RNA–Protein interactions for RNA: ENST00000591648.1

TPGS2-216, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 2

Gene TPGS2, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-216	ENST00000591648	CREBZF	Q9NS37	354 aa		32.86	■■■□□ 2.85
TPGS2-216	ENST00000591648	PODXL2	Q9NZ53	605 aa		32.86	■■■□□ 2.85
TPGS2-216	ENST00000591648	GGA1	Q9UJY5	639 aa		32.86	■■■□□ 2.85
TPGS2-216	ENST00000591648	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.86	■■■□□ 2.85
TPGS2-216	ENST00000591648	CASP7	P55210	303 aa		32.85	■■■□□ 2.85
TPGS2-216	ENST00000591648	CDC5L	Q99459	802 aa	Known RBP	32.85	■■■□□ 2.85
TPGS2-216	ENST00000591648	MKRN1	Q9UHC7	482 aa	Known RBP	32.85	■■■□□ 2.85
TPGS2-216	ENST00000591648	WTIP	A6NIX2	430 aa	Predicted RBP	32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	PSMD14	O00487	310 aa		32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	FMR1	Q06787	632 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	USP50	Q70EL3	339 aa	Predicted RBP	32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	JMY	Q8N9B5	988 aa		32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	ADARB2	Q9NS39	739 aa	Known RBP	32.84	■■■□□ 2.85
TPGS2-216	ENST00000591648	BEND3	Q5T5X7	828 aa		32.83	■■■□□ 2.85
TPGS2-216	ENST00000591648	FAM161A	Q3B820	660 aa		32.81	■■■□□ 2.84
TPGS2-216	ENST00000591648	XDH	P47989	1333 aa		32.8	■■■□□ 2.84
TPGS2-216	ENST00000591648	CACNA1F	O60840	1977 aa		32.8	■■■□□ 2.84
TPGS2-216	ENST00000591648	PLA2G12B	Q9BX93	195 aa		32.8	■■■□□ 2.84
TPGS2-216	ENST00000591648	CNOT7	Q9UIV1	285 aa	Known RBP	32.8	■■■□□ 2.84
TPGS2-216	ENST00000591648	MYH3	P11055	1940 aa		32.8	■■■□□ 2.84
TPGS2-216	ENST00000591648	RTL9	Q8NET4	1388 aa		32.8	■■■□□ 2.84
TPGS2-216	ENST00000591648	SPEF2	Q9C093	1822 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	TMEM88B	A6NKF7	163 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648		G3V3G9	751 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	ITGA6	P23229	1130 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	DCAF8	Q5TAQ9	597 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	SLC4A10	Q6U841	1118 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	TRPM4	Q8TD43	1214 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	CDCA7L	Q96GN5	454 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	BSDC1	Q9NW68	430 aa	Predicted RBP	32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	MINPP1	Q9UNW1	487 aa		32.79	■■■□□ 2.84
TPGS2-216	ENST00000591648	TRAF5	O00463	557 aa		32.78	■■■□□ 2.84
TPGS2-216	ENST00000591648	MICALL2	Q8IY33	904 aa		32.78	■■■□□ 2.84
TPGS2-216	ENST00000591648		E9PSI1	815 aa		32.77	■■■□□ 2.84
TPGS2-216	ENST00000591648	HIRA	P54198	1017 aa	Predicted RBP	32.77	■■■□□ 2.84
TPGS2-216	ENST00000591648	CSF1R	P07333	972 aa		32.75	■■■□□ 2.83
TPGS2-216	ENST00000591648	ATP2B4	P23634	1241 aa		32.75	■■■□□ 2.83
TPGS2-216	ENST00000591648	IGHMBP2	P38935	993 aa	Known RBP	32.75	■■■□□ 2.83
TPGS2-216	ENST00000591648	SLFN5	Q08AF3	891 aa		32.75	■■■□□ 2.83
TPGS2-216	ENST00000591648	CHMP3	Q9Y3E7	222 aa		32.74	■■■□□ 2.83
TPGS2-216	ENST00000591648		H7C1D1	291 aa		32.73	■■■□□ 2.83
TPGS2-216	ENST00000591648	CCER2	I3L3R5	266 aa		32.73	■■■□□ 2.83
TPGS2-216	ENST00000591648	FOXO4	P98177	505 aa		32.73	■■■□□ 2.83
TPGS2-216	ENST00000591648	SAMD7	Q7Z3H4	446 aa		32.73	■■■□□ 2.83
TPGS2-216	ENST00000591648	MRPL50	Q8N5N7	158 aa	Known RBP	32.73	■■■□□ 2.83
TPGS2-216	ENST00000591648	EPHA10	Q5JZY3	1008 aa		32.72	■■■□□ 2.83
TPGS2-216	ENST00000591648	CNTNAP1	P78357	1384 aa		32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	SCN9A	Q15858	1988 aa		32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	EGFR	P00533	1210 aa		32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	CCT4	P50991	539 aa	Known RBP	32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	RBM26	Q5T8P6	1007 aa	Known RBP	32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	DPF2	Q92785	391 aa		32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	MPHOSPH8	Q99549	860 aa		32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.71	■■■□□ 2.83
TPGS2-216	ENST00000591648	GRM8	O00222	908 aa		32.7	■■■□□ 2.83
TPGS2-216	ENST00000591648	SSH1	Q8WYL5	1049 aa		32.7	■■■□□ 2.83
TPGS2-216	ENST00000591648	SRCIN1	Q9C0H9	1055 aa		32.7	■■■□□ 2.83
TPGS2-216	ENST00000591648	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.7	■■■□□ 2.83
TPGS2-216	ENST00000591648	ABT1	Q9ULW3	272 aa	Known RBP	32.69	■■■□□ 2.82
TPGS2-216	ENST00000591648	ANKRD18B	A2A2Z9	1011 aa		32.68	■■■□□ 2.82
TPGS2-216	ENST00000591648	VIL1	P09327	827 aa	Known RBP	32.68	■■■□□ 2.82
TPGS2-216	ENST00000591648	LMBR1L	Q6UX01	489 aa		32.68	■■■□□ 2.82
TPGS2-216	ENST00000591648	HSPA1A	P0DMV8	641 aa	Known RBP	32.67	■■■□□ 2.82
TPGS2-216	ENST00000591648	HSPA1B	P0DMV9	641 aa	Known RBP	32.67	■■■□□ 2.82
TPGS2-216	ENST00000591648	RPS12	P25398	132 aa	Known RBP	32.67	■■■□□ 2.82
TPGS2-216	ENST00000591648	KLRK1	P26718	216 aa		32.67	■■■□□ 2.82
TPGS2-216	ENST00000591648	VEGFB	P49765	207 aa		32.67	■■■□□ 2.82
TPGS2-216	ENST00000591648	TXNRD3	Q86VQ6	643 aa		32.67	■■■□□ 2.82
TPGS2-216	ENST00000591648	ALDH1L1	O75891	902 aa		32.66	■■■□□ 2.82
TPGS2-216	ENST00000591648	IFIT5	Q13325	482 aa	Known RBP	32.66	■■■□□ 2.82
TPGS2-216	ENST00000591648	CST9	Q5W186	159 aa		32.66	■■■□□ 2.82
TPGS2-216	ENST00000591648	DLK2	Q6UY11	383 aa		32.66	■■■□□ 2.82
TPGS2-216	ENST00000591648	PGAP2	Q9UHJ9	254 aa		32.66	■■■□□ 2.82
TPGS2-216	ENST00000591648	MED23	Q9ULK4	1368 aa		32.66	■■■□□ 2.82
TPGS2-216	ENST00000591648	CHRND	Q07001	517 aa		32.65	■■■□□ 2.82
TPGS2-216	ENST00000591648	ZNF594	Q96JF6	807 aa	Predicted RBP	32.65	■■■□□ 2.82
TPGS2-216	ENST00000591648	SNAP23	O00161	211 aa		32.64	■■■□□ 2.82
TPGS2-216	ENST00000591648	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.64	■■■□□ 2.82
TPGS2-216	ENST00000591648	HELB	Q8NG08	1087 aa	Predicted RBP	32.64	■■■□□ 2.82
TPGS2-216	ENST00000591648	SUCLG2	Q96I99	432 aa		32.64	■■■□□ 2.82
TPGS2-216	ENST00000591648	ZNF804B	A4D1E1	1349 aa		32.63	■■■□□ 2.81
TPGS2-216	ENST00000591648	ZC3H15	Q8WU90	426 aa	Known RBP	32.63	■■■□□ 2.81
TPGS2-216	ENST00000591648	FBXW7	Q969H0	707 aa		32.63	■■■□□ 2.81
TPGS2-216	ENST00000591648	ANKRD2	Q9GZV1	360 aa		32.63	■■■□□ 2.81
TPGS2-216	ENST00000591648	ZNF408	Q9H9D4	720 aa		32.63	■■■□□ 2.81
TPGS2-216	ENST00000591648	TAF5L	O75529	589 aa		32.62	■■■□□ 2.81
TPGS2-216	ENST00000591648	DEFB115	Q30KQ5	88 aa		32.62	■■■□□ 2.81
TPGS2-216	ENST00000591648	USP48	Q86UV5	1035 aa		32.62	■■■□□ 2.81
TPGS2-216	ENST00000591648	MXD3	Q9BW11	206 aa		32.62	■■■□□ 2.81
TPGS2-216	ENST00000591648	LEMD3	Q9Y2U8	911 aa		32.62	■■■□□ 2.81
TPGS2-216	ENST00000591648	RASSF10	A6NK89	507 aa		32.61	■■■□□ 2.81
TPGS2-216	ENST00000591648	CELF2	O95319	508 aa	Known RBP	32.61	■■■□□ 2.81
TPGS2-216	ENST00000591648	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.61	■■■□□ 2.81
TPGS2-216	ENST00000591648	KCNJ4	P48050	445 aa		32.61	■■■□□ 2.81
TPGS2-216	ENST00000591648	PODN	Q7Z5L7	613 aa		32.61	■■■□□ 2.81
TPGS2-216	ENST00000591648	USP17L3	A6NCW0	530 aa		32.6	■■■□□ 2.81
TPGS2-216	ENST00000591648	USP17L4	A6NCW7	530 aa		32.6	■■■□□ 2.81
TPGS2-216	ENST00000591648	KIF4B	Q2VIQ3	1234 aa		32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms