RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 G2E3Q7L622 706 aa13.24□□□□□ -0.29
SDF2-208ENST00000589788 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
SDF2-208ENST00000589788 RBM17Q96I25 401 aaKnown RBP13.24□□□□□ -0.29
SDF2-208ENST00000589788 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
SDF2-208ENST00000589788 RASSF7Q02833 373 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 SLFN5Q08AF3 891 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 FLIIQ13045 1269 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
SDF2-208ENST00000589788 C9orf131Q5VYM1 1079 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 SYNE4Q8N205 404 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 SBF1O95248 1867 aa13.23□□□□□ -0.29
SDF2-208ENST00000589788 ADCY9O60503 1353 aa13.22□□□□□ -0.29
SDF2-208ENST00000589788 LAMB2P55268 1798 aa13.22□□□□□ -0.29
SDF2-208ENST00000589788 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
SDF2-208ENST00000589788 CCDC93Q567U6 631 aa13.22□□□□□ -0.29
SDF2-208ENST00000589788 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
SDF2-208ENST00000589788 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
SDF2-208ENST00000589788 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
SDF2-208ENST00000589788 FER1L6Q2WGJ9 1857 aa13.22□□□□□ -0.29
SDF2-208ENST00000589788 HSP90B1P14625 803 aaKnown RBP13.21□□□□□ -0.29
SDF2-208ENST00000589788 LMNB1P20700 586 aa13.21□□□□□ -0.29
SDF2-208ENST00000589788 ZBTB38Q8NAP3 1195 aaPredicted RBP13.21□□□□□ -0.29
SDF2-208ENST00000589788 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
SDF2-208ENST00000589788 CDCA7LQ96GN5 454 aa13.21□□□□□ -0.29
SDF2-208ENST00000589788 CRAMP1Q96RY5 1269 aa13.21□□□□□ -0.29
SDF2-208ENST00000589788 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
SDF2-208ENST00000589788 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
SDF2-208ENST00000589788 DDX60Q8IY21 1712 aaKnown RBP13.21□□□□□ -0.3
SDF2-208ENST00000589788 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
SDF2-208ENST00000589788 NFKBIEO00221 500 aa13.2□□□□□ -0.3
SDF2-208ENST00000589788 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
SDF2-208ENST00000589788 OSBPP22059 807 aa13.2□□□□□ -0.3
SDF2-208ENST00000589788 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
SDF2-208ENST00000589788 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
SDF2-208ENST00000589788 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
SDF2-208ENST00000589788 PTCD2Q8WV60 388 aaKnown RBP13.2□□□□□ -0.3
SDF2-208ENST00000589788 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
SDF2-208ENST00000589788 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
SDF2-208ENST00000589788 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
SDF2-208ENST00000589788 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
SDF2-208ENST00000589788 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
SDF2-208ENST00000589788 PCCAP05165 728 aaPredicted RBP13.19□□□□□ -0.3
SDF2-208ENST00000589788 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
SDF2-208ENST00000589788 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
SDF2-208ENST00000589788 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
SDF2-208ENST00000589788 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
SDF2-208ENST00000589788 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
SDF2-208ENST00000589788 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
SDF2-208ENST00000589788 ABCC4O15439 1325 aa13.18□□□□□ -0.3
SDF2-208ENST00000589788 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
SDF2-208ENST00000589788 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
SDF2-208ENST00000589788 SLC34A2O95436 690 aa13.17□□□□□ -0.3
SDF2-208ENST00000589788 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
SDF2-208ENST00000589788 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
SDF2-208ENST00000589788 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
SDF2-208ENST00000589788 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
SDF2-208ENST00000589788 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
SDF2-208ENST00000589788 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
SDF2-208ENST00000589788 JARID2Q92833 1246 aaPredicted RBP13.17□□□□□ -0.3
SDF2-208ENST00000589788 TIAM2Q8IVF5 1701 aa13.17□□□□□ -0.3
SDF2-208ENST00000589788 F6X3S4 739 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 EVI5O60447 810 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 PDE8AO60658 829 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 BBOX1O75936 387 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 PRELPP51888 382 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 GRAPQ13588 217 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
SDF2-208ENST00000589788 DICER1Q9UPY3 1922 aaKnown RBP13.16□□□□□ -0.3
SDF2-208ENST00000589788 TAF1P21675 1872 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
SDF2-208ENST00000589788 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
SDF2-208ENST00000589788 GCKRQ14397 625 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 DDX12PQ92771 950 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 ATP6V0A2Q9Y487 856 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 UTRNP46939 3433 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
SDF2-208ENST00000589788 ALDH1L2Q3SY69 923 aa13.14□□□□□ -0.31
SDF2-208ENST00000589788 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
SDF2-208ENST00000589788 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
SDF2-208ENST00000589788 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
SDF2-208ENST00000589788 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
SDF2-208ENST00000589788 PSMD1Q99460 953 aa13.14□□□□□ -0.31
SDF2-208ENST00000589788 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
SDF2-208ENST00000589788 MYH3P11055 1940 aa13.14□□□□□ -0.31
SDF2-208ENST00000589788 H7C1W4 665 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 PTPRCP08575 1304 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 TBC1D12O60347 775 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
SDF2-208ENST00000589788 CTSWP56202 376 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
SDF2-208ENST00000589788 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
SDF2-208ENST00000589788 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
SDF2-208ENST00000589788 GLTPD2A6NH11 291 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms