RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 SCN9AQ15858 1988 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 H7C1W4 665 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 EPS15P42566 896 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 CXCL9Q07325 125 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 GCKRQ14397 625 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 CCDC152Q4G0S7 254 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 EAPPQ56P03 285 aaPredicted RBP7.48□□□□□ -1.21
SSX4B-201ENST00000595235 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 TTLL11Q8NHH1 800 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 GREM2Q9H772 168 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 DBNDD1Q9H9R9 158 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
SSX4B-201ENST00000595235 NSFL1CQ9UNZ2 370 aaKnown RBP7.48□□□□□ -1.21
SSX4B-201ENST00000595235 RTL9Q8NET4 1388 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 C6orf229H3BNL8 230 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 CCER2I3L3R5 266 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 RIMBP2O15034 1052 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 RAD17O75943 681 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 HSP90B1P14625 803 aaKnown RBP7.47□□□□□ -1.21
SSX4B-201ENST00000595235 WASHC4Q2M389 1173 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 BEND3Q5T5X7 828 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 LINS1Q8NG48 757 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 TBC1D16Q8TBP0 767 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 CDCA7LQ96GN5 454 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 PODXL2Q9NZ53 605 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 PASKQ96RG2 1323 aa7.47□□□□□ -1.21
SSX4B-201ENST00000595235 SHTN1A0MZ66 631 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 WTIPA6NIX2 430 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-201ENST00000595235 E9PSI1 815 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 ECE2O60344 883 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 UFL1O94874 794 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-201ENST00000595235 LMOD1P29536 600 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-201ENST00000595235 GMPSP49915 693 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-201ENST00000595235 SLFN5Q08AF3 891 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 DOK7Q18PE1 504 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 FAM161AQ3B820 660 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 MAP1SQ66K74 1059 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-201ENST00000595235 CIAPIN1Q6FI81 312 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-201ENST00000595235 PIP4P2Q8N4L2 257 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 KLRG1Q96E93 195 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 PLA2G12BQ9BX93 195 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 KCNQ5Q9NR82 932 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 GPRC5DQ9NZD1 345 aa7.46□□□□□ -1.22
SSX4B-201ENST00000595235 TRPM7Q96QT4 1865 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 PSMD14O00487 310 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 CSF1RP07333 972 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 ITGA6P23229 1130 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 FOXO4P98177 505 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 FMR1Q06787 632 aaKnown RBP eCLIP7.45□□□□□ -1.22
SSX4B-201ENST00000595235 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
SSX4B-201ENST00000595235 CDC5LQ99459 802 aaKnown RBP7.45□□□□□ -1.22
SSX4B-201ENST00000595235 EYA3Q99504 573 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 BCL2L13Q9BXK5 485 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 GGA1Q9UJY5 639 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 MINPP1Q9UNW1 487 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 XDHP47989 1333 aa7.45□□□□□ -1.22
SSX4B-201ENST00000595235 TNIP1Q15025 636 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 EPHA10Q5JZY3 1008 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 SLC4A10Q6U841 1118 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 USP50Q70EL3 339 aaPredicted RBP7.44□□□□□ -1.22
SSX4B-201ENST00000595235 TRMT2AQ8IZ69 625 aaKnown RBP7.44□□□□□ -1.22
SSX4B-201ENST00000595235 CNTROBQ8N137 903 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 JMYQ8N9B5 988 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 TRPM4Q8TD43 1214 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 SSH1Q8WYL5 1049 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 ADARB2Q9NS39 739 aaKnown RBP7.44□□□□□ -1.22
SSX4B-201ENST00000595235 BSDC1Q9NW68 430 aaPredicted RBP7.44□□□□□ -1.22
SSX4B-201ENST00000595235 MED23Q9ULK4 1368 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 ZNF609O15014 1411 aa7.44□□□□□ -1.22
SSX4B-201ENST00000595235 GRM8O00222 908 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 TRAF5O00463 557 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 ALDH1L1O75891 902 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 EGFRP00533 1210 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 PRR29P0C7W0 189 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 ATP2B4P23634 1241 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 KLRK1P26718 216 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 IGHMBP2P38935 993 aaKnown RBP7.43□□□□□ -1.22
SSX4B-201ENST00000595235 CCT4P50991 539 aaKnown RBP7.43□□□□□ -1.22
SSX4B-201ENST00000595235 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-201ENST00000595235 MICALL2Q8IY33 904 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 MIER1Q8N108 512 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 KAZALD1Q96I82 304 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 SUCLG2Q96I99 432 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 ZC3H12CQ9C0D7 883 aaKnown RBP7.43□□□□□ -1.22
SSX4B-201ENST00000595235 SRCIN1Q9C0H9 1055 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
SSX4B-201ENST00000595235 CNOT7Q9UIV1 285 aaKnown RBP7.43□□□□□ -1.22
SSX4B-201ENST00000595235 CNTNAP1P78357 1384 aa7.43□□□□□ -1.22
SSX4B-201ENST00000595235 THSD7BQ9C0I4 1608 aa7.42□□□□□ -1.22
SSX4B-201ENST00000595235 ANKRD18BA2A2Z9 1011 aa7.42□□□□□ -1.22
SSX4B-201ENST00000595235 TMEM88BA6NKF7 163 aa7.42□□□□□ -1.22
SSX4B-201ENST00000595235 VIL1P09327 827 aaKnown RBP7.42□□□□□ -1.22
SSX4B-201ENST00000595235 NBPF7P0C2Y1 421 aaPredicted RBP7.42□□□□□ -1.22
SSX4B-201ENST00000595235 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.22
SSX4B-201ENST00000595235 CHRNDQ07001 517 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms