RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 CCDC194A0A1B0GVG4 234 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 FAM160A1Q05DH4 1040 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 CBX8Q9HC52 389 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 NDUFAB1O14561 156 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 TMEM63CQ9P1W3 806 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 ZMYM4Q5VZL5 1548 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 NLRP5P59047 1200 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 RASAL2Q9UJF2 1139 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 CEP83Q9Y592 693 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 CHMLP26374 656 aa16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-214ENST00000589677 AKR1B15C9JRZ8 316 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 DESP17661 470 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 CLNS1AP54105 237 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 Q6ZUG5 572 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 SAMD15Q9P1V8 674 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 RAPGEF6Q8TEU7 1601 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 MYO1BO43795 1136 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 GUCA1BQ9UMX6 200 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 LACTBP83111 547 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 NAPGQ99747 312 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-214ENST00000589677 GPATCH8Q9UKJ3 1502 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 TTF2Q9UNY4 1162 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 UBA7P41226 1012 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 GPR161Q8N6U8 529 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 CTNNBL1Q8WYA6 563 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 ALG1Q9BT22 464 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 GOLGA6CA6NDK9 693 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 GOLGA6DP0CG33 693 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 HSP90AA4PQ58FG1 418 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 METTL24Q5JXM2 366 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 CEP85Q6P2H3 762 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 CAPZA3Q96KX2 299 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 GOLGA6AQ9NYA3 693 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 CATIPQ7Z7H3 387 aa16.62■□□□□ 0.25
SMARCA4-214ENST00000589677 NUP160Q12769 1436 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 ELP1O95163 1332 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 BRD3Q15059 726 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 CCDC82Q8N4S0 544 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 CCDC77Q9BR77 488 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 TSGA10Q9BZW7 698 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 TSC1Q92574 1164 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 NUDT16Q96DE0 195 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 SLC26A6Q9BXS9 759 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
SMARCA4-214ENST00000589677 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 MYD88Q99836 296 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 PSMA7O14818 248 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 ARHGAP6O43182 974 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 PRPHP41219 470 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 FMNL3Q8IVF7 1028 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 TCEANC2Q96MN5 208 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 EXOC1Q9NV70 894 aa16.6■□□□□ 0.25
SMARCA4-214ENST00000589677 BRD1O95696 1058 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 CCDC172P0C7W6 258 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 AFMP43652 599 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 TNNC1P63316 161 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 MICU3Q86XE3 530 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 RAD50Q92878 1312 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 FANCAO15360 1455 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 CREB3L3Q68CJ9 461 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 WDR66Q8TBY9 1149 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 MINDY4BA8MYZ0 360 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 SELENOSQ9BQE4 189 aa16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-214ENST00000589677 CETN1Q12798 172 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms