RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
DNMT1-223ENST00000591239 GPC2Q8N158 579 aa11.61□□□□□ -0.55
DNMT1-223ENST00000591239 TBC1D16Q8TBP0 767 aa11.61□□□□□ -0.55
DNMT1-223ENST00000591239 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
DNMT1-223ENST00000591239 ZNRF3Q9ULT6 936 aa11.61□□□□□ -0.55
DNMT1-223ENST00000591239 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
DNMT1-223ENST00000591239 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 UFL1O94874 794 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 IGHMBP2P38935 993 aaKnown RBP11.6□□□□□ -0.55
DNMT1-223ENST00000591239 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
DNMT1-223ENST00000591239 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
DNMT1-223ENST00000591239 SUCLG2Q96I99 432 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 EYA3Q99504 573 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 MPHOSPH8Q99549 860 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 CHMP3Q9Y3E7 222 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 XDHP47989 1333 aa11.6□□□□□ -0.55
DNMT1-223ENST00000591239 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
DNMT1-223ENST00000591239 RIMBP2O15034 1052 aa11.59□□□□□ -0.55
DNMT1-223ENST00000591239 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
DNMT1-223ENST00000591239 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
DNMT1-223ENST00000591239 ARHGAP45Q92619 1136 aa11.59□□□□□ -0.55
DNMT1-223ENST00000591239 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
DNMT1-223ENST00000591239 GPR101Q96P66 508 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-223ENST00000591239 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
DNMT1-223ENST00000591239 ZC3H12CQ9C0D7 883 aaKnown RBP11.59□□□□□ -0.55
DNMT1-223ENST00000591239 USP44Q9H0E7 712 aa11.59□□□□□ -0.55
DNMT1-223ENST00000591239 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-223ENST00000591239 YDJCA8MPS7 323 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 BCAR3O75815 825 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 RAD17O75943 681 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 ATP2B4P23634 1241 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 CXCL9Q07325 125 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 FSTL1Q12841 308 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-223ENST00000591239 BICC1Q9H694 974 aaKnown RBP11.58□□□□□ -0.56
DNMT1-223ENST00000591239 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
DNMT1-223ENST00000591239 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
DNMT1-223ENST00000591239 TNIP1Q15025 636 aa11.57□□□□□ -0.56
DNMT1-223ENST00000591239 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
DNMT1-223ENST00000591239 CIAPIN1Q6FI81 312 aa11.57□□□□□ -0.56
DNMT1-223ENST00000591239 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
DNMT1-223ENST00000591239 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
DNMT1-223ENST00000591239 DBNDD1Q9H9R9 158 aa11.57□□□□□ -0.56
DNMT1-223ENST00000591239 SPEF2Q9C093 1822 aa11.57□□□□□ -0.56
DNMT1-223ENST00000591239 SCN4AP35499 1836 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 G3V3G9 751 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 ECE2O60344 883 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 HSPA6P17066 643 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 EPHX2P34913 555 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 SCNN1DP51172 638 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 CHRNDQ07001 517 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
DNMT1-223ENST00000591239 TAF7LQ5H9L4 462 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 ZNF594Q96JF6 807 aaPredicted RBP11.56□□□□□ -0.56
DNMT1-223ENST00000591239 ANKRD2Q9GZV1 360 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 LEMD3Q9Y2U8 911 aa11.56□□□□□ -0.56
DNMT1-223ENST00000591239 TRIM27P14373 513 aa11.55□□□□□ -0.56
DNMT1-223ENST00000591239 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-223ENST00000591239 EPS15P42566 896 aa11.55□□□□□ -0.56
DNMT1-223ENST00000591239 EAPPQ56P03 285 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-223ENST00000591239 INTS3Q68E01 1043 aaKnown RBP11.55□□□□□ -0.56
DNMT1-223ENST00000591239 ATF7IPQ6VMQ6 1270 aa11.55□□□□□ -0.56
DNMT1-223ENST00000591239 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-223ENST00000591239 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
DNMT1-223ENST00000591239 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
DNMT1-223ENST00000591239 GPRC5DQ9NZD1 345 aa11.55□□□□□ -0.56
DNMT1-223ENST00000591239 PSMD14O00487 310 aa11.54□□□□□ -0.56
DNMT1-223ENST00000591239 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-223ENST00000591239 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-223ENST00000591239 LDHDQ86WU2 507 aa11.54□□□□□ -0.56
DNMT1-223ENST00000591239 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-223ENST00000591239 CNNM1Q9NRU3 951 aa11.54□□□□□ -0.56
DNMT1-223ENST00000591239 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
DNMT1-223ENST00000591239 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
DNMT1-223ENST00000591239 SNAP23O00161 211 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 TAF5LO75529 589 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 KCNJ4P48050 445 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 ZKSCAN2Q63HK3 967 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 TXNRD3Q86VQ6 643 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 MEIS3Q99687 375 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
DNMT1-223ENST00000591239 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-223ENST00000591239 PLIN1O60240 522 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.57
DNMT1-223ENST00000591239 USP50Q70EL3 339 aaPredicted RBP11.52□□□□□ -0.57
DNMT1-223ENST00000591239 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 DPF2Q92785 391 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
DNMT1-223ENST00000591239 ADARB2Q9NS39 739 aaKnown RBP11.52□□□□□ -0.57
DNMT1-223ENST00000591239 CNOT7Q9UIV1 285 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms