RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 C21orf2O43822 256 aa21.49■■□□□ 1.03
AP3D1-211ENST00000591650 HMMRO75330 724 aa21.49■■□□□ 1.03
AP3D1-211ENST00000591650 LDHAL6AQ6ZMR3 332 aa21.49■■□□□ 1.03
AP3D1-211ENST00000591650 EYA2O00167 538 aa21.48■■□□□ 1.03
AP3D1-211ENST00000591650 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
AP3D1-211ENST00000591650 TMC4Q7Z404 712 aa21.48■■□□□ 1.03
AP3D1-211ENST00000591650 CNNM1Q9NRU3 951 aa21.48■■□□□ 1.03
AP3D1-211ENST00000591650 ARAP2Q8WZ64 1704 aa21.48■■□□□ 1.03
AP3D1-211ENST00000591650 UTRNP46939 3433 aa21.48■■□□□ 1.03
AP3D1-211ENST00000591650 SP8Q8IXZ3 490 aa21.47■■□□□ 1.03
AP3D1-211ENST00000591650 EXOC6BQ9Y2D4 811 aa21.47■■□□□ 1.03
AP3D1-211ENST00000591650 MINPP1Q9UNW1 487 aa21.46■■□□□ 1.03
AP3D1-211ENST00000591650 RIPOR2Q9Y4F9 1068 aa21.46■■□□□ 1.03
AP3D1-211ENST00000591650 SURF6O75683 361 aaKnown RBP21.46■■□□□ 1.03
AP3D1-211ENST00000591650 CIAO1O76071 339 aa21.46■■□□□ 1.03
AP3D1-211ENST00000591650 CHRNDQ07001 517 aa21.46■■□□□ 1.03
AP3D1-211ENST00000591650 NOP58Q9Y2X3 529 aaKnown RBP21.46■■□□□ 1.03
AP3D1-211ENST00000591650 GPSM2P81274 684 aa21.45■■□□□ 1.02
AP3D1-211ENST00000591650 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
AP3D1-211ENST00000591650 CCDC93Q567U6 631 aa21.45■■□□□ 1.02
AP3D1-211ENST00000591650 FBXO3Q9UK99 471 aa21.45■■□□□ 1.02
AP3D1-211ENST00000591650 CCDC88AQ3V6T2 1871 aa21.44■■□□□ 1.02
AP3D1-211ENST00000591650 VGLL2Q8N8G2 317 aa21.44■■□□□ 1.02
AP3D1-211ENST00000591650 HELBQ8NG08 1087 aaPredicted RBP21.44■■□□□ 1.02
AP3D1-211ENST00000591650 MROH5Q6ZUA9 1318 aa21.43■■□□□ 1.02
AP3D1-211ENST00000591650 IL15P40933 162 aaPredicted RBP21.43■■□□□ 1.02
AP3D1-211ENST00000591650 METTL24Q5JXM2 366 aa21.43■■□□□ 1.02
AP3D1-211ENST00000591650 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
AP3D1-211ENST00000591650 ZNF609O15014 1411 aa21.42■■□□□ 1.02
AP3D1-211ENST00000591650 SBF1O95248 1867 aa21.42■■□□□ 1.02
AP3D1-211ENST00000591650 XDHP47989 1333 aa21.42■■□□□ 1.02
AP3D1-211ENST00000591650 WTIPA6NIX2 430 aaPredicted RBP21.42■■□□□ 1.02
AP3D1-211ENST00000591650 TAF5LO75529 589 aa21.42■■□□□ 1.02
AP3D1-211ENST00000591650 IGHDP01880 384 aa21.42■■□□□ 1.02
AP3D1-211ENST00000591650 G3BP1Q13283 466 aaKnown RBP eCLIP21.42■■□□□ 1.02
AP3D1-211ENST00000591650 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
AP3D1-211ENST00000591650 SOGA3Q5TF21 947 aa21.42■■□□□ 1.02
AP3D1-211ENST00000591650 SNAP23O00161 211 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 GRIN3BO60391 1043 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 SASH1O94885 1247 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 CC2D2BQ6DHV5 1058 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 ARHGAP27Q6ZUM4 889 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 PODXL2Q9NZ53 605 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 ANKIB1Q9P2G1 1089 aa21.41■■□□□ 1.02
AP3D1-211ENST00000591650 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
AP3D1-211ENST00000591650 APBB1O00213 710 aa21.4■■□□□ 1.02
AP3D1-211ENST00000591650 NFKBIEO00221 500 aa21.4■■□□□ 1.02
AP3D1-211ENST00000591650 TFCP2Q12800 502 aa21.4■■□□□ 1.02
AP3D1-211ENST00000591650 DPP8Q6V1X1 898 aaPredicted RBP21.4■■□□□ 1.02
AP3D1-211ENST00000591650 MPNDQ8N594 471 aa21.4■■□□□ 1.02
AP3D1-211ENST00000591650 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
AP3D1-211ENST00000591650 ANKRD2Q9GZV1 360 aa21.4■■□□□ 1.02
AP3D1-211ENST00000591650 TMX4Q9H1E5 349 aaPredicted RBP21.4■■□□□ 1.02
AP3D1-211ENST00000591650 DCTPP1Q9H773 170 aa21.4■■□□□ 1.02
AP3D1-211ENST00000591650 TIAM2Q8IVF5 1701 aa21.39■■□□□ 1.02
AP3D1-211ENST00000591650 UFL1O94874 794 aa21.39■■□□□ 1.02
AP3D1-211ENST00000591650 RASSF7Q02833 373 aa21.39■■□□□ 1.02
AP3D1-211ENST00000591650 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.02
AP3D1-211ENST00000591650 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.01
AP3D1-211ENST00000591650 COL4A5P29400 1685 aa21.39■■□□□ 1.01
AP3D1-211ENST00000591650 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 TBC1D16Q8TBP0 767 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 POLLQ9UGP5 575 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 GGA1Q9UJY5 639 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 PDE8BO95263 885 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 PRELPP51888 382 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 CEP126Q9P2H0 1117 aa21.38■■□□□ 1.01
AP3D1-211ENST00000591650 KLRK1P26718 216 aa21.37■■□□□ 1.01
AP3D1-211ENST00000591650 FKBP4Q02790 459 aaKnown RBP eCLIP21.37■■□□□ 1.01
AP3D1-211ENST00000591650 HSP90AB4PQ58FF6 505 aa21.37■■□□□ 1.01
AP3D1-211ENST00000591650 ERC1Q8IUD2 1116 aa21.37■■□□□ 1.01
AP3D1-211ENST00000591650 RHPN1Q8TCX5 695 aa21.37■■□□□ 1.01
AP3D1-211ENST00000591650 PSMD1Q99460 953 aa21.37■■□□□ 1.01
AP3D1-211ENST00000591650 RTFDC1Q9BY42 306 aaPredicted RBP21.37■■□□□ 1.01
AP3D1-211ENST00000591650 TAOK3Q9H2K8 898 aa21.37■■□□□ 1.01
AP3D1-211ENST00000591650 MYH13Q9UKX3 1938 aa21.36■■□□□ 1.01
AP3D1-211ENST00000591650 ZNF804BA4D1E1 1349 aa21.36■■□□□ 1.01
AP3D1-211ENST00000591650 KCNJ4P48050 445 aa21.36■■□□□ 1.01
AP3D1-211ENST00000591650 PUM3Q15397 648 aaKnown RBP21.36■■□□□ 1.01
AP3D1-211ENST00000591650 GRIPAP1Q4V328 841 aa21.36■■□□□ 1.01
AP3D1-211ENST00000591650 LTBP3Q9NS15 1303 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 IRS2Q9Y4H2 1338 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 C6orf229H3BNL8 230 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 RAB11FIP3O75154 756 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 FGFR2P21802 821 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 ATP2B4P23634 1241 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 ATP2B3Q16720 1220 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 SMC5Q8IY18 1101 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 IL1RAPL2Q9NP60 686 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
AP3D1-211ENST00000591650 LEMD3Q9Y2U8 911 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 MED23Q9ULK4 1368 aa21.35■■□□□ 1.01
AP3D1-211ENST00000591650 ZNF646O15015 1829 aaPredicted RBP21.34■■□□□ 1.01
AP3D1-211ENST00000591650 SMARCA5O60264 1052 aaPredicted RBP21.34■■□□□ 1.01
AP3D1-211ENST00000591650 GCC1Q96CN9 775 aa21.34■■□□□ 1.01
AP3D1-211ENST00000591650 KIF1BPQ96EK5 621 aa21.34■■□□□ 1.01
AP3D1-211ENST00000591650 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1.01
AP3D1-211ENST00000591650 UBE4AQ14139 1066 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms