RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CNTNAP1P78357 1384 aa21.61■■□□□ 1.05
CROCCP3-203ENST00000589964 ECE2O60344 883 aa21.6■■□□□ 1.05
CROCCP3-203ENST00000589964 UFL1O94874 794 aa21.6■■□□□ 1.05
CROCCP3-203ENST00000589964 FKBP5Q13451 457 aaPredicted RBP21.6■■□□□ 1.05
CROCCP3-203ENST00000589964 GCKRQ14397 625 aa21.6■■□□□ 1.05
CROCCP3-203ENST00000589964 CCDC152Q4G0S7 254 aa21.6■■□□□ 1.05
CROCCP3-203ENST00000589964 HSPA1AP0DMV8 641 aaKnown RBP21.59■■□□□ 1.05
CROCCP3-203ENST00000589964 HSPA1BP0DMV9 641 aaKnown RBP21.59■■□□□ 1.05
CROCCP3-203ENST00000589964 COL13A1Q5TAT6 717 aaPredicted RBP21.59■■□□□ 1.05
CROCCP3-203ENST00000589964 DNAAF4Q8WXU2 420 aa21.59■■□□□ 1.05
CROCCP3-203ENST00000589964 TMEM88BA6NKF7 163 aa21.58■■□□□ 1.05
CROCCP3-203ENST00000589964 FAM161AQ3B820 660 aa21.58■■□□□ 1.05
CROCCP3-203ENST00000589964 PODXL2Q9NZ53 605 aa21.58■■□□□ 1.05
CROCCP3-203ENST00000589964 MYH3P11055 1940 aa21.57■■□□□ 1.04
CROCCP3-203ENST00000589964 VEGFBP49765 207 aa21.57■■□□□ 1.04
CROCCP3-203ENST00000589964 CST9Q5W186 159 aa21.57■■□□□ 1.04
CROCCP3-203ENST00000589964 MICALL2Q8IY33 904 aa21.57■■□□□ 1.04
CROCCP3-203ENST00000589964 GLIS2Q9BZE0 524 aaPredicted RBP21.57■■□□□ 1.04
CROCCP3-203ENST00000589964 ADARB2Q9NS39 739 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-203ENST00000589964 ASTN2O75129 1339 aaPredicted RBP21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 KLRK1P26718 216 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 NEXNQ0ZGT2 675 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 EPHA10Q5JZY3 1008 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 USP50Q70EL3 339 aaPredicted RBP21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 SAMD7Q7Z3H4 446 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 ANKRD18AQ8IVF6 992 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 ANKIB1Q9P2G1 1089 aa21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 CNOT7Q9UIV1 285 aaKnown RBP21.56■■□□□ 1.04
CROCCP3-203ENST00000589964 GGA1Q9UJY5 639 aa21.55■■□□□ 1.04
CROCCP3-203ENST00000589964 SNAP23O00161 211 aa21.54■■□□□ 1.04
CROCCP3-203ENST00000589964 TNIP1Q15025 636 aa21.54■■□□□ 1.04
CROCCP3-203ENST00000589964 BEND3Q5T5X7 828 aa21.54■■□□□ 1.04
CROCCP3-203ENST00000589964 TXNRD3Q86VQ6 643 aa21.54■■□□□ 1.04
CROCCP3-203ENST00000589964 LINS1Q8NG48 757 aa21.54■■□□□ 1.04
CROCCP3-203ENST00000589964 MINPP1Q9UNW1 487 aa21.54■■□□□ 1.04
CROCCP3-203ENST00000589964 ZNF646O15015 1829 aaPredicted RBP21.53■■□□□ 1.04
CROCCP3-203ENST00000589964 TBC1D10BQ4KMP7 808 aaPredicted RBP21.53■■□□□ 1.04
CROCCP3-203ENST00000589964 IFFO2Q5TF58 517 aa21.53■■□□□ 1.04
CROCCP3-203ENST00000589964 MXD3Q9BW11 206 aa21.53■■□□□ 1.04
CROCCP3-203ENST00000589964 FOXO4P98177 505 aa21.52■■□□□ 1.04
CROCCP3-203ENST00000589964 CDCA7LQ96GN5 454 aa21.52■■□□□ 1.04
CROCCP3-203ENST00000589964 PLA2G12BQ9BX93 195 aa21.52■■□□□ 1.04
CROCCP3-203ENST00000589964 MYH16Q9H6N6 1097 aa21.52■■□□□ 1.04
CROCCP3-203ENST00000589964 XDHP47989 1333 aa21.52■■□□□ 1.03
CROCCP3-203ENST00000589964 ITGA6P23229 1130 aa21.51■■□□□ 1.03
CROCCP3-203ENST00000589964 CHMP4AQ9BY43 222 aa21.51■■□□□ 1.03
CROCCP3-203ENST00000589964 PGAP2Q9UHJ9 254 aa21.51■■□□□ 1.03
CROCCP3-203ENST00000589964 RASSF10A6NK89 507 aa21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 CSF1RP07333 972 aa21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 RBM26Q5T8P6 1007 aaKnown RBP21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 EYA3Q99504 573 aa21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 ZC3H12CQ9C0D7 883 aaKnown RBP21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 BSDC1Q9NW68 430 aaPredicted RBP21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
CROCCP3-203ENST00000589964 FOXN1O15353 648 aa21.49■■□□□ 1.03
CROCCP3-203ENST00000589964 VIL1P09327 827 aaKnown RBP21.49■■□□□ 1.03
CROCCP3-203ENST00000589964 CDC5LQ99459 802 aaKnown RBP21.49■■□□□ 1.03
CROCCP3-203ENST00000589964 ABT1Q9ULW3 272 aaKnown RBP21.49■■□□□ 1.03
CROCCP3-203ENST00000589964 TRPM7Q96QT4 1865 aa21.49■■□□□ 1.03
CROCCP3-203ENST00000589964 ADM5C9JUS6 153 aa21.48■■□□□ 1.03
CROCCP3-203ENST00000589964 HSP90B1P14625 803 aaKnown RBP21.48■■□□□ 1.03
CROCCP3-203ENST00000589964 PSME4Q14997 1843 aa21.48■■□□□ 1.03
CROCCP3-203ENST00000589964 A0A1B0GUL6 1792 aa21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 CYP4F22Q6NT55 531 aa21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 USP48Q86UV5 1035 aa21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 HELBQ8NG08 1087 aaPredicted RBP21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 DPF2Q92785 391 aa21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 ZNF594Q96JF6 807 aaPredicted RBP21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 GMLQ99445 158 aa21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 SCAF8Q9UPN6 1271 aaKnown RBP21.47■■□□□ 1.03
CROCCP3-203ENST00000589964 CELF2O95319 508 aaKnown RBP21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 ATP2B4P23634 1241 aa21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 CCT4P50991 539 aaKnown RBP21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 DEFB115Q30KQ5 88 aa21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 MRPL50Q8N5N7 158 aaKnown RBP21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 ZNF408Q9H9D4 720 aa21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 IRS2Q9Y4H2 1338 aa21.46■■□□□ 1.03
CROCCP3-203ENST00000589964 POLR2AP24928 1970 aaKnown RBP21.45■■□□□ 1.02
CROCCP3-203ENST00000589964 H7C1D1 291 aa21.45■■□□□ 1.02
CROCCP3-203ENST00000589964 GRM1Q13255 1194 aa21.45■■□□□ 1.02
CROCCP3-203ENST00000589964 SLC4A10Q6U841 1118 aa21.45■■□□□ 1.02
CROCCP3-203ENST00000589964 MED23Q9ULK4 1368 aa21.45■■□□□ 1.02
CROCCP3-203ENST00000589964 THSD7BQ9C0I4 1608 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 AOC2O75106 756 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 SLFN5Q08AF3 891 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 KIF4BQ2VIQ3 1234 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 RSBN1LQ6PCB5 846 aaPredicted RBP21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 LMBR1LQ6UX01 489 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 SSH1Q8WYL5 1049 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 SUCLG2Q96I99 432 aa21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 WDR33Q9C0J8 1336 aaKnown RBP21.44■■□□□ 1.02
CROCCP3-203ENST00000589964 GRM8O00222 908 aa21.43■■□□□ 1.02
CROCCP3-203ENST00000589964 TAF5LO75529 589 aa21.43■■□□□ 1.02
CROCCP3-203ENST00000589964 CHRNDQ07001 517 aa21.43■■□□□ 1.02
CROCCP3-203ENST00000589964 CAPNS2Q96L46 248 aa21.43■■□□□ 1.02
CROCCP3-203ENST00000589964 TLL2Q9Y6L7 1015 aa21.43■■□□□ 1.02
CROCCP3-203ENST00000589964 NBPF7P0C2Y1 421 aaPredicted RBP21.42■■□□□ 1.02
CROCCP3-203ENST00000589964 RPS12P25398 132 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms