RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 LOC102724428A0A0B4J2F2 783 aa24.35■■□□□ 1.49
GCDH-214ENST00000591043 ATP6V1AP38606 617 aa24.35■■□□□ 1.49
GCDH-214ENST00000591043 SIK1P57059 783 aa24.35■■□□□ 1.49
GCDH-214ENST00000591043 PARP10Q53GL7 1025 aa24.35■■□□□ 1.49
GCDH-214ENST00000591043 ZFYP08048 801 aaPredicted RBP24.34■■□□□ 1.49
GCDH-214ENST00000591043 GPTP24298 496 aa24.34■■□□□ 1.49
GCDH-214ENST00000591043 GORABQ5T7V8 394 aa24.34■■□□□ 1.49
GCDH-214ENST00000591043 BLOC1S2Q6QNY1 142 aa24.34■■□□□ 1.49
GCDH-214ENST00000591043 NOL8Q76FK4 1167 aaKnown RBP24.34■■□□□ 1.49
GCDH-214ENST00000591043 LAMB2P55268 1798 aa24.34■■□□□ 1.49
GCDH-214ENST00000591043 FSD2A1L4K1 749 aa24.34■■□□□ 1.49
GCDH-214ENST00000591043 MCTP1Q6DN14 999 aa24.34■■□□□ 1.49
GCDH-214ENST00000591043 INTS5Q6P9B9 1019 aaKnown RBP24.34■■□□□ 1.49
GCDH-214ENST00000591043 ZNF589Q86UQ0 364 aaPredicted RBP24.34■■□□□ 1.49
GCDH-214ENST00000591043 EDC3Q96F86 508 aaKnown RBP24.34■■□□□ 1.49
GCDH-214ENST00000591043 PUS3Q9BZE2 481 aaKnown RBP24.34■■□□□ 1.49
GCDH-214ENST00000591043 LRP5O75197 1615 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 GOLIM4O00461 696 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 RGL2O15211 777 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 ITGA6P23229 1130 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 PKP1Q13835 747 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 VPS72Q15906 364 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 ADCK5Q3MIX3 580 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 TTC39AQ5SRH9 613 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 DDX46Q7L014 1031 aaKnown RBP24.33■■□□□ 1.49
GCDH-214ENST00000591043 DSCC1Q9BVC3 393 aa24.33■■□□□ 1.49
GCDH-214ENST00000591043 CRKLP46109 303 aaKnown RBP24.32■■□□□ 1.48
GCDH-214ENST00000591043 ZNF512BQ96KM6 892 aaPredicted RBP24.32■■□□□ 1.48
GCDH-214ENST00000591043 RIPOR2Q9Y4F9 1068 aa24.32■■□□□ 1.48
GCDH-214ENST00000591043 MYH7P12883 1935 aa24.32■■□□□ 1.48
GCDH-214ENST00000591043 ZMYM1Q5SVZ6 1142 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 LDHAL6AQ6ZMR3 332 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 SMC3Q9UQE7 1217 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 DDX49Q9Y6V7 483 aaKnown RBP24.31■■□□□ 1.48
GCDH-214ENST00000591043 RIC1Q4ADV7 1423 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 BCORQ6W2J9 1755 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 RPS6KB1P23443 525 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 XAGE2Q96GT9 111 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 TBC1D2BQ9UPU7 963 aa24.31■■□□□ 1.48
GCDH-214ENST00000591043 RNF113AO15541 343 aaKnown RBP24.3■■□□□ 1.48
GCDH-214ENST00000591043 HMGB1P09429 215 aaKnown RBP24.3■■□□□ 1.48
GCDH-214ENST00000591043 ATP2B3Q16720 1220 aa24.3■■□□□ 1.48
GCDH-214ENST00000591043 METTL24Q5JXM2 366 aa24.3■■□□□ 1.48
GCDH-214ENST00000591043 ARAP2Q8WZ64 1704 aa24.3■■□□□ 1.48
GCDH-214ENST00000591043 LMBRD1Q9NUN5 540 aa24.3■■□□□ 1.48
GCDH-214ENST00000591043 ZNF652Q9Y2D9 606 aa24.3■■□□□ 1.48
GCDH-214ENST00000591043 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
GCDH-214ENST00000591043 GZF1Q9H116 711 aaPredicted RBP24.29■■□□□ 1.48
GCDH-214ENST00000591043 GREM2Q9H772 168 aa24.29■■□□□ 1.48
GCDH-214ENST00000591043 CNNM1Q9NRU3 951 aa24.29■■□□□ 1.48
GCDH-214ENST00000591043 ACSBG1Q96GR2 724 aa24.29■■□□□ 1.48
GCDH-214ENST00000591043 ATP6V1DQ9Y5K8 247 aa24.29■■□□□ 1.48
GCDH-214ENST00000591043 UBN2Q6ZU65 1347 aa24.28■■□□□ 1.48
GCDH-214ENST00000591043 MROH5Q6ZUA9 1318 aa24.28■■□□□ 1.48
GCDH-214ENST00000591043 MYH14Q7Z406 1995 aaKnown RBP24.28■■□□□ 1.48
GCDH-214ENST00000591043 MRE11P49959 708 aa24.28■■□□□ 1.48
GCDH-214ENST00000591043 UTP14AQ9BVJ6 771 aaKnown RBP24.28■■□□□ 1.48
GCDH-214ENST00000591043 RTL9Q8NET4 1388 aa24.28■■□□□ 1.48
GCDH-214ENST00000591043 MBD3O95983 291 aa24.27■■□□□ 1.48
GCDH-214ENST00000591043 ZSCAN25Q6NSZ9 544 aa24.26■■□□□ 1.47
GCDH-214ENST00000591043 NEK1Q96PY6 1258 aa24.26■■□□□ 1.47
GCDH-214ENST00000591043 CAMTA2O94983 1202 aa24.26■■□□□ 1.47
GCDH-214ENST00000591043 TTF1Q15361 905 aaPredicted RBP24.26■■□□□ 1.47
GCDH-214ENST00000591043 SPATA31A6Q5VVP1 1343 aa24.25■■□□□ 1.47
GCDH-214ENST00000591043 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
GCDH-214ENST00000591043 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
GCDH-214ENST00000591043 A0A0G2JS52 829 aa24.25■■□□□ 1.47
GCDH-214ENST00000591043 CLEC4GQ6UXB4 293 aa24.25■■□□□ 1.47
GCDH-214ENST00000591043 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.25■■□□□ 1.47
GCDH-214ENST00000591043 BRPF3Q9ULD4 1205 aa24.25■■□□□ 1.47
GCDH-214ENST00000591043 NDUFB9Q9Y6M9 179 aa24.25■■□□□ 1.47
GCDH-214ENST00000591043 PDE8BO95263 885 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 ITPK1Q13572 414 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 FNBP4Q8N3X1 1017 aaPredicted RBP24.24■■□□□ 1.47
GCDH-214ENST00000591043 NGLY1Q96IV0 654 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 UQCRFS1P1P0C7P4 283 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 CPA1P15085 419 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 PDCP20941 246 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 VGLL2Q8N8G2 317 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 CHMP4CQ96CF2 233 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 CTNNA3Q9UI47 895 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 AKAP11Q9UKA4 1901 aa24.24■■□□□ 1.47
GCDH-214ENST00000591043 STX6O43752 255 aa24.23■■□□□ 1.47
GCDH-214ENST00000591043 ZSCAN22P10073 491 aaPredicted RBP24.23■■□□□ 1.47
GCDH-214ENST00000591043 SYNE4Q8N205 404 aa24.23■■□□□ 1.47
GCDH-214ENST00000591043 CCDC85AQ96PX6 553 aaPredicted RBP24.23■■□□□ 1.47
GCDH-214ENST00000591043 LAMA4Q16363 1823 aa24.22■■□□□ 1.47
GCDH-214ENST00000591043 ADORA1P30542 326 aa24.22■■□□□ 1.47
GCDH-214ENST00000591043 FKBP4Q02790 459 aaKnown RBP eCLIP24.22■■□□□ 1.47
GCDH-214ENST00000591043 PUM3Q15397 648 aaKnown RBP24.22■■□□□ 1.47
GCDH-214ENST00000591043 CCDC152Q4G0S7 254 aa24.22■■□□□ 1.47
GCDH-214ENST00000591043 SUSD4Q5VX71 490 aa24.22■■□□□ 1.47
GCDH-214ENST00000591043 CCDC83Q8IWF9 413 aa24.22■■□□□ 1.47
GCDH-214ENST00000591043 SEC62Q99442 399 aaKnown RBP24.22■■□□□ 1.47
GCDH-214ENST00000591043 PRPF40AO75400 957 aaKnown RBP24.21■■□□□ 1.47
GCDH-214ENST00000591043 ME3Q16798 604 aa24.21■■□□□ 1.47
GCDH-214ENST00000591043 MAST3O60307 1309 aa24.21■■□□□ 1.47
GCDH-214ENST00000591043 CNTNAP4Q9C0A0 1308 aa24.21■■□□□ 1.47
GCDH-214ENST00000591043 FAM98CQ17RN3 349 aaKnown RBP24.21■■□□□ 1.47
GCDH-214ENST00000591043 CCDC129Q6ZRS4 1044 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms