RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TNN	Q9UQP3	1299 aa		21.9	■■□□□ 1.1
MBD1-221	ENST00000589867	CEP350	Q5VT06	3117 aa		21.9	■■□□□ 1.1
MBD1-221	ENST00000589867		A0A1B0GUL6	1792 aa		21.89	■■□□□ 1.1
MBD1-221	ENST00000589867	GPC2	Q8N158	579 aa		21.89	■■□□□ 1.09
MBD1-221	ENST00000589867	ANKRD44	Q8N8A2	993 aa		21.89	■■□□□ 1.09
MBD1-221	ENST00000589867	C6orf229	H3BNL8	230 aa		21.88	■■□□□ 1.09
MBD1-221	ENST00000589867	RIMBP2	O15034	1052 aa		21.88	■■□□□ 1.09
MBD1-221	ENST00000589867	POTEI	P0CG38	1075 aa		21.88	■■□□□ 1.09
MBD1-221	ENST00000589867	POTEJ	P0CG39	1038 aa		21.88	■■□□□ 1.09
MBD1-221	ENST00000589867	WASHC4	Q2M389	1173 aa		21.88	■■□□□ 1.09
MBD1-221	ENST00000589867	RABL6	Q3YEC7	729 aa	Predicted RBP	21.88	■■□□□ 1.09
MBD1-221	ENST00000589867	XDH	P47989	1333 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	UFL1	O94874	794 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	SCNN1D	P51172	638 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	EIF6	P56537	245 aa	Known RBP	21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	ARHGAP45	Q92619	1136 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	TAF1D	Q9H5J8	278 aa	Predicted RBP	21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	BICC1	Q9H694	974 aa	Known RBP	21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	KCNQ5	Q9NR82	932 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	ANKIB1	Q9P2G1	1089 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	GGA1	Q9UJY5	639 aa		21.87	■■□□□ 1.09
MBD1-221	ENST00000589867	ZNF594	Q96JF6	807 aa	Predicted RBP	21.86	■■□□□ 1.09
MBD1-221	ENST00000589867	API5	Q9BZZ5	524 aa	Known RBP	21.86	■■□□□ 1.09
MBD1-221	ENST00000589867	DBNDD1	Q9H9R9	158 aa		21.86	■■□□□ 1.09
MBD1-221	ENST00000589867	GJA3	Q9Y6H8	435 aa		21.86	■■□□□ 1.09
MBD1-221	ENST00000589867	ADAMTSL1	Q8N6G6	1762 aa		21.86	■■□□□ 1.09
MBD1-221	ENST00000589867	ANKRD18B	A2A2Z9	1011 aa		21.85	■■□□□ 1.09
MBD1-221	ENST00000589867	IGHMBP2	P38935	993 aa	Known RBP	21.85	■■□□□ 1.09
MBD1-221	ENST00000589867	DOK7	Q18PE1	504 aa		21.85	■■□□□ 1.09
MBD1-221	ENST00000589867	KIF16B	Q96L93	1317 aa		21.84	■■□□□ 1.09
MBD1-221	ENST00000589867	RAD17	O75943	681 aa		21.84	■■□□□ 1.09
MBD1-221	ENST00000589867	TRIM27	P14373	513 aa		21.84	■■□□□ 1.09
MBD1-221	ENST00000589867	ATP2B4	P23634	1241 aa		21.84	■■□□□ 1.09
MBD1-221	ENST00000589867	CCT4	P50991	539 aa	Known RBP	21.84	■■□□□ 1.09
MBD1-221	ENST00000589867	IFIT5	Q13325	482 aa	Known RBP	21.84	■■□□□ 1.09
MBD1-221	ENST00000589867	IRS2	Q9Y4H2	1338 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	SNAP23	O00161	211 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	KLRK1	P26718	216 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	CHRND	Q07001	517 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	TXNRD3	Q86VQ6	643 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	C16orf71	Q8IYS4	520 aa	Predicted RBP	21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	EYA3	Q99504	573 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	HACL1	Q9UJ83	578 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	CHMP3	Q9Y3E7	222 aa		21.83	■■□□□ 1.09
MBD1-221	ENST00000589867	ZNF646	O15015	1829 aa	Predicted RBP	21.83	■■□□□ 1.08
MBD1-221	ENST00000589867	ECE2	O60344	883 aa		21.82	■■□□□ 1.08
MBD1-221	ENST00000589867	EPS15	P42566	896 aa		21.82	■■□□□ 1.08
MBD1-221	ENST00000589867	INTS3	Q68E01	1043 aa	Known RBP	21.82	■■□□□ 1.08
MBD1-221	ENST00000589867	CIAPIN1	Q6FI81	312 aa		21.82	■■□□□ 1.08
MBD1-221	ENST00000589867	MPHOSPH8	Q99549	860 aa		21.82	■■□□□ 1.08
MBD1-221	ENST00000589867	PSME4	Q14997	1843 aa		21.82	■■□□□ 1.08
MBD1-221	ENST00000589867	IQCA1L	A6NCM1	817 aa		21.81	■■□□□ 1.08
MBD1-221	ENST00000589867	HSPA6	P17066	643 aa		21.81	■■□□□ 1.08
MBD1-221	ENST00000589867	EPHX2	P34913	555 aa		21.81	■■□□□ 1.08
MBD1-221	ENST00000589867	FSTL1	Q12841	308 aa		21.81	■■□□□ 1.08
MBD1-221	ENST00000589867	PUS3	Q9BZE2	481 aa	Known RBP	21.81	■■□□□ 1.08
MBD1-221	ENST00000589867	ZC3H12C	Q9C0D7	883 aa	Known RBP	21.81	■■□□□ 1.08
MBD1-221	ENST00000589867	MED23	Q9ULK4	1368 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	SHTN1	A0MZ66	631 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	PSMD14	O00487	310 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	GMPS	P49915	693 aa	Predicted RBP	21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	CCDC57	Q2TAC2	916 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	ATF7IP	Q6VMQ6	1270 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	SMC1B	Q8NDV3	1235 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	HELB	Q8NG08	1087 aa	Predicted RBP	21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	MEIS3	Q99687	375 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	LEMD3	Q9Y2U8	911 aa		21.8	■■□□□ 1.08
MBD1-221	ENST00000589867	TAF5L	O75529	589 aa		21.79	■■□□□ 1.08
MBD1-221	ENST00000589867	RFX5	P48382	616 aa	Predicted RBP	21.79	■■□□□ 1.08
MBD1-221	ENST00000589867	GPRC5D	Q9NZD1	345 aa		21.79	■■□□□ 1.08
MBD1-221	ENST00000589867	FRAT1	Q92837	279 aa	Predicted RBP	21.78	■■□□□ 1.08
MBD1-221	ENST00000589867	ANKRD2	Q9GZV1	360 aa		21.78	■■□□□ 1.08
MBD1-221	ENST00000589867	ZBTB12	Q9Y330	459 aa	Predicted RBP	21.78	■■□□□ 1.08
MBD1-221	ENST00000589867	RIPOR2	Q9Y4F9	1068 aa		21.78	■■□□□ 1.08
MBD1-221	ENST00000589867	ZNF804B	A4D1E1	1349 aa		21.78	■■□□□ 1.08
MBD1-221	ENST00000589867	LDHAL6A	Q6ZMR3	332 aa		21.77	■■□□□ 1.08
MBD1-221	ENST00000589867	KLHDC4	Q8TBB5	520 aa		21.77	■■□□□ 1.08
MBD1-221	ENST00000589867	IPO8	O15397	1037 aa	Known RBP	21.76	■■□□□ 1.07
MBD1-221	ENST00000589867	VIL1	P09327	827 aa	Known RBP	21.76	■■□□□ 1.07
MBD1-221	ENST00000589867	TNIP1	Q15025	636 aa		21.76	■■□□□ 1.07
MBD1-221	ENST00000589867	CHADL	Q6NUI6	762 aa		21.76	■■□□□ 1.07
MBD1-221	ENST00000589867	LDHD	Q86WU2	507 aa		21.76	■■□□□ 1.07
MBD1-221	ENST00000589867	CLUAP1	Q96AJ1	413 aa		21.76	■■□□□ 1.07
MBD1-221	ENST00000589867	UBTFL1	P0CB47	393 aa	Predicted RBP	21.75	■■□□□ 1.07
MBD1-221	ENST00000589867	LRRC24	Q50LG9	513 aa		21.75	■■□□□ 1.07
MBD1-221	ENST00000589867	C15orf52	Q6ZUT6	534 aa	Known RBP	21.75	■■□□□ 1.07
MBD1-221	ENST00000589867	LRRFIP2	Q9Y608	721 aa	Known RBP	21.75	■■□□□ 1.07
MBD1-221	ENST00000589867	RLBP1	P12271	317 aa		21.74	■■□□□ 1.07
MBD1-221	ENST00000589867	HIRA	P54198	1017 aa	Predicted RBP	21.74	■■□□□ 1.07
MBD1-221	ENST00000589867	EAPP	Q56P03	285 aa	Predicted RBP	21.74	■■□□□ 1.07
MBD1-221	ENST00000589867	ZKSCAN2	Q63HK3	967 aa		21.74	■■□□□ 1.07
MBD1-221	ENST00000589867	TMEM57	Q8N5G2	664 aa		21.74	■■□□□ 1.07
MBD1-221	ENST00000589867	CNNM1	Q9NRU3	951 aa		21.74	■■□□□ 1.07
MBD1-221	ENST00000589867	ZNF609	O15014	1411 aa		21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	ITGBL1	O95965	494 aa	Predicted RBP	21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	LMOD1	P29536	600 aa	Predicted RBP	21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	PTPN12	Q05209	780 aa	Known RBP	21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	TAF7L	Q5H9L4	462 aa		21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	VGLL2	Q8N8G2	317 aa		21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	TRPM4	Q8TD43	1214 aa		21.73	■■□□□ 1.07

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms