014 1411 aa22.77■■□□□ 1.24
CHMP2A-203ENST00000597209 RASSF10A6NK89 507 aa22.77■■□□□ 1.24
CHMP2A-203ENST00000597209 ALDH1L1O75891 902 aa22.77■■□□□ 1.24
CHMP2A-203ENST00000597209 SLFN5Q08AF3 891 aa22.77■■□□□ 1.24
CHMP2A-203ENST00000597209 MED23Q9ULK4 1368 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 SPEF2Q9C093 1822 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 CCT4P50991 539 aaKnown RBP22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 FOXO4P98177 505 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 PODNQ7Z5L7 613 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 TRPM4Q8TD43 1214 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 LEMD3Q9Y2U8 911 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 SCN9AQ15858 1988 aa22.76■■□□□ 1.23
CHMP2A-203ENST00000597209 SHTN1A0MZ66 631 aa22.75■■□□□ 1.23
CHMP2A-203ENST00000597209 GRM8O00222 908 aa22.75■■□□□ 1.23
CHMP2A-203ENST00000597209 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
CHMP2A-203ENST00000597209 ANKRD2Q9GZV1 360 aa22.75■■□□□ 1.23
CHMP2A-203ENST00000597209 TRPM7Q96QT4 1865 aa22.75■■□□□ 1.23
CHMP2A-203ENST00000597209 PSME4Q14997 1843 aa22.74■■□□□ 1.23
CHMP2A-203ENST00000597209 ANKRD18BA2A2Z9 1011 aa22.74■■□□□ 1.23
CHMP2A-203ENST00000597209 DEFB115Q30KQ5 88 aa22.74■■□□□ 1.23
CHMP2A-203ENST00000597209 MRPL50Q8N5N7 158 aaKnown RBP22.74■■□□□ 1.23
CHMP2A-203ENST00000597209 SRCIN1Q9C0H9 1055 aa22.74■■□□□ 1.23
CHMP2A-203ENST00000597209 TRAF5O00463 557 aa22.73■■□□□ 1.23
CHMP2A-203ENST00000597209 FMR1Q06787 632 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHMP2A-203ENST00000597209 CST9Q5W186 159 aa22.73■■□□□ 1.23
CHMP2A-203ENST00000597209 CDC37L1Q7L3B6 337 aa22.73■■□□□ 1.23
CHMP2A-203ENST00000597209 AGBL3Q8NEM8 1001 aa22.73■■□□□ 1.23
CHMP2A-203ENST00000597209 HSPA1AP0DMV8 641 aaKnown RBP22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 HSPA1BP0DMV9 641 aaKnown RBP22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 VEGFBP49765 207 aa22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 RSBN1LQ6PCB5 846 aaPredicted RBP22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 SAMD7Q7Z3H4 446 aa22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 TRMT2AQ8IZ69 625 aaKnown RBP22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 C9orf78Q9NZ63 289 aaPredicted RBP22.72■■□□□ 1.23
CHMP2A-203ENST00000597209 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 IFIT5Q13325 482 aaKnown RBP22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 SLC4A10Q6U841 1118 aa22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 GLIS2Q9BZE0 524 aaPredicted RBP22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 COA1Q9GZY4 146 aa22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 ABT1Q9ULW3 272 aaKnown RBP22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 PTPRCP08575 1304 aa22.71■■□□□ 1.23
CHMP2A-203ENST00000597209 USP17L3A6NCW0 530 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 USP17L4A6NCW7 530 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 ZNF280AP59817 542 aaPredicted RBP22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 IFFO2Q5TF58 517 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 LMBR1LQ6UX01 489 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 USP17L1Q7RTZ2 530 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 GMLQ99445 158 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 ZNF804BA4D1E1 1349 aa22.7■■□□□ 1.22
CHMP2A-203ENST00000597209 UTYO14607 1347 aa22.69■■□□□ 1.22
CHMP2A-203ENST00000597209 CHRNDQ07001 517 aa22.69■■□□□ 1.22
CHMP2A-203ENST00000597209 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
CHMP2A-203ENST00000597209 EPHA10Q5JZY3 1008 aa22.69■■□□□ 1.22
CHMP2A-203ENST00000597209 SSH1Q8WYL5 1049 aa22.69■■□□□ 1.22
CHMP2A-203ENST00000597209 TLL2Q9Y6L7 1015 aa22.69■■□□□ 1.22
CHMP2A-203ENST00000597209 EGFRP00533 1210 aa22.68■■□□□ 1.22
CHMP2A-203ENST00000597209 CDCA7LQ96GN5 454 aa22.68■■□□□ 1.22
CHMP2A-203ENST00000597209 CCDC57Q2TAC2 916 aa22.67■■□□□ 1.22
CHMP2A-203ENST00000597209 KIF4BQ2VIQ3 1234 aa22.67■■□□□ 1.22
CHMP2A-203ENST00000597209 TXNRD3Q86VQ6 643 aa22.67■■□□□ 1.22
CHMP2A-203ENST00000597209 CHMP3Q9Y3E7 222 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms