RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
TRIM47-206ENST00000592942 LARGE2Q8N3Y3 721 aa19.27■□□□□ 0.68
TRIM47-206ENST00000592942 TMEM57Q8N5G2 664 aa19.27■□□□□ 0.68
TRIM47-206ENST00000592942 GPR101Q96P66 508 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-206ENST00000592942 NMRK2Q9NPI5 230 aa19.27■□□□□ 0.68
TRIM47-206ENST00000592942 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
TRIM47-206ENST00000592942 ZNF541Q9H0D2 1346 aa19.26■□□□□ 0.67
TRIM47-206ENST00000592942 TIAM2Q8IVF5 1701 aa19.26■□□□□ 0.67
TRIM47-206ENST00000592942 DDNO94850 711 aaPredicted RBP19.26■□□□□ 0.67
TRIM47-206ENST00000592942 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
TRIM47-206ENST00000592942 ANKIB1Q9P2G1 1089 aa19.26■□□□□ 0.67
TRIM47-206ENST00000592942 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
TRIM47-206ENST00000592942 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 WASHC4Q2M389 1173 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 DPY19L2Q6NUT2 758 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 JDP2Q8WYK2 163 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
TRIM47-206ENST00000592942 MPHOSPH8Q99549 860 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 RRAGCQ9HB90 399 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 XDHP47989 1333 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
TRIM47-206ENST00000592942 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
TRIM47-206ENST00000592942 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
TRIM47-206ENST00000592942 UBTFL1P0CB47 393 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-206ENST00000592942 HSPA6P17066 643 aa19.24■□□□□ 0.67
TRIM47-206ENST00000592942 RFX5P48382 616 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-206ENST00000592942 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
TRIM47-206ENST00000592942 PUS3Q9BZE2 481 aaKnown RBP19.24■□□□□ 0.67
TRIM47-206ENST00000592942 GGA1Q9UJY5 639 aa19.24■□□□□ 0.67
TRIM47-206ENST00000592942 UFL1O94874 794 aa19.23■□□□□ 0.67
TRIM47-206ENST00000592942 ATP2B4P23634 1241 aa19.23■□□□□ 0.67
TRIM47-206ENST00000592942 CHRNDQ07001 517 aa19.23■□□□□ 0.67
TRIM47-206ENST00000592942 ZNRF3Q9ULT6 936 aa19.23■□□□□ 0.67
TRIM47-206ENST00000592942 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
TRIM47-206ENST00000592942 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
TRIM47-206ENST00000592942 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
TRIM47-206ENST00000592942 SNAP23O00161 211 aa19.22■□□□□ 0.67
TRIM47-206ENST00000592942 LDHAL6AQ6ZMR3 332 aa19.22■□□□□ 0.67
TRIM47-206ENST00000592942 NIM1KQ8IY84 436 aa19.22■□□□□ 0.67
TRIM47-206ENST00000592942 KLHDC4Q8TBB5 520 aa19.22■□□□□ 0.67
TRIM47-206ENST00000592942 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-206ENST00000592942 PLIN1O60240 522 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 CXCL9Q07325 125 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 DOK7Q18PE1 504 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 HELBQ8NG08 1087 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-206ENST00000592942 PANK1Q8TE04 598 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 EYA3Q99504 573 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 ANKRD2Q9GZV1 360 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 KCNQ5Q9NR82 932 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 LEMD3Q9Y2U8 911 aa19.21■□□□□ 0.67
TRIM47-206ENST00000592942 TAF5LO75529 589 aa19.2■□□□□ 0.66
TRIM47-206ENST00000592942 GNAI3P08754 354 aa19.2■□□□□ 0.66
TRIM47-206ENST00000592942 EIF6P56537 245 aaKnown RBP19.2■□□□□ 0.66
TRIM47-206ENST00000592942 PTPN12Q05209 780 aaKnown RBP19.2■□□□□ 0.66
TRIM47-206ENST00000592942 LRRC24Q50LG9 513 aa19.2■□□□□ 0.66
TRIM47-206ENST00000592942 TXNRD3Q86VQ6 643 aa19.2■□□□□ 0.66
TRIM47-206ENST00000592942 L3MBTL3Q96JM7 780 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-206ENST00000592942 ZC3H12CQ9C0D7 883 aaKnown RBP19.2■□□□□ 0.66
TRIM47-206ENST00000592942 DBNDD1Q9H9R9 158 aa19.2■□□□□ 0.66
TRIM47-206ENST00000592942 IRS2Q9Y4H2 1338 aa19.2■□□□□ 0.66
TRIM47-206ENST00000592942 VEGFAP15692 232 aaPredicted RBP19.19■□□□□ 0.66
TRIM47-206ENST00000592942 TAF7LQ5H9L4 462 aa19.19■□□□□ 0.66
TRIM47-206ENST00000592942 GPC2Q8N158 579 aa19.19■□□□□ 0.66
TRIM47-206ENST00000592942 WDR90Q96KV7 1748 aa19.19■□□□□ 0.66
TRIM47-206ENST00000592942 KLRK1P26718 216 aa19.18■□□□□ 0.66
TRIM47-206ENST00000592942 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
TRIM47-206ENST00000592942 CNNM1Q9NRU3 951 aa19.18■□□□□ 0.66
TRIM47-206ENST00000592942 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
TRIM47-206ENST00000592942 ZNF804BA4D1E1 1349 aa19.18■□□□□ 0.66
TRIM47-206ENST00000592942 ECE2O60344 883 aa19.17■□□□□ 0.66
TRIM47-206ENST00000592942 RAD17O75943 681 aa19.17■□□□□ 0.66
TRIM47-206ENST00000592942 MTX1Q13505 466 aa19.17■□□□□ 0.66
TRIM47-206ENST00000592942 GNAI2P04899 355 aa19.16■□□□□ 0.66
TRIM47-206ENST00000592942 GJA3Q9Y6H8 435 aa19.16■□□□□ 0.66
TRIM47-206ENST00000592942 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
TRIM47-206ENST00000592942 SCNN1DP51172 638 aa19.15■□□□□ 0.66
TRIM47-206ENST00000592942 CIAPIN1Q6FI81 312 aa19.15■□□□□ 0.66
TRIM47-206ENST00000592942 C15orf52Q6ZUT6 534 aaKnown RBP19.15■□□□□ 0.66
TRIM47-206ENST00000592942 ATG9AQ7Z3C6 839 aa19.15■□□□□ 0.66
TRIM47-206ENST00000592942 ITPRIPQ8IWB1 547 aa19.15■□□□□ 0.66
TRIM47-206ENST00000592942 VGLL2Q8N8G2 317 aa19.15■□□□□ 0.66
TRIM47-206ENST00000592942 SCN9AQ15858 1988 aa19.14■□□□□ 0.65
TRIM47-206ENST00000592942 EYA2O00167 538 aa19.14■□□□□ 0.65
TRIM47-206ENST00000592942 TOMM70O94826 608 aa19.14■□□□□ 0.65
TRIM47-206ENST00000592942 C20orf194Q5TEA3 1177 aa19.14■□□□□ 0.65
TRIM47-206ENST00000592942 COPRSQ9NQ92 184 aa19.14■□□□□ 0.65
TRIM47-206ENST00000592942 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
TRIM47-206ENST00000592942 A0A1B0GUL6 1792 aa19.14■□□□□ 0.65
TRIM47-206ENST00000592942 PNMA6EA0A0J9YXQ4 647 aa19.13■□□□□ 0.65
TRIM47-206ENST00000592942 PSMD14O00487 310 aa19.13■□□□□ 0.65
TRIM47-206ENST00000592942 MS4A1P11836 297 aa19.13■□□□□ 0.65
TRIM47-206ENST00000592942 PODNQ7Z5L7 613 aa19.13■□□□□ 0.65
TRIM47-206ENST00000592942 TAF1DQ9H5J8 278 aaPredicted RBP19.13■□□□□ 0.65
TRIM47-206ENST00000592942 MROH5Q6ZUA9 1318 aa19.13■□□□□ 0.65
TRIM47-206ENST00000592942 VIL1P09327 827 aaKnown RBP19.12■□□□□ 0.65
TRIM47-206ENST00000592942 EPS15P42566 896 aa19.12■□□□□ 0.65
TRIM47-206ENST00000592942 UBE4AQ14139 1066 aa19.12■□□□□ 0.65
TRIM47-206ENST00000592942 TNIP1Q15025 636 aa19.12■□□□□ 0.65
TRIM47-206ENST00000592942 COA1Q9GZY4 146 aa19.12■□□□□ 0.65
TRIM47-206ENST00000592942 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms