RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 UFL1O94874 794 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 ATP2B4P23634 1241 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
CCDC9-203ENST00000596938 MRPL50Q8N5N7 158 aaKnown RBP13.36□□□□□ -0.27
CCDC9-203ENST00000596938 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 DPF2Q92785 391 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
CCDC9-203ENST00000596938 SCN4AP35499 1836 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 GRM8O00222 908 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 ITGA6P23229 1130 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
CCDC9-203ENST00000596938 FOXO4P98177 505 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 DBNDD1Q9H9R9 158 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 DUOX1Q9NRD9 1551 aa13.35□□□□□ -0.27
CCDC9-203ENST00000596938 COL4A1P02462 1669 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 LRRC37AA6NMS7 1700 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 PSMD14O00487 310 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 ECE2O60344 883 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 RPS12P25398 132 aaKnown RBP13.34□□□□□ -0.27
CCDC9-203ENST00000596938 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 ALDH1L2Q3SY69 923 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 MAP1SQ66K74 1059 aaPredicted RBP13.34□□□□□ -0.27
CCDC9-203ENST00000596938 SLC4A10Q6U841 1118 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
CCDC9-203ENST00000596938 SSH1Q8WYL5 1049 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
CCDC9-203ENST00000596938 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 CNOT7Q9UIV1 285 aaKnown RBP13.34□□□□□ -0.27
CCDC9-203ENST00000596938 PTPRCP08575 1304 aa13.34□□□□□ -0.27
CCDC9-203ENST00000596938 ANKRD18BA2A2Z9 1011 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 G3V3G9 751 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 H7C1D1 291 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
CCDC9-203ENST00000596938 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
CCDC9-203ENST00000596938 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 PODNQ7Z5L7 613 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 MPHOSPH8Q99549 860 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 C9orf78Q9NZ63 289 aaPredicted RBP13.33□□□□□ -0.28
CCDC9-203ENST00000596938 LEMD3Q9Y2U8 911 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 PCNTO95613 3336 aa13.33□□□□□ -0.28
CCDC9-203ENST00000596938 CCT4P50991 539 aaKnown RBP13.32□□□□□ -0.28
CCDC9-203ENST00000596938 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
CCDC9-203ENST00000596938 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
CCDC9-203ENST00000596938 UTYO14607 1347 aa13.32□□□□□ -0.28
CCDC9-203ENST00000596938 TAF1P21675 1872 aa13.31□□□□□ -0.28
CCDC9-203ENST00000596938 WTIPA6NIX2 430 aaPredicted RBP13.31□□□□□ -0.28
CCDC9-203ENST00000596938 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
CCDC9-203ENST00000596938 EPHA10Q5JZY3 1008 aa13.31□□□□□ -0.28
CCDC9-203ENST00000596938 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
CCDC9-203ENST00000596938 LMBR1LQ6UX01 489 aa13.31□□□□□ -0.28
CCDC9-203ENST00000596938 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
CCDC9-203ENST00000596938 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
CCDC9-203ENST00000596938 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
CCDC9-203ENST00000596938 MIER1Q8N108 512 aa13.3□□□□□ -0.28
CCDC9-203ENST00000596938 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
CCDC9-203ENST00000596938 ADAMTSL1Q8N6G6 1762 aa13.3□□□□□ -0.28
CCDC9-203ENST00000596938 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 CHRNDQ07001 517 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
CCDC9-203ENST00000596938 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 AGBL3Q8NEM8 1001 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 KAZALD1Q96I82 304 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 COA1Q9GZY4 146 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 LTBP1Q14766 1721 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 ZNF804BA4D1E1 1349 aa13.29□□□□□ -0.28
CCDC9-203ENST00000596938 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
CCDC9-203ENST00000596938 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
CCDC9-203ENST00000596938 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
CCDC9-203ENST00000596938 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
CCDC9-203ENST00000596938 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
CCDC9-203ENST00000596938 GMLQ99445 158 aa13.28□□□□□ -0.28
CCDC9-203ENST00000596938 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
CCDC9-203ENST00000596938 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
CCDC9-203ENST00000596938 CST9Q5W186 159 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 C15orf52Q6ZUT6 534 aaKnown RBP13.27□□□□□ -0.29
CCDC9-203ENST00000596938 CDC37L1Q7L3B6 337 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 TXNRD3Q86VQ6 643 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 USP44Q9H0E7 712 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.29
CCDC9-203ENST00000596938 CNTNAP1P78357 1384 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 ZNF609O15014 1411 aa13.27□□□□□ -0.29
CCDC9-203ENST00000596938 RASSF10A6NK89 507 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 TRAF5O00463 557 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 KCNJ4P48050 445 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 MMP14P50281 582 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 FMR1Q06787 632 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC9-203ENST00000596938 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 RABL6Q3YEC7 729 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms