RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.32
APOC1-209ENST00000592885 GGA1Q9UJY5 639 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 XDHP47989 1333 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 PSMD14O00487 310 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 UFL1O94874 794 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 ECE1P42892 770 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 MICALL2Q8IY33 904 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 TNS4Q8IZW8 715 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 ZC3H12CQ9C0D7 883 aaKnown RBP17.01■□□□□ 0.31
APOC1-209ENST00000592885 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
APOC1-209ENST00000592885 SCN9AQ15858 1988 aa17■□□□□ 0.31
APOC1-209ENST00000592885 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
APOC1-209ENST00000592885 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
APOC1-209ENST00000592885 RIMBP2O15034 1052 aa17■□□□□ 0.31
APOC1-209ENST00000592885 SLC4A2P04920 1241 aa17■□□□□ 0.31
APOC1-209ENST00000592885 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
APOC1-209ENST00000592885 TLL2Q9Y6L7 1015 aa17■□□□□ 0.31
APOC1-209ENST00000592885 TRAF5O00463 557 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 CTCFP49711 727 aaPredicted RBP16.99■□□□□ 0.31
APOC1-209ENST00000592885 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
APOC1-209ENST00000592885 FLIIQ13045 1269 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
APOC1-209ENST00000592885 FOXN1O15353 648 aa16.98■□□□□ 0.31
APOC1-209ENST00000592885 ATP2B4P23634 1241 aa16.98■□□□□ 0.31
APOC1-209ENST00000592885 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
APOC1-209ENST00000592885 CST9Q5W186 159 aa16.98■□□□□ 0.31
APOC1-209ENST00000592885 G2E3Q7L622 706 aa16.98■□□□□ 0.31
APOC1-209ENST00000592885 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
APOC1-209ENST00000592885 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
APOC1-209ENST00000592885 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
APOC1-209ENST00000592885 G3V3G9 751 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 H7C1W4 665 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
APOC1-209ENST00000592885 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.31
APOC1-209ENST00000592885 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
APOC1-209ENST00000592885 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
APOC1-209ENST00000592885 DCAF8Q5TAQ9 597 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
APOC1-209ENST00000592885 CAPNS2Q96L46 248 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 GLIS2Q9BZE0 524 aaPredicted RBP16.97■□□□□ 0.31
APOC1-209ENST00000592885 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
APOC1-209ENST00000592885 MED23Q9ULK4 1368 aa16.97■□□□□ 0.31
APOC1-209ENST00000592885 CELF2O95319 508 aaKnown RBP16.96■□□□□ 0.31
APOC1-209ENST00000592885 GCKRQ14397 625 aa16.96■□□□□ 0.31
APOC1-209ENST00000592885 SAPCD2Q86UD0 394 aa16.96■□□□□ 0.31
APOC1-209ENST00000592885 LINS1Q8NG48 757 aa16.96■□□□□ 0.31
APOC1-209ENST00000592885 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
APOC1-209ENST00000592885 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
APOC1-209ENST00000592885 SHTN1A0MZ66 631 aa16.95■□□□□ 0.3
APOC1-209ENST00000592885 VAMP4O75379 141 aa16.95■□□□□ 0.3
APOC1-209ENST00000592885 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
APOC1-209ENST00000592885 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
APOC1-209ENST00000592885 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
APOC1-209ENST00000592885 GREM2Q9H772 168 aa16.95■□□□□ 0.3
APOC1-209ENST00000592885 ZNF646O15015 1829 aaPredicted RBP16.94■□□□□ 0.3
APOC1-209ENST00000592885 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
APOC1-209ENST00000592885 TBC1D10BQ4KMP7 808 aaPredicted RBP16.94■□□□□ 0.3
APOC1-209ENST00000592885 SAMD7Q7Z3H4 446 aa16.94■□□□□ 0.3
APOC1-209ENST00000592885 PODNQ7Z5L7 613 aa16.94■□□□□ 0.3
APOC1-209ENST00000592885 MAP2K2P36507 400 aa16.93■□□□□ 0.3
APOC1-209ENST00000592885 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
APOC1-209ENST00000592885 CASP7P55210 303 aa16.93■□□□□ 0.3
APOC1-209ENST00000592885 EXOSC9Q06265 439 aaKnown RBP16.93■□□□□ 0.3
APOC1-209ENST00000592885 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
APOC1-209ENST00000592885 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
APOC1-209ENST00000592885 KCNQ5Q9NR82 932 aa16.93■□□□□ 0.3
APOC1-209ENST00000592885 MINPP1Q9UNW1 487 aa16.93■□□□□ 0.3
APOC1-209ENST00000592885 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
APOC1-209ENST00000592885 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
APOC1-209ENST00000592885 LEMD3Q9Y2U8 911 aa16.92■□□□□ 0.3
APOC1-209ENST00000592885 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
APOC1-209ENST00000592885 USP17L3A6NCW0 530 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 USP17L4A6NCW7 530 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 CSF1RP07333 972 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 HSPA8P11142 646 aaKnown RBP16.91■□□□□ 0.3
APOC1-209ENST00000592885 ITGA6P23229 1130 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 CCT4P50991 539 aaKnown RBP16.91■□□□□ 0.3
APOC1-209ENST00000592885 USP17L1Q7RTZ2 530 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 KRT26Q7Z3Y9 468 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 ANKRD2Q9GZV1 360 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
APOC1-209ENST00000592885 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
APOC1-209ENST00000592885 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
APOC1-209ENST00000592885 EGFRP00533 1210 aa16.9■□□□□ 0.3
APOC1-209ENST00000592885 GMLQ99445 158 aa16.9■□□□□ 0.3
APOC1-209ENST00000592885 COA1Q9GZY4 146 aa16.9■□□□□ 0.3
APOC1-209ENST00000592885 CA12O43570 354 aa16.89■□□□□ 0.29
APOC1-209ENST00000592885 MMP14P50281 582 aa16.89■□□□□ 0.29
APOC1-209ENST00000592885 LBX1P52954 281 aa16.89■□□□□ 0.29
APOC1-209ENST00000592885 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms