RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
DNMT1-229ENST00000593049 SPEF2Q9C093 1822 aa20.68■□□□□ 0.9
DNMT1-229ENST00000593049 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-229ENST00000593049 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 CCDC57Q2TAC2 916 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 TBC1D16Q8TBP0 767 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 POLLQ9UGP5 575 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 COL4A5P29400 1685 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 SCN4AP35499 1836 aa20.67■□□□□ 0.9
DNMT1-229ENST00000593049 UFL1O94874 794 aa20.66■□□□□ 0.9
DNMT1-229ENST00000593049 TAF7LQ5H9L4 462 aa20.66■□□□□ 0.9
DNMT1-229ENST00000593049 RBM46Q8TBY0 533 aaKnown RBP20.66■□□□□ 0.9
DNMT1-229ENST00000593049 SUCLG2Q96I99 432 aa20.66■□□□□ 0.9
DNMT1-229ENST00000593049 ZC3H12CQ9C0D7 883 aaKnown RBP20.66■□□□□ 0.9
DNMT1-229ENST00000593049 ANKRD2Q9GZV1 360 aa20.66■□□□□ 0.9
DNMT1-229ENST00000593049 USP44Q9H0E7 712 aa20.66■□□□□ 0.9
DNMT1-229ENST00000593049 MINPP1Q9UNW1 487 aa20.66■□□□□ 0.9
DNMT1-229ENST00000593049 BCAR3O75815 825 aa20.65■□□□□ 0.9
DNMT1-229ENST00000593049 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
DNMT1-229ENST00000593049 RABL6Q3YEC7 729 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-229ENST00000593049 EPHA10Q5JZY3 1008 aa20.64■□□□□ 0.89
DNMT1-229ENST00000593049 POTECB2RU33 542 aa20.63■□□□□ 0.89
DNMT1-229ENST00000593049 G3V3G9 751 aa20.63■□□□□ 0.89
DNMT1-229ENST00000593049 TNIP1Q15025 636 aa20.63■□□□□ 0.89
DNMT1-229ENST00000593049 DCAF8Q5TAQ9 597 aa20.63■□□□□ 0.89
DNMT1-229ENST00000593049 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
DNMT1-229ENST00000593049 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-229ENST00000593049 LEMD3Q9Y2U8 911 aa20.63■□□□□ 0.89
DNMT1-229ENST00000593049 GJA3Q9Y6H8 435 aa20.63■□□□□ 0.89
DNMT1-229ENST00000593049 UBTFL1P0CB47 393 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-229ENST00000593049 FSTL1Q12841 308 aa20.62■□□□□ 0.89
DNMT1-229ENST00000593049 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
DNMT1-229ENST00000593049 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
DNMT1-229ENST00000593049 BICC1Q9H694 974 aaKnown RBP20.62■□□□□ 0.89
DNMT1-229ENST00000593049 RIMBP2O15034 1052 aa20.61■□□□□ 0.89
DNMT1-229ENST00000593049 TRIM27P14373 513 aa20.61■□□□□ 0.89
DNMT1-229ENST00000593049 LMOD1P29536 600 aaPredicted RBP20.61■□□□□ 0.89
DNMT1-229ENST00000593049 CXCL9Q07325 125 aa20.61■□□□□ 0.89
DNMT1-229ENST00000593049 CIAPIN1Q6FI81 312 aa20.61■□□□□ 0.89
DNMT1-229ENST00000593049 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
DNMT1-229ENST00000593049 HACL1Q9UJ83 578 aa20.61■□□□□ 0.89
DNMT1-229ENST00000593049 SMC1BQ8NDV3 1235 aa20.6■□□□□ 0.89
DNMT1-229ENST00000593049 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 ECE2O60344 883 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 GNAI3P08754 354 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 CHRNDQ07001 517 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 ANKRD44Q8N8A2 993 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 TAF1DQ9H5J8 278 aaPredicted RBP20.59■□□□□ 0.89
DNMT1-229ENST00000593049 DBNDD1Q9H9R9 158 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
DNMT1-229ENST00000593049 KCNJ4P48050 445 aa20.58■□□□□ 0.89
DNMT1-229ENST00000593049 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.89
DNMT1-229ENST00000593049 ZNF804BA4D1E1 1349 aa20.57■□□□□ 0.88
DNMT1-229ENST00000593049 YDJCA8MPS7 323 aa20.57■□□□□ 0.88
DNMT1-229ENST00000593049 RAD17O75943 681 aa20.57■□□□□ 0.88
DNMT1-229ENST00000593049 EPHX2P34913 555 aa20.57■□□□□ 0.88
DNMT1-229ENST00000593049 DOK7Q18PE1 504 aa20.57■□□□□ 0.88
DNMT1-229ENST00000593049 PODNQ7Z5L7 613 aa20.56■□□□□ 0.88
DNMT1-229ENST00000593049 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
DNMT1-229ENST00000593049 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-229ENST00000593049 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-229ENST00000593049 A0A1B0GUL6 1792 aa20.55■□□□□ 0.88
DNMT1-229ENST00000593049 RPS12P25398 132 aaKnown RBP20.55■□□□□ 0.88
DNMT1-229ENST00000593049 SCNN1DP51172 638 aa20.55■□□□□ 0.88
DNMT1-229ENST00000593049 LDHDQ86WU2 507 aa20.55■□□□□ 0.88
DNMT1-229ENST00000593049 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
DNMT1-229ENST00000593049 COA1Q9GZY4 146 aa20.55■□□□□ 0.88
DNMT1-229ENST00000593049 MROH5Q6ZUA9 1318 aa20.54■□□□□ 0.88
DNMT1-229ENST00000593049 DPF2Q92785 391 aa20.54■□□□□ 0.88
DNMT1-229ENST00000593049 MEIS3Q99687 375 aa20.54■□□□□ 0.88
DNMT1-229ENST00000593049 GPRC5DQ9NZD1 345 aa20.54■□□□□ 0.88
DNMT1-229ENST00000593049 PSMD14O00487 310 aa20.53■□□□□ 0.88
DNMT1-229ENST00000593049 MS4A1P11836 297 aa20.53■□□□□ 0.88
DNMT1-229ENST00000593049 HSPA6P17066 643 aa20.53■□□□□ 0.88
DNMT1-229ENST00000593049 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
DNMT1-229ENST00000593049 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
DNMT1-229ENST00000593049 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
DNMT1-229ENST00000593049 DZIP1LQ8IYY4 767 aaKnown RBP20.53■□□□□ 0.88
DNMT1-229ENST00000593049 ADARB2Q9NS39 739 aaKnown RBP20.53■□□□□ 0.88
DNMT1-229ENST00000593049 LRRFIP2Q9Y608 721 aaKnown RBP20.53■□□□□ 0.88
DNMT1-229ENST00000593049 PSME4Q14997 1843 aa20.53■□□□□ 0.88
DNMT1-229ENST00000593049 TAF5LO75529 589 aa20.52■□□□□ 0.88
DNMT1-229ENST00000593049 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
DNMT1-229ENST00000593049 EAPPQ56P03 285 aaPredicted RBP20.52■□□□□ 0.88
DNMT1-229ENST00000593049 USP50Q70EL3 339 aaPredicted RBP20.52■□□□□ 0.88
DNMT1-229ENST00000593049 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
DNMT1-229ENST00000593049 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
DNMT1-229ENST00000593049 H7C1D1 291 aa20.51■□□□□ 0.87
DNMT1-229ENST00000593049 EPS15P42566 896 aa20.51■□□□□ 0.87
DNMT1-229ENST00000593049 UBE4AQ14139 1066 aa20.51■□□□□ 0.87
DNMT1-229ENST00000593049 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
DNMT1-229ENST00000593049 HELBQ8NG08 1087 aaPredicted RBP20.51■□□□□ 0.87
DNMT1-229ENST00000593049 SCN9AQ15858 1988 aa20.5■□□□□ 0.87
DNMT1-229ENST00000593049 USP17L3A6NCW0 530 aa20.5■□□□□ 0.87
DNMT1-229ENST00000593049 USP17L4A6NCW7 530 aa20.5■□□□□ 0.87
DNMT1-229ENST00000593049 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
DNMT1-229ENST00000593049 PLIN1O60240 522 aa20.5■□□□□ 0.87
DNMT1-229ENST00000593049 GNAI2P04899 355 aa20.5■□□□□ 0.87
DNMT1-229ENST00000593049 USP17L1Q7RTZ2 530 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms